RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 BIRC6Q9NR09 4857 aa12.36□□□□□ -0.43
NPAS3-211ENST00000551634 MYCBP2O75592 4640 aa12.35□□□□□ -0.43
NPAS3-211ENST00000551634 RYR1P21817 5038 aa12.34□□□□□ -0.43
NPAS3-211ENST00000551634 K7ERS5 55 aa12.31□□□□□ -0.44
NPAS3-211ENST00000551634 KRTAP17-1Q9BYP8 105 aa12.31□□□□□ -0.44
NPAS3-211ENST00000551634 KRTAP25-1Q3LHN0 102 aa12.29□□□□□ -0.44
NPAS3-211ENST00000551634 ABCA13Q86UQ4 5058 aa12.27□□□□□ -0.45
NPAS3-211ENST00000551634 PCLOQ9Y6V0 5065 aa12.25□□□□□ -0.45
NPAS3-211ENST00000551634 FAT3Q8TDW7 4589 aa12.2□□□□□ -0.46
NPAS3-211ENST00000551634 LRP1Q07954 4544 aaKnown RBP12.19□□□□□ -0.46
NPAS3-211ENST00000551634 KRTAP10-8P60410 259 aa12.18□□□□□ -0.46
NPAS3-211ENST00000551634 RPL37P61927 97 aaKnown RBP12.18□□□□□ -0.46
NPAS3-211ENST00000551634 KRTAP3-3Q9BYR6 98 aa12.17□□□□□ -0.46
NPAS3-211ENST00000551634 KRTAP10-6P60371 365 aaPredicted RBP12.15□□□□□ -0.46
NPAS3-211ENST00000551634 KRTAP4-5Q9BYR2 181 aa12.12□□□□□ -0.47
NPAS3-211ENST00000551634 HERC2O95714 4834 aa12.12□□□□□ -0.47
NPAS3-211ENST00000551634 TNXBP22105 4242 aa12.08□□□□□ -0.48
NPAS3-211ENST00000551634 XP32Q5T750 250 aa12.05□□□□□ -0.48
NPAS3-211ENST00000551634 S4R3F8 94 aa12.05□□□□□ -0.48
NPAS3-211ENST00000551634 KRTAP3-2Q9BYR7 98 aa12.04□□□□□ -0.48
NPAS3-211ENST00000551634 ROMO1P60602 79 aa12.03□□□□□ -0.48
NPAS3-211ENST00000551634 KRTAP13-4Q3LI77 160 aa12□□□□□ -0.49
NPAS3-211ENST00000551634 DMBT1Q9UGM3 2413 aaPredicted RBP11.99□□□□□ -0.49
NPAS3-211ENST00000551634 Q5VSD8 79 aa11.96□□□□□ -0.49
NPAS3-211ENST00000551634 HERC1Q15751 4861 aa11.94□□□□□ -0.5
NPAS3-211ENST00000551634 CRIPTQ9P021 101 aa11.9□□□□□ -0.5
NPAS3-211ENST00000551634 A0A0D9SG42 100 aa11.89□□□□□ -0.51
NPAS3-211ENST00000551634 P0C880 135 aa11.84□□□□□ -0.51
NPAS3-211ENST00000551634 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
NPAS3-211ENST00000551634 TPRXLQ17RH7 258 aa11.67□□□□□ -0.54
NPAS3-211ENST00000551634 KRTAP12-2P59991 146 aa11.63□□□□□ -0.55
NPAS3-211ENST00000551634 KRTAP12-1P59990 96 aa11.59□□□□□ -0.55
NPAS3-211ENST00000551634 M0QZ58 72 aa11.58□□□□□ -0.56
NPAS3-211ENST00000551634 A0A0A0MQY5 61 aa11.52□□□□□ -0.57
NPAS3-211ENST00000551634 SPINT4Q6UDR6 99 aa11.51□□□□□ -0.57
NPAS3-211ENST00000551634 C10orf95Q9H7T3 257 aa11.5□□□□□ -0.57
NPAS3-211ENST00000551634 LPAP08519 4548 aa11.43□□□□□ -0.58
NPAS3-211ENST00000551634 LRP2P98164 4655 aa11.38□□□□□ -0.59
NPAS3-211ENST00000551634 UBR4Q5T4S7 5183 aa11.35□□□□□ -0.59
NPAS3-211ENST00000551634 J3QL48 77 aa11.32□□□□□ -0.6
NPAS3-211ENST00000551634 RNF213Q63HN8 5207 aa11.27□□□□□ -0.61
NPAS3-211ENST00000551634 MUC2Q02817 5179 aa11.26□□□□□ -0.61
NPAS3-211ENST00000551634 KRTAP15-1Q3LI76 137 aa11.24□□□□□ -0.61
NPAS3-211ENST00000551634 HMCN2Q8NDA2 5059 aa11.2□□□□□ -0.62
NPAS3-211ENST00000551634 R4GN34 69 aa11.19□□□□□ -0.62
NPAS3-211ENST00000551634 SEC61BP60468 96 aaKnown RBP11.14□□□□□ -0.63
NPAS3-211ENST00000551634 MUC17Q685J3 4493 aa10.98□□□□□ -0.65
NPAS3-211ENST00000551634 NDUFAF8A1L188 74 aa10.96□□□□□ -0.66
NPAS3-211ENST00000551634 LORP23490 312 aaPredicted RBP10.93□□□□□ -0.66
NPAS3-211ENST00000551634 KRTAP4-1Q9BYQ7 146 aa10.88□□□□□ -0.67
NPAS3-211ENST00000551634 KRTAP19-2Q3LHN2 52 aa10.79□□□□□ -0.68
NPAS3-211ENST00000551634 FAT4Q6V0I7 4981 aa10.72□□□□□ -0.69
NPAS3-211ENST00000551634 PLAC4Q8WY50 150 aa10.69□□□□□ -0.7
NPAS3-211ENST00000551634 PP632Q6XCG6 107 aa10.67□□□□□ -0.7
NPAS3-211ENST00000551634 CAMK2N1Q7Z7J9 78 aa10.63□□□□□ -0.71
NPAS3-211ENST00000551634 FLGP20930 4061 aaPredicted RBP10.46□□□□□ -0.74
NPAS3-211ENST00000551634 KRTAP23-1A1A580 65 aa10.32□□□□□ -0.76
NPAS3-211ENST00000551634 TNP1P09430 55 aa10.31□□□□□ -0.76
NPAS3-211ENST00000551634 LUZP6Q538Z0 58 aa10.26□□□□□ -0.77
NPAS3-211ENST00000551634 SPRR2GQ9BYE4 73 aa10.06□□□□□ -0.8
NPAS3-211ENST00000551634 LCE2CQ5TA81 110 aa10.04□□□□□ -0.8
NPAS3-211ENST00000551634 SPRR5A0A1B0GTR4 108 aa9.99□□□□□ -0.81
NPAS3-211ENST00000551634 KRTAP19-1Q8IUB9 90 aa9.94□□□□□ -0.82
NPAS3-211ENST00000551634 FSIP2Q5CZC0 6907 aa9.94□□□□□ -0.82
NPAS3-211ENST00000551634 M0R2T5 61 aa9.79□□□□□ -0.84
NPAS3-211ENST00000551634 MT1HP80294 61 aa9.75□□□□□ -0.85
NPAS3-211ENST00000551634 LCE3AQ5TA76 89 aa9.67□□□□□ -0.86
NPAS3-211ENST00000551634 MT2AP02795 61 aa9.66□□□□□ -0.86
NPAS3-211ENST00000551634 MT1FP04733 61 aa9.64□□□□□ -0.87
NPAS3-211ENST00000551634 KRTAP10-10P60014 251 aa9.64□□□□□ -0.87
NPAS3-211ENST00000551634 KRTAP19-8Q3LI54 63 aa9.59□□□□□ -0.87
NPAS3-211ENST00000551634 KRTAP9-8Q9BYQ0 159 aa9.58□□□□□ -0.88
NPAS3-211ENST00000551634 USH2AO75445 5202 aa9.57□□□□□ -0.88
NPAS3-211ENST00000551634 KRTAP8-1Q8IUC2 63 aa9.52□□□□□ -0.89
NPAS3-211ENST00000551634 LCE2AQ5TA79 106 aaPredicted RBP9.46□□□□□ -0.89
NPAS3-211ENST00000551634 MT1BP07438 61 aa9.4□□□□□ -0.9
NPAS3-211ENST00000551634 KRTAP10-5P60370 271 aa9.4□□□□□ -0.91
NPAS3-211ENST00000551634 MT1XP80297 61 aa9.37□□□□□ -0.91
NPAS3-211ENST00000551634 KRTAP10-12P60413 245 aa9.26□□□□□ -0.93
NPAS3-211ENST00000551634 KRTAP12-3P60328 96 aa9.24□□□□□ -0.93
NPAS3-211ENST00000551634 KRTAP9-3Q9BYQ3 159 aa9.17□□□□□ -0.94
NPAS3-211ENST00000551634 KRTAP10-7P60409 375 aaPredicted RBP9.09□□□□□ -0.95
NPAS3-211ENST00000551634 PRO2289Q9P1D8 64 aa9.06□□□□□ -0.96
NPAS3-211ENST00000551634 SSPOA2VEC9 5147 aa8.98□□□□□ -0.97
NPAS3-211ENST00000551634 INE1O15225 51 aa8.96□□□□□ -0.98
NPAS3-211ENST00000551634 KRTAP9-2Q9BYQ4 174 aa8.95□□□□□ -0.98
NPAS3-211ENST00000551634 LCE2BO14633 110 aa8.78□□□□□ -1
NPAS3-211ENST00000551634 KRTAP19-5Q3LI72 72 aa8.75□□□□□ -1.01
NPAS3-211ENST00000551634 LCE3CQ5T5A8 94 aa8.72□□□□□ -1.01
NPAS3-211ENST00000551634 FCGBPQ9Y6R7 5405 aaPredicted RBP8.61□□□□□ -1.03
NPAS3-211ENST00000551634 KMT2DO14686 5537 aa8.59□□□□□ -1.03
NPAS3-211ENST00000551634 SYNE2Q8WXH0 6885 aaKnown RBP8.55□□□□□ -1.04
NPAS3-211ENST00000551634 MACF1Q9UPN3 7388 aaKnown RBP8.52□□□□□ -1.04
NPAS3-211ENST00000551634 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
NPAS3-211ENST00000551634 CRCT1Q9UGL9 99 aa8.45□□□□□ -1.06
NPAS3-211ENST00000551634 KRTAP4-8A0A0G2JLE6 195 aa8.45□□□□□ -1.06
NPAS3-211ENST00000551634 KRTAP4-8Q9BYQ9 185 aa8.45□□□□□ -1.06
NPAS3-211ENST00000551634 KRTAP19-4Q3LI73 84 aa8.38□□□□□ -1.07
NPAS3-211ENST00000551634 KRTAP9-6A8MVA2 160 aa8.36□□□□□ -1.07
NPAS3-211ENST00000551634 KRTAP19-7Q3SYF9 63 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms