RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 APOBP04114 4563 aaKnown RBP5.56□□□□□ -1.52
ERBB3-214ENST00000550070 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
ERBB3-214ENST00000550070 SMR3BP02814 79 aaPredicted RBP5.54□□□□□ -1.52
ERBB3-214ENST00000550070 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
ERBB3-214ENST00000550070 H0YAA0 97 aa5.53□□□□□ -1.52
ERBB3-214ENST00000550070 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
ERBB3-214ENST00000550070 KRTAP17-1Q9BYP8 105 aa5.5□□□□□ -1.53
ERBB3-214ENST00000550070 HSPG2P98160 4391 aa5.49□□□□□ -1.53
ERBB3-214ENST00000550070 A0A1B0GVY2 172 aa5.48□□□□□ -1.53
ERBB3-214ENST00000550070 A0A1B0GU33 70 aa5.47□□□□□ -1.53
ERBB3-214ENST00000550070 KRTAP10-4P60372 401 aaPredicted RBP5.46□□□□□ -1.54
ERBB3-214ENST00000550070 RYR1P21817 5038 aa5.46□□□□□ -1.54
ERBB3-214ENST00000550070 MYCBP2O75592 4640 aa5.45□□□□□ -1.54
ERBB3-214ENST00000550070 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
ERBB3-214ENST00000550070 LRP1Q07954 4544 aaKnown RBP5.44□□□□□ -1.54
ERBB3-214ENST00000550070 FLG2Q5D862 2391 aaPredicted RBP5.44□□□□□ -1.54
ERBB3-214ENST00000550070 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.54
ERBB3-214ENST00000550070 ABCA13Q86UQ4 5058 aa5.37□□□□□ -1.55
ERBB3-214ENST00000550070 CRIPTQ9P021 101 aa5.34□□□□□ -1.55
ERBB3-214ENST00000550070 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
ERBB3-214ENST00000550070 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
ERBB3-214ENST00000550070 TNXBP22105 4242 aa5.31□□□□□ -1.56
ERBB3-214ENST00000550070 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
ERBB3-214ENST00000550070 PCLOQ9Y6V0 5065 aa5.3□□□□□ -1.56
ERBB3-214ENST00000550070 BIRC6Q9NR09 4857 aa5.29□□□□□ -1.56
ERBB3-214ENST00000550070 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
ERBB3-214ENST00000550070 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
ERBB3-214ENST00000550070 HERC2O95714 4834 aa5.25□□□□□ -1.57
ERBB3-214ENST00000550070 KRTAP10-8P60410 259 aa5.25□□□□□ -1.57
ERBB3-214ENST00000550070 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
ERBB3-214ENST00000550070 RPL37P61927 97 aaKnown RBP5.24□□□□□ -1.57
ERBB3-214ENST00000550070 DMBT1Q9UGM3 2413 aaPredicted RBP5.24□□□□□ -1.57
ERBB3-214ENST00000550070 Q5VSD8 79 aa5.24□□□□□ -1.57
ERBB3-214ENST00000550070 A0A0D9SG42 100 aa5.21□□□□□ -1.58
ERBB3-214ENST00000550070 XP32Q5T750 250 aa5.21□□□□□ -1.58
ERBB3-214ENST00000550070 S4R3F8 94 aa5.2□□□□□ -1.58
ERBB3-214ENST00000550070 HERC1Q15751 4861 aa5.17□□□□□ -1.58
ERBB3-214ENST00000550070 TPRXLQ17RH7 258 aa5.16□□□□□ -1.58
ERBB3-214ENST00000550070 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
ERBB3-214ENST00000550070 R4GN34 69 aa5.12□□□□□ -1.59
ERBB3-214ENST00000550070 LPAP08519 4548 aa5.11□□□□□ -1.59
ERBB3-214ENST00000550070 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
ERBB3-214ENST00000550070 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
ERBB3-214ENST00000550070 MT1HL1P0DM35 61 aa5.05□□□□□ -1.6
ERBB3-214ENST00000550070 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
ERBB3-214ENST00000550070 LRP2P98164 4655 aa5.03□□□□□ -1.6
ERBB3-214ENST00000550070 MUC2Q02817 5179 aa4.99□□□□□ -1.61
ERBB3-214ENST00000550070 M0QZ58 72 aa4.96□□□□□ -1.62
ERBB3-214ENST00000550070 PLAC4Q8WY50 150 aa4.92□□□□□ -1.62
ERBB3-214ENST00000550070 RNF213Q63HN8 5207 aa4.92□□□□□ -1.62
ERBB3-214ENST00000550070 UBR4Q5T4S7 5183 aa4.91□□□□□ -1.62
ERBB3-214ENST00000550070 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.63
ERBB3-214ENST00000550070 MUC17Q685J3 4493 aa4.82□□□□□ -1.64
ERBB3-214ENST00000550070 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
ERBB3-214ENST00000550070 KRTAP4-1Q9BYQ7 146 aa4.77□□□□□ -1.65
ERBB3-214ENST00000550070 INE1O15225 51 aa4.76□□□□□ -1.65
ERBB3-214ENST00000550070 FAT4Q6V0I7 4981 aa4.76□□□□□ -1.65
ERBB3-214ENST00000550070 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
ERBB3-214ENST00000550070 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
ERBB3-214ENST00000550070 LCE2CQ5TA81 110 aa4.56□□□□□ -1.68
ERBB3-214ENST00000550070 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
ERBB3-214ENST00000550070 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
ERBB3-214ENST00000550070 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
ERBB3-214ENST00000550070 TNP1P09430 55 aa4.44□□□□□ -1.7
ERBB3-214ENST00000550070 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
ERBB3-214ENST00000550070 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
ERBB3-214ENST00000550070 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
ERBB3-214ENST00000550070 MT1HP80294 61 aa4.26□□□□□ -1.73
ERBB3-214ENST00000550070 FSIP2Q5CZC0 6907 aa4.26□□□□□ -1.73
ERBB3-214ENST00000550070 LCE2BO14633 110 aa4.25□□□□□ -1.73
ERBB3-214ENST00000550070 USH2AO75445 5202 aa4.23□□□□□ -1.73
ERBB3-214ENST00000550070 M0R2T5 61 aa4.23□□□□□ -1.73
ERBB3-214ENST00000550070 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
ERBB3-214ENST00000550070 MT1FP04733 61 aa4.19□□□□□ -1.74
ERBB3-214ENST00000550070 MT2AP02795 61 aa4.18□□□□□ -1.74
ERBB3-214ENST00000550070 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
ERBB3-214ENST00000550070 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.75
ERBB3-214ENST00000550070 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
ERBB3-214ENST00000550070 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
ERBB3-214ENST00000550070 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
ERBB3-214ENST00000550070 MT1BP07438 61 aa4.08□□□□□ -1.76
ERBB3-214ENST00000550070 MT1XP80297 61 aa4.07□□□□□ -1.76
ERBB3-214ENST00000550070 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
ERBB3-214ENST00000550070 KRTAP12-3P60328 96 aa4□□□□□ -1.77
ERBB3-214ENST00000550070 KRTAP10-12P60413 245 aa4□□□□□ -1.77
ERBB3-214ENST00000550070 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
ERBB3-214ENST00000550070 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
ERBB3-214ENST00000550070 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
ERBB3-214ENST00000550070 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
ERBB3-214ENST00000550070 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
ERBB3-214ENST00000550070 KMT2DO14686 5537 aa3.89□□□□□ -1.79
ERBB3-214ENST00000550070 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
ERBB3-214ENST00000550070 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
ERBB3-214ENST00000550070 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
ERBB3-214ENST00000550070 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
ERBB3-214ENST00000550070 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
ERBB3-214ENST00000550070 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
ERBB3-214ENST00000550070 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
ERBB3-214ENST00000550070 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
ERBB3-214ENST00000550070 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms