RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 DMXL2Q8TDJ6 3036 aa1.02□□□□□ -2.25
GNPTAB-208ENST00000550718 MKI67P46013 3256 aaKnown RBP1.01□□□□□ -2.25
GNPTAB-208ENST00000550718 RANBP2P49792 3224 aaKnown RBP1.01□□□□□ -2.25
GNPTAB-208ENST00000550718 DMXL1Q9Y485 3027 aa1.01□□□□□ -2.25
GNPTAB-208ENST00000550718 NBEAL1Q6ZS30 2694 aa1.01□□□□□ -2.25
GNPTAB-208ENST00000550718 LYSTQ99698 3801 aa1.01□□□□□ -2.25
GNPTAB-208ENST00000550718 ZANQ9Y493 2812 aa1.01□□□□□ -2.25
GNPTAB-208ENST00000550718 NBEAL2Q6ZNJ1 2754 aa1.01□□□□□ -2.25
GNPTAB-208ENST00000550718 PKD1L1Q8TDX9 2849 aa1□□□□□ -2.25
GNPTAB-208ENST00000550718 HIVEP1P15822 2718 aa1□□□□□ -2.25
GNPTAB-208ENST00000550718 MYO9AB2RTY4 2548 aa1□□□□□ -2.25
GNPTAB-208ENST00000550718 ANK2Q01484 3957 aa1□□□□□ -2.25
GNPTAB-208ENST00000550718 NOTCH1P46531 2555 aa1□□□□□ -2.25
GNPTAB-208ENST00000550718 SACSQ9NZJ4 4579 aa0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 FASNP49327 2511 aaKnown RBP0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 KALRNO60229 2985 aa0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 FBN2P35556 2912 aa0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 PDZD2O15018 2839 aa0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 SRCAPQ6ZRS2 3230 aa0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 DNAH3Q8TD57 4116 aa0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 ANKRD11Q6UB99 2663 aaPredicted RBP0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 DYNC2H1Q8NCM8 4307 aaKnown RBP0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 MAST4O15021 2626 aa0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 FLNAP21333 2647 aaKnown RBP0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 CEP295Q9C0D2 2601 aa0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 UNC79Q9P2D8 2635 aa0.99□□□□□ -2.25
GNPTAB-208ENST00000550718 PRKDCP78527 4128 aaKnown RBP0.98□□□□□ -2.25
GNPTAB-208ENST00000550718 MYCBP2O75592 4640 aa0.98□□□□□ -2.25
GNPTAB-208ENST00000550718 KMT2AQ03164 3969 aa0.98□□□□□ -2.25
GNPTAB-208ENST00000550718 FLNBO75369 2602 aaKnown RBP0.98□□□□□ -2.25
GNPTAB-208ENST00000550718 VPS13AQ96RL7 3174 aa0.98□□□□□ -2.25
GNPTAB-208ENST00000550718 STAB2Q8WWQ8 2551 aa0.98□□□□□ -2.25
GNPTAB-208ENST00000550718 VPS13BQ7Z7G8 4022 aa0.97□□□□□ -2.25
GNPTAB-208ENST00000550718 TACC2O95359 2948 aa0.97□□□□□ -2.25
GNPTAB-208ENST00000550718 SZT2Q5T011 3432 aa0.97□□□□□ -2.25
GNPTAB-208ENST00000550718 DNAH8Q96JB1 4490 aa0.97□□□□□ -2.25
GNPTAB-208ENST00000550718 BOD1L1Q8NFC6 3051 aa0.97□□□□□ -2.25
GNPTAB-208ENST00000550718 CELSR3Q9NYQ7 3312 aa0.97□□□□□ -2.25
GNPTAB-208ENST00000550718 CFAP47Q6ZTR5 3102 aa0.96□□□□□ -2.26
GNPTAB-208ENST00000550718 HRNRQ86YZ3 2850 aaPredicted RBP0.96□□□□□ -2.26
GNPTAB-208ENST00000550718 MXRA5Q9NR99 2828 aa0.96□□□□□ -2.26
GNPTAB-208ENST00000550718 DMDP11532 3685 aa0.96□□□□□ -2.26
GNPTAB-208ENST00000550718 PRM1P04553 51 aa0.96□□□□□ -2.26
GNPTAB-208ENST00000550718 SMR3BP02814 79 aaPredicted RBP0.95□□□□□ -2.26
GNPTAB-208ENST00000550718 FREM2Q5SZK8 3169 aa0.95□□□□□ -2.26
GNPTAB-208ENST00000550718 ZNF469Q96JG9 3925 aaPredicted RBP0.95□□□□□ -2.26
GNPTAB-208ENST00000550718 ANK3Q12955 4377 aaKnown RBP0.94□□□□□ -2.26
GNPTAB-208ENST00000550718 WDFY4Q6ZS81 3184 aa0.94□□□□□ -2.26
GNPTAB-208ENST00000550718 FAT2Q9NYQ8 4349 aa0.94□□□□□ -2.26
GNPTAB-208ENST00000550718 MGAM2Q2M2H8 2515 aa0.93□□□□□ -2.26
GNPTAB-208ENST00000550718 DNAH2Q9P225 4427 aa0.93□□□□□ -2.26
GNPTAB-208ENST00000550718 IGSF10Q6WRI0 2623 aa0.93□□□□□ -2.26
GNPTAB-208ENST00000550718 TNXBP22105 4242 aa0.93□□□□□ -2.26
GNPTAB-208ENST00000550718 DNAH7Q8WXX0 4024 aa0.92□□□□□ -2.26
GNPTAB-208ENST00000550718 LAMA1P25391 3075 aa0.92□□□□□ -2.26
GNPTAB-208ENST00000550718 SMG1Q96Q15 3661 aaKnown RBP0.92□□□□□ -2.26
GNPTAB-208ENST00000550718 SPENQ96T58 3664 aaKnown RBP0.92□□□□□ -2.26
GNPTAB-208ENST00000550718 SPTBN5Q9NRC6 3674 aaKnown RBP0.92□□□□□ -2.26
GNPTAB-208ENST00000550718 LAMA5O15230 3695 aa0.92□□□□□ -2.26
GNPTAB-208ENST00000550718 SVEP1Q4LDE5 3571 aa0.91□□□□□ -2.26
GNPTAB-208ENST00000550718 EP400Q96L91 3159 aa0.91□□□□□ -2.26
GNPTAB-208ENST00000550718 MT1AP04731 61 aa0.91□□□□□ -2.26
GNPTAB-208ENST00000550718 CSMD1Q96PZ7 3565 aa0.91□□□□□ -2.26
GNPTAB-208ENST00000550718 DNAH1Q9P2D7 4330 aa0.91□□□□□ -2.26
GNPTAB-208ENST00000550718 ADGRG4Q8IZF6 3080 aa0.9□□□□□ -2.26
GNPTAB-208ENST00000550718 GOLGB1Q14789 3259 aaKnown RBP0.9□□□□□ -2.27
GNPTAB-208ENST00000550718 RELNP78509 3460 aa0.9□□□□□ -2.27
GNPTAB-208ENST00000550718 DNAH10Q8IVF4 4471 aa0.89□□□□□ -2.27
GNPTAB-208ENST00000550718 FRAS1Q86XX4 4008 aa0.89□□□□□ -2.27
GNPTAB-208ENST00000550718 CMYA5Q8N3K9 4069 aa0.89□□□□□ -2.27
GNPTAB-208ENST00000550718 CUBNO60494 3623 aa0.88□□□□□ -2.27
GNPTAB-208ENST00000550718 FLGP20930 4061 aaPredicted RBP0.88□□□□□ -2.27
GNPTAB-208ENST00000550718 DNAH9Q9NYC9 4486 aa0.88□□□□□ -2.27
GNPTAB-208ENST00000550718 DCHS1Q96JQ0 3298 aa0.88□□□□□ -2.27
GNPTAB-208ENST00000550718 UTRNP46939 3433 aa0.87□□□□□ -2.27
GNPTAB-208ENST00000550718 HSPG2P98160 4391 aa0.87□□□□□ -2.27
GNPTAB-208ENST00000550718 LAMA3Q16787 3333 aa0.87□□□□□ -2.27
GNPTAB-208ENST00000550718 PKD1P98161 4303 aa0.87□□□□□ -2.27
GNPTAB-208ENST00000550718 PKHD1L1Q86WI1 4243 aa0.87□□□□□ -2.27
GNPTAB-208ENST00000550718 HUWE1Q7Z6Z7 4374 aaKnown RBP0.87□□□□□ -2.27
GNPTAB-208ENST00000550718 KRTAP19-5Q3LI72 72 aa0.87□□□□□ -2.27
GNPTAB-208ENST00000550718 TRRAPQ9Y4A5 3859 aa0.86□□□□□ -2.27
GNPTAB-208ENST00000550718 SPEGQ15772 3267 aa0.86□□□□□ -2.27
GNPTAB-208ENST00000550718 FAT3Q8TDW7 4589 aa0.85□□□□□ -2.27
GNPTAB-208ENST00000550718 HECTD4Q9Y4D8 3996 aa0.84□□□□□ -2.27
GNPTAB-208ENST00000550718 DNAH6Q9C0G6 4158 aa0.84□□□□□ -2.27
GNPTAB-208ENST00000550718 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.28
GNPTAB-208ENST00000550718 AHNAKQ09666 5890 aaKnown RBP0.83□□□□□ -2.28
GNPTAB-208ENST00000550718 SPRR2BP35325 72 aa0.83□□□□□ -2.28
GNPTAB-208ENST00000550718 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
GNPTAB-208ENST00000550718 USP34Q70CQ2 3546 aa0.83□□□□□ -2.28
GNPTAB-208ENST00000550718 MUC3AQ02505 3323 aa0.83□□□□□ -2.28
GNPTAB-208ENST00000550718 LAMA2P24043 3122 aaKnown RBP0.82□□□□□ -2.28
GNPTAB-208ENST00000550718 SPRR2DP22532 72 aa0.82□□□□□ -2.28
GNPTAB-208ENST00000550718 SPRR2AP35326 72 aa0.82□□□□□ -2.28
GNPTAB-208ENST00000550718 DNAH17Q9UFH2 4485 aa0.81□□□□□ -2.28
GNPTAB-208ENST00000550718 VPS13CQ709C8 3753 aa0.81□□□□□ -2.28
GNPTAB-208ENST00000550718 LOC400499M0QZD8 3231 aa0.8□□□□□ -2.28
GNPTAB-208ENST00000550718 XIRP2A4UGR9 3374 aa0.8□□□□□ -2.28
GNPTAB-208ENST00000550718 PLECQ15149 4684 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms