RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 FAM236CP0DP71 79 aa2.42□□□□□ -2.02
ATXN3-222ENST00000553570 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
ATXN3-222ENST00000553570 IMUPQ9GZP8 106 aa2.42□□□□□ -2.02
ATXN3-222ENST00000553570 C8orf17Q9NRJ1 99 aa2.42□□□□□ -2.02
ATXN3-222ENST00000553570 IGKV3D-7A0A0C4DH55 119 aa2.41□□□□□ -2.02
ATXN3-222ENST00000553570 MT-ATP8P03928 68 aa2.41□□□□□ -2.02
ATXN3-222ENST00000553570 WFDC13Q8IUB5 93 aa2.41□□□□□ -2.02
ATXN3-222ENST00000553570 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
ATXN3-222ENST00000553570 PRR15Q8IV56 129 aa2.4□□□□□ -2.03
ATXN3-222ENST00000553570 LINC00846Q9NV44 126 aa2.4□□□□□ -2.03
ATXN3-222ENST00000553570 RNF213Q63HN8 5207 aa2.39□□□□□ -2.03
ATXN3-222ENST00000553570 hDV103S1A0JD37 113 aa2.39□□□□□ -2.03
ATXN3-222ENST00000553570 K7EQZ3 153 aa2.39□□□□□ -2.03
ATXN3-222ENST00000553570 ZCCHC13Q8WW36 166 aaKnown RBP2.39□□□□□ -2.03
ATXN3-222ENST00000553570 MRPL34Q9BQ48 92 aaKnown RBP2.39□□□□□ -2.03
ATXN3-222ENST00000553570 RBM12B-AS1Q9P1G2 102 aa2.39□□□□□ -2.03
ATXN3-222ENST00000553570 Q5W150 140 aa2.38□□□□□ -2.03
ATXN3-222ENST00000553570 CASC2Q6XLA1 102 aa2.38□□□□□ -2.03
ATXN3-222ENST00000553570 MMP24-AS1A0A0U1RRL7 71 aa2.37□□□□□ -2.03
ATXN3-222ENST00000553570 FAM236AA0A1B0GUQ0 79 aa2.37□□□□□ -2.03
ATXN3-222ENST00000553570 FAM236BA0A1B0GV22 79 aa2.37□□□□□ -2.03
ATXN3-222ENST00000553570 HCG22E2RYF7 251 aa2.37□□□□□ -2.03
ATXN3-222ENST00000553570 SPINK7P58062 85 aa2.37□□□□□ -2.03
ATXN3-222ENST00000553570 TMEM254Q8TBM7 123 aa2.37□□□□□ -2.03
ATXN3-222ENST00000553570 ANAPC13Q9BS18 74 aa2.37□□□□□ -2.03
ATXN3-222ENST00000553570 ATOX1O00244 68 aa2.36□□□□□ -2.03
ATXN3-222ENST00000553570 HIST1H4AP62805 103 aaKnown RBP2.36□□□□□ -2.03
ATXN3-222ENST00000553570 MT1HP80294 61 aa2.36□□□□□ -2.03
ATXN3-222ENST00000553570 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
ATXN3-222ENST00000553570 KRTAP19-2Q3LHN2 52 aa2.34□□□□□ -2.03
ATXN3-222ENST00000553570 C5orf47Q569G3 176 aa2.34□□□□□ -2.03
ATXN3-222ENST00000553570 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
ATXN3-222ENST00000553570 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
ATXN3-222ENST00000553570 SMIM20Q8N5G0 67 aa2.34□□□□□ -2.03
ATXN3-222ENST00000553570 MUC2Q02817 5179 aa2.34□□□□□ -2.04
ATXN3-222ENST00000553570 A0A087WVE0 104 aa2.33□□□□□ -2.04
ATXN3-222ENST00000553570 SMIM26A0A096LP01 95 aa2.33□□□□□ -2.04
ATXN3-222ENST00000553570 HRES1P13985 223 aa2.33□□□□□ -2.04
ATXN3-222ENST00000553570 UQCRQO14949 82 aa2.31□□□□□ -2.04
ATXN3-222ENST00000553570 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
ATXN3-222ENST00000553570 COX7CP15954 63 aa2.3□□□□□ -2.04
ATXN3-222ENST00000553570 C4orf26Q17RF5 130 aa2.3□□□□□ -2.04
ATXN3-222ENST00000553570 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
ATXN3-222ENST00000553570 SERP2Q8N6R1 65 aa2.3□□□□□ -2.04
ATXN3-222ENST00000553570 TRAV7A0A075B6U4 112 aa2.29□□□□□ -2.04
ATXN3-222ENST00000553570 TP53AIP1Q9HCN2 124 aa2.29□□□□□ -2.04
ATXN3-222ENST00000553570 FAT4Q6V0I7 4981 aa2.29□□□□□ -2.04
ATXN3-222ENST00000553570 H1FX-AS1Q4G0G2 97 aa2.28□□□□□ -2.04
ATXN3-222ENST00000553570 CCDC179H3BU77 68 aa2.27□□□□□ -2.05
ATXN3-222ENST00000553570 KRTAP10-10P60014 251 aa2.26□□□□□ -2.05
ATXN3-222ENST00000553570 C1orf64Q8NEQ6 169 aa2.26□□□□□ -2.05
ATXN3-222ENST00000553570 H0Y9P7 68 aa2.25□□□□□ -2.05
ATXN3-222ENST00000553570 NDUFC1O43677 76 aa2.25□□□□□ -2.05
ATXN3-222ENST00000553570 TMEM258P61165 79 aa2.25□□□□□ -2.05
ATXN3-222ENST00000553570 KLKP1Q107X0 134 aa2.25□□□□□ -2.05
ATXN3-222ENST00000553570 C20orf197Q8N268 126 aa2.25□□□□□ -2.05
ATXN3-222ENST00000553570 TRAV22A0A0B4J277 110 aa2.24□□□□□ -2.05
ATXN3-222ENST00000553570 SPRR5A0A1B0GTR4 108 aa2.24□□□□□ -2.05
ATXN3-222ENST00000553570 H3BPC8 53 aa2.24□□□□□ -2.05
ATXN3-222ENST00000553570 MP68P56378 58 aa2.24□□□□□ -2.05
ATXN3-222ENST00000553570 LINC00208Q96KT6 92 aa2.24□□□□□ -2.05
ATXN3-222ENST00000553570 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
ATXN3-222ENST00000553570 ATP5EP56381 51 aaPredicted RBP2.23□□□□□ -2.05
ATXN3-222ENST00000553570 S4R3F8 94 aa2.23□□□□□ -2.05
ATXN3-222ENST00000553570 LOC101927531A0A1B0GV80 90 aa2.22□□□□□ -2.05
ATXN3-222ENST00000553570 MT2AP02795 61 aa2.21□□□□□ -2.06
ATXN3-222ENST00000553570 CSAG1Q6PB30 78 aa2.21□□□□□ -2.06
ATXN3-222ENST00000553570 SNURFQ9Y675 71 aa2.21□□□□□ -2.06
ATXN3-222ENST00000553570 FLGP20930 4061 aaPredicted RBP2.21□□□□□ -2.06
ATXN3-222ENST00000553570 H7BZZ5 65 aa2.2□□□□□ -2.06
ATXN3-222ENST00000553570 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
ATXN3-222ENST00000553570 SPANXA2-OT1Q8N9U9 137 aa2.2□□□□□ -2.06
ATXN3-222ENST00000553570 CRCT1Q9UGL9 99 aa2.2□□□□□ -2.06
ATXN3-222ENST00000553570 PSPHP1O15172 72 aa2.19□□□□□ -2.06
ATXN3-222ENST00000553570 MT1FP04733 61 aa2.19□□□□□ -2.06
ATXN3-222ENST00000553570 LCA10Q71F78 164 aa2.19□□□□□ -2.06
ATXN3-222ENST00000553570 CYSTM1Q9H1C7 97 aa2.19□□□□□ -2.06
ATXN3-222ENST00000553570 RPS28P62857 69 aaKnown RBP2.17□□□□□ -2.06
ATXN3-222ENST00000553570 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
ATXN3-222ENST00000553570 SERP1Q9Y6X1 66 aa2.16□□□□□ -2.06
ATXN3-222ENST00000553570 A8MUN3 132 aa2.13□□□□□ -2.07
ATXN3-222ENST00000553570 V9GYY9 64 aa2.13□□□□□ -2.07
ATXN3-222ENST00000553570 ACYP2P14621 99 aa2.12□□□□□ -2.07
ATXN3-222ENST00000553570 ADM2Q7Z4H4 148 aa2.12□□□□□ -2.07
ATXN3-222ENST00000553570 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
ATXN3-222ENST00000553570 CHKB-CPT1BH3BT56 60 aa2.11□□□□□ -2.07
ATXN3-222ENST00000553570 COA5Q86WW8 74 aa2.09□□□□□ -2.07
ATXN3-222ENST00000553570 DMAC1Q96GE9 116 aa2.09□□□□□ -2.07
ATXN3-222ENST00000553570 Q5VV11 94 aa2.08□□□□□ -2.08
ATXN3-222ENST00000553570 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
ATXN3-222ENST00000553570 SPTSSBQ8NFR3 76 aa2.08□□□□□ -2.08
ATXN3-222ENST00000553570 PRO0628Q9UI54 55 aa2.07□□□□□ -2.08
ATXN3-222ENST00000553570 LINC01554Q52M75 96 aa2.06□□□□□ -2.08
ATXN3-222ENST00000553570 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
ATXN3-222ENST00000553570 M0QZ58 72 aa2.05□□□□□ -2.08
ATXN3-222ENST00000553570 Q1T7F1 81 aa2.05□□□□□ -2.08
ATXN3-222ENST00000553570 R4GN34 69 aa2.05□□□□□ -2.08
ATXN3-222ENST00000553570 A6NN06 94 aa2.04□□□□□ -2.08
ATXN3-222ENST00000553570 H0YAA0 97 aa2.04□□□□□ -2.08
ATXN3-222ENST00000553570 P0C880 135 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms