RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 NDUFC1O43677 76 aa5.08□□□□□ -1.6
HNRNPC-208ENST00000553753 H7BZZ5 65 aa5.07□□□□□ -1.6
HNRNPC-208ENST00000553753 NDUFS5O43920 106 aa5.07□□□□□ -1.6
HNRNPC-208ENST00000553753 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
HNRNPC-208ENST00000553753 Q8N9L7 120 aa5.06□□□□□ -1.6
HNRNPC-208ENST00000553753 LINC00846Q9NV44 126 aa5.06□□□□□ -1.6
HNRNPC-208ENST00000553753 UBL5Q9BZL1 73 aa5.05□□□□□ -1.6
HNRNPC-208ENST00000553753 TRAV7A0A075B6U4 112 aa5.04□□□□□ -1.6
HNRNPC-208ENST00000553753 WFDC13Q8IUB5 93 aa5.04□□□□□ -1.6
HNRNPC-208ENST00000553753 CASC2Q6XLA1 102 aa5.03□□□□□ -1.6
HNRNPC-208ENST00000553753 Q5W150 140 aa5□□□□□ -1.61
HNRNPC-208ENST00000553753 C20orf197Q8N268 126 aa5□□□□□ -1.61
HNRNPC-208ENST00000553753 A0A087WVE0 104 aa4.99□□□□□ -1.61
HNRNPC-208ENST00000553753 HCG22E2RYF7 251 aa4.99□□□□□ -1.61
HNRNPC-208ENST00000553753 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
HNRNPC-208ENST00000553753 MT2AP02795 61 aa4.99□□□□□ -1.61
HNRNPC-208ENST00000553753 IGKV2D-30A0A075B6S6 120 aa4.98□□□□□ -1.61
HNRNPC-208ENST00000553753 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
HNRNPC-208ENST00000553753 BRK1Q8WUW1 75 aa4.98□□□□□ -1.61
HNRNPC-208ENST00000553753 CXCL6P80162 114 aa4.96□□□□□ -1.61
HNRNPC-208ENST00000553753 C7orf65Q6ZTY9 151 aa4.96□□□□□ -1.61
HNRNPC-208ENST00000553753 MT1FP04733 61 aa4.95□□□□□ -1.62
HNRNPC-208ENST00000553753 KRTAP10-10P60014 251 aa4.94□□□□□ -1.62
HNRNPC-208ENST00000553753 H1FX-AS1Q4G0G2 97 aa4.93□□□□□ -1.62
HNRNPC-208ENST00000553753 USH2AO75445 5202 aa4.93□□□□□ -1.62
HNRNPC-208ENST00000553753 Q1T7F1 81 aa4.91□□□□□ -1.62
HNRNPC-208ENST00000553753 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
HNRNPC-208ENST00000553753 TP53AIP1Q9HCN2 124 aa4.9□□□□□ -1.63
HNRNPC-208ENST00000553753 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
HNRNPC-208ENST00000553753 SNURFQ9Y675 71 aa4.85□□□□□ -1.63
HNRNPC-208ENST00000553753 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
HNRNPC-208ENST00000553753 KTN1-AS1Q86SY8 53 aa4.81□□□□□ -1.64
HNRNPC-208ENST00000553753 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
HNRNPC-208ENST00000553753 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
HNRNPC-208ENST00000553753 CYP4F30PQ9H0H9 118 aa4.79□□□□□ -1.64
HNRNPC-208ENST00000553753 TRAV22A0A0B4J277 110 aa4.78□□□□□ -1.64
HNRNPC-208ENST00000553753 S4R3F8 94 aa4.77□□□□□ -1.65
HNRNPC-208ENST00000553753 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
HNRNPC-208ENST00000553753 LOC101927531A0A1B0GV80 90 aa4.76□□□□□ -1.65
HNRNPC-208ENST00000553753 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
HNRNPC-208ENST00000553753 CSAG1Q6PB30 78 aa4.74□□□□□ -1.65
HNRNPC-208ENST00000553753 LCA10Q71F78 164 aa4.74□□□□□ -1.65
HNRNPC-208ENST00000553753 H0Y9P7 68 aa4.71□□□□□ -1.66
HNRNPC-208ENST00000553753 Q5VV11 94 aa4.69□□□□□ -1.66
HNRNPC-208ENST00000553753 A6NN06 94 aa4.68□□□□□ -1.66
HNRNPC-208ENST00000553753 KRTAP19-6Q3LI70 58 aa4.68□□□□□ -1.66
HNRNPC-208ENST00000553753 MACF1Q9UPN3 7388 aaKnown RBP4.68□□□□□ -1.66
HNRNPC-208ENST00000553753 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
HNRNPC-208ENST00000553753 LINC00208Q96KT6 92 aa4.65□□□□□ -1.66
HNRNPC-208ENST00000553753 PSPHP1O15172 72 aa4.65□□□□□ -1.67
HNRNPC-208ENST00000553753 A8MUN3 132 aa4.64□□□□□ -1.67
HNRNPC-208ENST00000553753 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
HNRNPC-208ENST00000553753 MP68P56378 58 aa4.63□□□□□ -1.67
HNRNPC-208ENST00000553753 H3BPC8 53 aa4.63□□□□□ -1.67
HNRNPC-208ENST00000553753 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
HNRNPC-208ENST00000553753 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
HNRNPC-208ENST00000553753 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
HNRNPC-208ENST00000553753 CHKB-CPT1BH3BT56 60 aa4.6□□□□□ -1.67
HNRNPC-208ENST00000553753 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
HNRNPC-208ENST00000553753 A8MU10 97 aa4.55□□□□□ -1.68
HNRNPC-208ENST00000553753 MT1BP07438 61 aa4.55□□□□□ -1.68
HNRNPC-208ENST00000553753 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
HNRNPC-208ENST00000553753 CRIPTQ9P021 101 aa4.55□□□□□ -1.68
HNRNPC-208ENST00000553753 H0YAA0 97 aa4.55□□□□□ -1.68
HNRNPC-208ENST00000553753 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
HNRNPC-208ENST00000553753 SPTSSBQ8NFR3 76 aa4.53□□□□□ -1.68
HNRNPC-208ENST00000553753 PRR15LQ9BU68 103 aa4.53□□□□□ -1.68
HNRNPC-208ENST00000553753 A6NED7 52 aa4.53□□□□□ -1.69
HNRNPC-208ENST00000553753 H3BS24 57 aa4.51□□□□□ -1.69
HNRNPC-208ENST00000553753 ADM2Q7Z4H4 148 aa4.5□□□□□ -1.69
HNRNPC-208ENST00000553753 LINC01554Q52M75 96 aa4.49□□□□□ -1.69
HNRNPC-208ENST00000553753 DMAC1Q96GE9 116 aa4.49□□□□□ -1.69
HNRNPC-208ENST00000553753 COA5Q86WW8 74 aa4.45□□□□□ -1.7
HNRNPC-208ENST00000553753 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
HNRNPC-208ENST00000553753 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
HNRNPC-208ENST00000553753 ACYP2P14621 99 aa4.4□□□□□ -1.7
HNRNPC-208ENST00000553753 P0C880 135 aa4.4□□□□□ -1.71
HNRNPC-208ENST00000553753 R4GN34 69 aa4.39□□□□□ -1.71
HNRNPC-208ENST00000553753 M0QZ58 72 aa4.35□□□□□ -1.71
HNRNPC-208ENST00000553753 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
HNRNPC-208ENST00000553753 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
HNRNPC-208ENST00000553753 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
HNRNPC-208ENST00000553753 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
HNRNPC-208ENST00000553753 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
HNRNPC-208ENST00000553753 MT1XP80297 61 aa4.29□□□□□ -1.72
HNRNPC-208ENST00000553753 NEBP20929 6669 aa4.28□□□□□ -1.72
HNRNPC-208ENST00000553753 KMT2DO14686 5537 aa4.28□□□□□ -1.72
HNRNPC-208ENST00000553753 KRTAP5-9P26371 169 aa4.25□□□□□ -1.73
HNRNPC-208ENST00000553753 UQCR11O14957 56 aa4.22□□□□□ -1.73
HNRNPC-208ENST00000553753 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
HNRNPC-208ENST00000553753 MIR22HGQ0VDD5 57 aa4.2□□□□□ -1.74
HNRNPC-208ENST00000553753 ROMO1P60602 79 aa4.19□□□□□ -1.74
HNRNPC-208ENST00000553753 A0A1B0GU69 56 aa4.19□□□□□ -1.74
HNRNPC-208ENST00000553753 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
HNRNPC-208ENST00000553753 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
HNRNPC-208ENST00000553753 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
HNRNPC-208ENST00000553753 KRTAP8-1Q8IUC2 63 aa4.13□□□□□ -1.75
HNRNPC-208ENST00000553753 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
HNRNPC-208ENST00000553753 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
HNRNPC-208ENST00000553753 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms