RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 LRP1BQ9NZR2 4599 aa3.66□□□□□ -1.82
RPGRIP1-204ENST00000553927 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
RPGRIP1-204ENST00000553927 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
RPGRIP1-204ENST00000553927 DYNC2H1Q8NCM8 4307 aaKnown RBP3.65□□□□□ -1.82
RPGRIP1-204ENST00000553927 KRTAP1-4P0C5Y4 121 aa3.64□□□□□ -1.83
RPGRIP1-204ENST00000553927 KRTAP13-4Q3LI77 160 aa3.62□□□□□ -1.83
RPGRIP1-204ENST00000553927 DNAH5Q8TE73 4624 aa3.61□□□□□ -1.83
RPGRIP1-204ENST00000553927 KRTAP10-1P60331 282 aa3.61□□□□□ -1.83
RPGRIP1-204ENST00000553927 VPS13BQ7Z7G8 4022 aa3.6□□□□□ -1.83
RPGRIP1-204ENST00000553927 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
RPGRIP1-204ENST00000553927 FAT2Q9NYQ8 4349 aa3.59□□□□□ -1.83
RPGRIP1-204ENST00000553927 RPL37P61927 97 aaKnown RBP3.59□□□□□ -1.84
RPGRIP1-204ENST00000553927 PRKDCP78527 4128 aaKnown RBP3.59□□□□□ -1.84
RPGRIP1-204ENST00000553927 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
RPGRIP1-204ENST00000553927 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
RPGRIP1-204ENST00000553927 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
RPGRIP1-204ENST00000553927 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
RPGRIP1-204ENST00000553927 SMR3BP02814 79 aaPredicted RBP3.53□□□□□ -1.84
RPGRIP1-204ENST00000553927 KRTAP12-2P59991 146 aa3.52□□□□□ -1.85
RPGRIP1-204ENST00000553927 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
RPGRIP1-204ENST00000553927 S4R3F8 94 aa3.5□□□□□ -1.85
RPGRIP1-204ENST00000553927 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
RPGRIP1-204ENST00000553927 PKD1P98161 4303 aa3.48□□□□□ -1.85
RPGRIP1-204ENST00000553927 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
RPGRIP1-204ENST00000553927 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
RPGRIP1-204ENST00000553927 PKHD1P08F94 4074 aa3.47□□□□□ -1.85
RPGRIP1-204ENST00000553927 KRTAP10-8P60410 259 aa3.45□□□□□ -1.86
RPGRIP1-204ENST00000553927 FAT1Q14517 4588 aa3.44□□□□□ -1.86
RPGRIP1-204ENST00000553927 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
RPGRIP1-204ENST00000553927 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
RPGRIP1-204ENST00000553927 MYCBP2O75592 4640 aa3.4□□□□□ -1.86
RPGRIP1-204ENST00000553927 RPS29P62273 56 aaKnown RBP3.39□□□□□ -1.87
RPGRIP1-204ENST00000553927 SACSQ9NZJ4 4579 aa3.38□□□□□ -1.87
RPGRIP1-204ENST00000553927 HSPG2P98160 4391 aa3.38□□□□□ -1.87
RPGRIP1-204ENST00000553927 DYNC1H1Q14204 4646 aaKnown RBP3.36□□□□□ -1.87
RPGRIP1-204ENST00000553927 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
RPGRIP1-204ENST00000553927 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
RPGRIP1-204ENST00000553927 KRTAP19-1Q8IUB9 90 aa3.35□□□□□ -1.87
RPGRIP1-204ENST00000553927 LPAP08519 4548 aa3.33□□□□□ -1.88
RPGRIP1-204ENST00000553927 LRP1Q07954 4544 aaKnown RBP3.33□□□□□ -1.88
RPGRIP1-204ENST00000553927 APOBP04114 4563 aaKnown RBP3.33□□□□□ -1.88
RPGRIP1-204ENST00000553927 PKHD1L1Q86WI1 4243 aa3.33□□□□□ -1.88
RPGRIP1-204ENST00000553927 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
RPGRIP1-204ENST00000553927 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
RPGRIP1-204ENST00000553927 M0QZ58 72 aa3.29□□□□□ -1.88
RPGRIP1-204ENST00000553927 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
RPGRIP1-204ENST00000553927 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
RPGRIP1-204ENST00000553927 FAT3Q8TDW7 4589 aa3.28□□□□□ -1.88
RPGRIP1-204ENST00000553927 KRTAP10-4P60372 401 aaPredicted RBP3.28□□□□□ -1.88
RPGRIP1-204ENST00000553927 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
RPGRIP1-204ENST00000553927 KRTAP9-8Q9BYQ0 159 aa3.27□□□□□ -1.89
RPGRIP1-204ENST00000553927 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
RPGRIP1-204ENST00000553927 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
RPGRIP1-204ENST00000553927 R4GN34 69 aa3.23□□□□□ -1.89
RPGRIP1-204ENST00000553927 RYR3Q15413 4870 aa3.23□□□□□ -1.89
RPGRIP1-204ENST00000553927 CAMK2N1Q7Z7J9 78 aa3.22□□□□□ -1.89
RPGRIP1-204ENST00000553927 TNXBP22105 4242 aa3.2□□□□□ -1.9
RPGRIP1-204ENST00000553927 LRP2P98164 4655 aa3.2□□□□□ -1.9
RPGRIP1-204ENST00000553927 BIRC6Q9NR09 4857 aa3.2□□□□□ -1.9
RPGRIP1-204ENST00000553927 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
RPGRIP1-204ENST00000553927 RYR2Q92736 4967 aa3.16□□□□□ -1.9
RPGRIP1-204ENST00000553927 KRTAP9-7A8MTY7 169 aa3.15□□□□□ -1.91
RPGRIP1-204ENST00000553927 A0A1B0GVY2 172 aa3.14□□□□□ -1.91
RPGRIP1-204ENST00000553927 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
RPGRIP1-204ENST00000553927 Q5VSD8 79 aa3.12□□□□□ -1.91
RPGRIP1-204ENST00000553927 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
RPGRIP1-204ENST00000553927 RYR1P21817 5038 aa3.1□□□□□ -1.91
RPGRIP1-204ENST00000553927 KRTAP4-5Q9BYR2 181 aa3.09□□□□□ -1.91
RPGRIP1-204ENST00000553927 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
RPGRIP1-204ENST00000553927 HERC2O95714 4834 aa3.05□□□□□ -1.92
RPGRIP1-204ENST00000553927 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
RPGRIP1-204ENST00000553927 ABCA13Q86UQ4 5058 aa3.03□□□□□ -1.93
RPGRIP1-204ENST00000553927 MT1HL1P0DM35 61 aa3.02□□□□□ -1.93
RPGRIP1-204ENST00000553927 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
RPGRIP1-204ENST00000553927 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
RPGRIP1-204ENST00000553927 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
RPGRIP1-204ENST00000553927 MUC2Q02817 5179 aa2.97□□□□□ -1.93
RPGRIP1-204ENST00000553927 KRTAP4-1Q9BYQ7 146 aa2.97□□□□□ -1.93
RPGRIP1-204ENST00000553927 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
RPGRIP1-204ENST00000553927 TNP1P09430 55 aa2.96□□□□□ -1.94
RPGRIP1-204ENST00000553927 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
RPGRIP1-204ENST00000553927 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
RPGRIP1-204ENST00000553927 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
RPGRIP1-204ENST00000553927 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
RPGRIP1-204ENST00000553927 KRTAP19-2Q3LHN2 52 aa2.83□□□□□ -1.96
RPGRIP1-204ENST00000553927 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
RPGRIP1-204ENST00000553927 HERC1Q15751 4861 aa2.79□□□□□ -1.96
RPGRIP1-204ENST00000553927 INE1O15225 51 aa2.78□□□□□ -1.97
RPGRIP1-204ENST00000553927 FLGP20930 4061 aaPredicted RBP2.75□□□□□ -1.97
RPGRIP1-204ENST00000553927 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
RPGRIP1-204ENST00000553927 M0R2T5 61 aa2.68□□□□□ -1.98
RPGRIP1-204ENST00000553927 UBR4Q5T4S7 5183 aa2.65□□□□□ -1.98
RPGRIP1-204ENST00000553927 KRTAP12-3P60328 96 aa2.65□□□□□ -1.98
RPGRIP1-204ENST00000553927 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
RPGRIP1-204ENST00000553927 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.98
RPGRIP1-204ENST00000553927 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
RPGRIP1-204ENST00000553927 KRTAP10-10P60014 251 aa2.63□□□□□ -1.99
RPGRIP1-204ENST00000553927 KRTAP10-12P60413 245 aa2.63□□□□□ -1.99
RPGRIP1-204ENST00000553927 RNF213Q63HN8 5207 aa2.62□□□□□ -1.99
RPGRIP1-204ENST00000553927 MT1FP04733 61 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms