RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
HNRNPC-205ENST00000553300 CYP4F30PQ9H0H9 118 aa6.1□□□□□ -1.43
HNRNPC-205ENST00000553300 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.43
HNRNPC-205ENST00000553300 LOC101927531A0A1B0GV80 90 aa6.08□□□□□ -1.44
HNRNPC-205ENST00000553300 HIST1H4AP62805 103 aaKnown RBP6.06□□□□□ -1.44
HNRNPC-205ENST00000553300 LCA10Q71F78 164 aa6.06□□□□□ -1.44
HNRNPC-205ENST00000553300 FAM236AA0A1B0GUQ0 79 aa6.06□□□□□ -1.44
HNRNPC-205ENST00000553300 FAM236BA0A1B0GV22 79 aa6.06□□□□□ -1.44
HNRNPC-205ENST00000553300 UQCRQO14949 82 aa6.05□□□□□ -1.44
HNRNPC-205ENST00000553300 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
HNRNPC-205ENST00000553300 ATOX1O00244 68 aa6.04□□□□□ -1.44
HNRNPC-205ENST00000553300 SCGB1A1P11684 91 aa6.04□□□□□ -1.44
HNRNPC-205ENST00000553300 K7ERU9 68 aa6.03□□□□□ -1.44
HNRNPC-205ENST00000553300 LINC00643Q86TS7 51 aa6.03□□□□□ -1.44
HNRNPC-205ENST00000553300 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
HNRNPC-205ENST00000553300 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
HNRNPC-205ENST00000553300 H0Y9P7 68 aa5.98□□□□□ -1.45
HNRNPC-205ENST00000553300 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
HNRNPC-205ENST00000553300 A0A087WVE0 104 aa5.94□□□□□ -1.46
HNRNPC-205ENST00000553300 KLKP1Q107X0 134 aa5.94□□□□□ -1.46
HNRNPC-205ENST00000553300 A8MUN3 132 aa5.93□□□□□ -1.46
HNRNPC-205ENST00000553300 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
HNRNPC-205ENST00000553300 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
HNRNPC-205ENST00000553300 Q5VV11 94 aa5.92□□□□□ -1.46
HNRNPC-205ENST00000553300 J3QR89 54 aa5.91□□□□□ -1.46
HNRNPC-205ENST00000553300 NDUFC1O43677 76 aa5.91□□□□□ -1.46
HNRNPC-205ENST00000553300 MP68P56378 58 aa5.91□□□□□ -1.46
HNRNPC-205ENST00000553300 IMUPQ9GZP8 106 aa5.91□□□□□ -1.46
HNRNPC-205ENST00000553300 CRIPTQ9P021 101 aa5.91□□□□□ -1.46
HNRNPC-205ENST00000553300 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.47
HNRNPC-205ENST00000553300 LINC00208Q96KT6 92 aa5.9□□□□□ -1.47
HNRNPC-205ENST00000553300 OCR1Q9BZK8 76 aa5.89□□□□□ -1.47
HNRNPC-205ENST00000553300 MT1BP07438 61 aa5.87□□□□□ -1.47
HNRNPC-205ENST00000553300 H0YAA0 97 aa5.86□□□□□ -1.47
HNRNPC-205ENST00000553300 A6NN06 94 aa5.84□□□□□ -1.47
HNRNPC-205ENST00000553300 H3BPC8 53 aa5.83□□□□□ -1.48
HNRNPC-205ENST00000553300 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
HNRNPC-205ENST00000553300 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
HNRNPC-205ENST00000553300 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
HNRNPC-205ENST00000553300 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
HNRNPC-205ENST00000553300 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
HNRNPC-205ENST00000553300 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
HNRNPC-205ENST00000553300 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
HNRNPC-205ENST00000553300 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
HNRNPC-205ENST00000553300 R4GN34 69 aa5.65□□□□□ -1.51
HNRNPC-205ENST00000553300 TRAV7A0A075B6U4 112 aa5.63□□□□□ -1.51
HNRNPC-205ENST00000553300 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
HNRNPC-205ENST00000553300 MT-ATP8P03928 68 aa5.62□□□□□ -1.51
HNRNPC-205ENST00000553300 ACYP2P14621 99 aa5.61□□□□□ -1.51
HNRNPC-205ENST00000553300 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
HNRNPC-205ENST00000553300 ANAPC13Q9BS18 74 aa5.61□□□□□ -1.51
HNRNPC-205ENST00000553300 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
HNRNPC-205ENST00000553300 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
HNRNPC-205ENST00000553300 P0C880 135 aa5.6□□□□□ -1.51
HNRNPC-205ENST00000553300 SPTSSBQ8NFR3 76 aa5.57□□□□□ -1.52
HNRNPC-205ENST00000553300 M0QZ58 72 aa5.56□□□□□ -1.52
HNRNPC-205ENST00000553300 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
HNRNPC-205ENST00000553300 NEBP20929 6669 aa5.53□□□□□ -1.52
HNRNPC-205ENST00000553300 MT1XP80297 61 aa5.51□□□□□ -1.53
HNRNPC-205ENST00000553300 KMT2DO14686 5537 aa5.5□□□□□ -1.53
HNRNPC-205ENST00000553300 CHKB-CPT1BH3BT56 60 aa5.49□□□□□ -1.53
HNRNPC-205ENST00000553300 RPS28P62857 69 aaKnown RBP5.47□□□□□ -1.53
HNRNPC-205ENST00000553300 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
HNRNPC-205ENST00000553300 SNURFQ9Y675 71 aa5.47□□□□□ -1.53
HNRNPC-205ENST00000553300 SPANXA2-OT1Q8N9U9 137 aa5.46□□□□□ -1.54
HNRNPC-205ENST00000553300 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
HNRNPC-205ENST00000553300 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
HNRNPC-205ENST00000553300 KRTAP12-2P59991 146 aa5.42□□□□□ -1.54
HNRNPC-205ENST00000553300 SERP2Q8N6R1 65 aa5.42□□□□□ -1.54
HNRNPC-205ENST00000553300 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
HNRNPC-205ENST00000553300 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
HNRNPC-205ENST00000553300 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
HNRNPC-205ENST00000553300 TMEM258P61165 79 aa5.32□□□□□ -1.56
HNRNPC-205ENST00000553300 COX7CP15954 63 aa5.29□□□□□ -1.56
HNRNPC-205ENST00000553300 SPRR2EP22531 72 aa5.28□□□□□ -1.56
HNRNPC-205ENST00000553300 SPRR2BP35325 72 aa5.28□□□□□ -1.56
HNRNPC-205ENST00000553300 SPRR2AP35326 72 aa5.28□□□□□ -1.56
HNRNPC-205ENST00000553300 PRO0628Q9UI54 55 aa5.28□□□□□ -1.56
HNRNPC-205ENST00000553300 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
HNRNPC-205ENST00000553300 COA5Q86WW8 74 aa5.26□□□□□ -1.57
HNRNPC-205ENST00000553300 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
HNRNPC-205ENST00000553300 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
HNRNPC-205ENST00000553300 SEC61GP60059 68 aa5.24□□□□□ -1.57
HNRNPC-205ENST00000553300 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
HNRNPC-205ENST00000553300 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.58
HNRNPC-205ENST00000553300 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
HNRNPC-205ENST00000553300 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
HNRNPC-205ENST00000553300 V9GYY9 64 aa5.2□□□□□ -1.58
HNRNPC-205ENST00000553300 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
HNRNPC-205ENST00000553300 H7BZZ5 65 aa5.16□□□□□ -1.58
HNRNPC-205ENST00000553300 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
HNRNPC-205ENST00000553300 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
HNRNPC-205ENST00000553300 A0A1B0GU33 70 aa5.11□□□□□ -1.59
HNRNPC-205ENST00000553300 ATP5EP56381 51 aaPredicted RBP5.11□□□□□ -1.59
HNRNPC-205ENST00000553300 SPRR2DP22532 72 aa5.1□□□□□ -1.59
HNRNPC-205ENST00000553300 CYSTM1Q9H1C7 97 aa5.1□□□□□ -1.59
HNRNPC-205ENST00000553300 A0A0D9SG42 100 aa5.08□□□□□ -1.6
HNRNPC-205ENST00000553300 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
HNRNPC-205ENST00000553300 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
HNRNPC-205ENST00000553300 SPATA8Q6RVD6 105 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms