RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 SMIM20Q8N5G0 67 aa1.96□□□□□ -2.1
APAF1-208ENST00000549007 LOC110117498A0A087WWA1 95 aa1.96□□□□□ -2.1
APAF1-208ENST00000549007 RPS29P62273 56 aaKnown RBP1.96□□□□□ -2.1
APAF1-208ENST00000549007 SERP2Q8N6R1 65 aa1.96□□□□□ -2.1
APAF1-208ENST00000549007 Q96NJ1 140 aa1.96□□□□□ -2.1
APAF1-208ENST00000549007 RPS28P62857 69 aaKnown RBP1.96□□□□□ -2.1
APAF1-208ENST00000549007 IGKV4-1P06312 121 aa1.95□□□□□ -2.1
APAF1-208ENST00000549007 KRTAP13-3Q3SY46 172 aa1.95□□□□□ -2.1
APAF1-208ENST00000549007 IGKV3D-7A0A0C4DH55 119 aa1.95□□□□□ -2.1
APAF1-208ENST00000549007 Q5XG85 94 aa1.95□□□□□ -2.1
APAF1-208ENST00000549007 TMEM258P61165 79 aa1.94□□□□□ -2.1
APAF1-208ENST00000549007 FP248Q71RG6 208 aaPredicted RBP1.94□□□□□ -2.1
APAF1-208ENST00000549007 UBL5Q9BZL1 73 aa1.94□□□□□ -2.1
APAF1-208ENST00000549007 J3KT08 172 aa1.94□□□□□ -2.1
APAF1-208ENST00000549007 LINC00472Q9H8W2 130 aa1.94□□□□□ -2.1
APAF1-208ENST00000549007 MUC2Q02817 5179 aa1.94□□□□□ -2.1
APAF1-208ENST00000549007 PDE6GP18545 87 aa1.94□□□□□ -2.1
APAF1-208ENST00000549007 A0A087WVE0 104 aa1.93□□□□□ -2.1
APAF1-208ENST00000549007 TPRXLQ17RH7 258 aa1.93□□□□□ -2.1
APAF1-208ENST00000549007 NREPQ16612 68 aa1.93□□□□□ -2.1
APAF1-208ENST00000549007 ASB16-AS1Q495Z4 193 aa1.93□□□□□ -2.1
APAF1-208ENST00000549007 CYSTM1Q9H1C7 97 aa1.93□□□□□ -2.1
APAF1-208ENST00000549007 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
APAF1-208ENST00000549007 TRAV7A0A075B6U4 112 aa1.92□□□□□ -2.1
APAF1-208ENST00000549007 A0A1B0GU33 70 aa1.92□□□□□ -2.1
APAF1-208ENST00000549007 LCE3DQ9BYE3 92 aa1.92□□□□□ -2.1
APAF1-208ENST00000549007 MUC17Q685J3 4493 aa1.91□□□□□ -2.1
APAF1-208ENST00000549007 K7EQZ3 153 aa1.91□□□□□ -2.1
APAF1-208ENST00000549007 PCOTHQ58A44 107 aa1.91□□□□□ -2.1
APAF1-208ENST00000549007 KLKP1Q107X0 134 aa1.9□□□□□ -2.1
APAF1-208ENST00000549007 LCE1EQ5T753 118 aa1.9□□□□□ -2.1
APAF1-208ENST00000549007 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.1
APAF1-208ENST00000549007 WFDC13Q8IUB5 93 aa1.9□□□□□ -2.11
APAF1-208ENST00000549007 H7BZZ5 65 aa1.89□□□□□ -2.11
APAF1-208ENST00000549007 A0A1B0GW54 56 aa1.89□□□□□ -2.11
APAF1-208ENST00000549007 NDUFC1O43677 76 aa1.89□□□□□ -2.11
APAF1-208ENST00000549007 NDUFB1O75438 58 aa1.89□□□□□ -2.11
APAF1-208ENST00000549007 RPL37P61927 97 aaKnown RBP1.89□□□□□ -2.11
APAF1-208ENST00000549007 PRR15Q8IV56 129 aa1.89□□□□□ -2.11
APAF1-208ENST00000549007 C20orf197Q8N268 126 aa1.89□□□□□ -2.11
APAF1-208ENST00000549007 SERP1Q9Y6X1 66 aa1.89□□□□□ -2.11
APAF1-208ENST00000549007 MMP24-AS1A0A0U1RRL7 71 aa1.88□□□□□ -2.11
APAF1-208ENST00000549007 ATP5EP56381 51 aaPredicted RBP1.88□□□□□ -2.11
APAF1-208ENST00000549007 FAT4Q6V0I7 4981 aa1.88□□□□□ -2.11
APAF1-208ENST00000549007 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
APAF1-208ENST00000549007 C20orf166-AS1Q96NR2 134 aa1.87□□□□□ -2.11
APAF1-208ENST00000549007 hDV103S1A0JD37 113 aa1.86□□□□□ -2.11
APAF1-208ENST00000549007 ATP11AUNQ6ZP68 121 aa1.86□□□□□ -2.11
APAF1-208ENST00000549007 CASC2Q6XLA1 102 aa1.86□□□□□ -2.11
APAF1-208ENST00000549007 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
APAF1-208ENST00000549007 TMEM254Q8TBM7 123 aa1.86□□□□□ -2.11
APAF1-208ENST00000549007 MRPL34Q9BQ48 92 aaKnown RBP1.85□□□□□ -2.11
APAF1-208ENST00000549007 SNURFQ9Y675 71 aa1.85□□□□□ -2.11
APAF1-208ENST00000549007 HCG22E2RYF7 251 aa1.85□□□□□ -2.11
APAF1-208ENST00000549007 H3BPC8 53 aa1.85□□□□□ -2.11
APAF1-208ENST00000549007 ZCCHC13Q8WW36 166 aaKnown RBP1.84□□□□□ -2.11
APAF1-208ENST00000549007 SPINK7P58062 85 aa1.82□□□□□ -2.12
APAF1-208ENST00000549007 KRTAP19-2Q3LHN2 52 aa1.82□□□□□ -2.12
APAF1-208ENST00000549007 P0C880 135 aa1.81□□□□□ -2.12
APAF1-208ENST00000549007 COX6B2Q6YFQ2 88 aa1.81□□□□□ -2.12
APAF1-208ENST00000549007 CYP4F30PQ9H0H9 118 aa1.81□□□□□ -2.12
APAF1-208ENST00000549007 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
APAF1-208ENST00000549007 Q1T7F1 81 aa1.79□□□□□ -2.12
APAF1-208ENST00000549007 LINC00208Q96KT6 92 aa1.79□□□□□ -2.12
APAF1-208ENST00000549007 CHKB-CPT1BH3BT56 60 aa1.78□□□□□ -2.12
APAF1-208ENST00000549007 TRAV22A0A0B4J277 110 aa1.78□□□□□ -2.12
APAF1-208ENST00000549007 H0Y9P7 68 aa1.78□□□□□ -2.12
APAF1-208ENST00000549007 MT1HP80294 61 aa1.78□□□□□ -2.12
APAF1-208ENST00000549007 C7orf65Q6ZTY9 151 aa1.78□□□□□ -2.12
APAF1-208ENST00000549007 FLGP20930 4061 aaPredicted RBP1.78□□□□□ -2.12
APAF1-208ENST00000549007 TP53AIP1Q9HCN2 124 aa1.78□□□□□ -2.13
APAF1-208ENST00000549007 M0R2T5 61 aa1.77□□□□□ -2.13
APAF1-208ENST00000549007 BRK1Q8WUW1 75 aa1.76□□□□□ -2.13
APAF1-208ENST00000549007 LINC01554Q52M75 96 aa1.76□□□□□ -2.13
APAF1-208ENST00000549007 KTN1-AS1Q86SY8 53 aa1.75□□□□□ -2.13
APAF1-208ENST00000549007 LCA10Q71F78 164 aa1.75□□□□□ -2.13
APAF1-208ENST00000549007 LOC101927531A0A1B0GV80 90 aa1.74□□□□□ -2.13
APAF1-208ENST00000549007 Q5VV11 94 aa1.73□□□□□ -2.13
APAF1-208ENST00000549007 H1FX-AS1Q4G0G2 97 aa1.72□□□□□ -2.13
APAF1-208ENST00000549007 COA5Q86WW8 74 aa1.72□□□□□ -2.13
APAF1-208ENST00000549007 KRTAP10-10P60014 251 aa1.7□□□□□ -2.14
APAF1-208ENST00000549007 LINC01558Q9Y6Z2 57 aa1.7□□□□□ -2.14
APAF1-208ENST00000549007 SPTSSBQ8NFR3 76 aa1.7□□□□□ -2.14
APAF1-208ENST00000549007 PRR15LQ9BU68 103 aa1.7□□□□□ -2.14
APAF1-208ENST00000549007 S4R3F8 94 aa1.7□□□□□ -2.14
APAF1-208ENST00000549007 PRO2289Q9P1D8 64 aa1.7□□□□□ -2.14
APAF1-208ENST00000549007 MT2AP02795 61 aa1.69□□□□□ -2.14
APAF1-208ENST00000549007 MT1FP04733 61 aa1.69□□□□□ -2.14
APAF1-208ENST00000549007 CDC42SE1Q9NRR8 79 aa1.68□□□□□ -2.14
APAF1-208ENST00000549007 PP632Q6XCG6 107 aa1.68□□□□□ -2.14
APAF1-208ENST00000549007 FSIP2Q5CZC0 6907 aa1.68□□□□□ -2.14
APAF1-208ENST00000549007 ACYP2P14621 99 aa1.67□□□□□ -2.14
APAF1-208ENST00000549007 A6NN06 94 aa1.67□□□□□ -2.14
APAF1-208ENST00000549007 DMAC1Q96GE9 116 aa1.67□□□□□ -2.14
APAF1-208ENST00000549007 LCE3AQ5TA76 89 aa1.66□□□□□ -2.14
APAF1-208ENST00000549007 CSAG1Q6PB30 78 aa1.66□□□□□ -2.14
APAF1-208ENST00000549007 USH2AO75445 5202 aa1.66□□□□□ -2.14
APAF1-208ENST00000549007 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.15
APAF1-208ENST00000549007 A0A1B0GU69 56 aa1.64□□□□□ -2.15
APAF1-208ENST00000549007 SSPOA2VEC9 5147 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms