RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
CASC18-202ENST00000548557 TP53AIP1Q9HCN2 124 aa3.78□□□□□ -1.8
CASC18-202ENST00000548557 KRTAP13-2Q52LG2 175 aa3.77□□□□□ -1.81
CASC18-202ENST00000548557 TYMSOSQ8TAI1 123 aa3.77□□□□□ -1.81
CASC18-202ENST00000548557 KRTAP19-1Q8IUB9 90 aa3.76□□□□□ -1.81
CASC18-202ENST00000548557 DMAC1Q96GE9 116 aa3.76□□□□□ -1.81
CASC18-202ENST00000548557 IGLV7-46A0A075B6I9 117 aa3.76□□□□□ -1.81
CASC18-202ENST00000548557 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
CASC18-202ENST00000548557 MRPL34Q9BQ48 92 aaKnown RBP3.75□□□□□ -1.81
CASC18-202ENST00000548557 PKHD1L1Q86WI1 4243 aa3.73□□□□□ -1.81
CASC18-202ENST00000548557 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
CASC18-202ENST00000548557 SPINK1P00995 79 aa3.73□□□□□ -1.81
CASC18-202ENST00000548557 PCOTHQ58A44 107 aa3.73□□□□□ -1.81
CASC18-202ENST00000548557 LINC00304Q8N9R0 145 aa3.73□□□□□ -1.81
CASC18-202ENST00000548557 RPS29P62273 56 aaKnown RBP3.72□□□□□ -1.81
CASC18-202ENST00000548557 MT1HL1P0DM35 61 aa3.72□□□□□ -1.81
CASC18-202ENST00000548557 COA5Q86WW8 74 aa3.72□□□□□ -1.81
CASC18-202ENST00000548557 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
CASC18-202ENST00000548557 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
CASC18-202ENST00000548557 MYCBP2O75592 4640 aa3.71□□□□□ -1.82
CASC18-202ENST00000548557 LRP1Q07954 4544 aaKnown RBP3.7□□□□□ -1.82
CASC18-202ENST00000548557 KRTAP13-3Q3SY46 172 aa3.69□□□□□ -1.82
CASC18-202ENST00000548557 Q5W150 140 aa3.69□□□□□ -1.82
CASC18-202ENST00000548557 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
CASC18-202ENST00000548557 UQCR11O14957 56 aa3.69□□□□□ -1.82
CASC18-202ENST00000548557 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
CASC18-202ENST00000548557 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
CASC18-202ENST00000548557 SPINT4Q6UDR6 99 aa3.68□□□□□ -1.82
CASC18-202ENST00000548557 A0A1B0GU33 70 aa3.67□□□□□ -1.82
CASC18-202ENST00000548557 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
CASC18-202ENST00000548557 PCLOQ9Y6V0 5065 aa3.67□□□□□ -1.82
CASC18-202ENST00000548557 HRES1P13985 223 aa3.67□□□□□ -1.82
CASC18-202ENST00000548557 TNXBP22105 4242 aa3.65□□□□□ -1.82
CASC18-202ENST00000548557 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
CASC18-202ENST00000548557 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.83
CASC18-202ENST00000548557 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
CASC18-202ENST00000548557 IGKV2-30P06310 120 aa3.6□□□□□ -1.83
CASC18-202ENST00000548557 ACYP2P14621 99 aa3.6□□□□□ -1.83
CASC18-202ENST00000548557 KRTAP3-1Q9BYR8 98 aa3.59□□□□□ -1.83
CASC18-202ENST00000548557 A0A1B0GU69 56 aa3.55□□□□□ -1.84
CASC18-202ENST00000548557 TPRXLQ17RH7 258 aa3.54□□□□□ -1.84
CASC18-202ENST00000548557 IGKV2D-30A0A075B6S6 120 aa3.53□□□□□ -1.84
CASC18-202ENST00000548557 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
CASC18-202ENST00000548557 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
CASC18-202ENST00000548557 KRTAP9-7A8MTY7 169 aa3.52□□□□□ -1.85
CASC18-202ENST00000548557 HERC1Q15751 4861 aa3.52□□□□□ -1.85
CASC18-202ENST00000548557 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
CASC18-202ENST00000548557 R4GN34 69 aa3.51□□□□□ -1.85
CASC18-202ENST00000548557 C9orf92A6NGG3 77 aa3.5□□□□□ -1.85
CASC18-202ENST00000548557 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
CASC18-202ENST00000548557 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
CASC18-202ENST00000548557 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
CASC18-202ENST00000548557 KRTAP4-8A0A0G2JLE6 195 aa3.45□□□□□ -1.86
CASC18-202ENST00000548557 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
CASC18-202ENST00000548557 LPAP08519 4548 aa3.43□□□□□ -1.86
CASC18-202ENST00000548557 LRP2P98164 4655 aa3.42□□□□□ -1.86
CASC18-202ENST00000548557 KRTAP9-3Q9BYQ3 159 aa3.41□□□□□ -1.86
CASC18-202ENST00000548557 CRIPTQ9P021 101 aa3.35□□□□□ -1.87
CASC18-202ENST00000548557 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
CASC18-202ENST00000548557 COX6B2Q6YFQ2 88 aa3.34□□□□□ -1.87
CASC18-202ENST00000548557 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
CASC18-202ENST00000548557 H0YAA0 97 aa3.33□□□□□ -1.88
CASC18-202ENST00000548557 KRTAP4-7Q9BYR0 210 aa3.32□□□□□ -1.88
CASC18-202ENST00000548557 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
CASC18-202ENST00000548557 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
CASC18-202ENST00000548557 KRTAP4-9Q9BYQ8 210 aa3.31□□□□□ -1.88
CASC18-202ENST00000548557 MUC17Q685J3 4493 aa3.31□□□□□ -1.88
CASC18-202ENST00000548557 MUC2Q02817 5179 aa3.28□□□□□ -1.88
CASC18-202ENST00000548557 RNF213Q63HN8 5207 aa3.26□□□□□ -1.89
CASC18-202ENST00000548557 KRTAP10-6P60371 365 aaPredicted RBP3.23□□□□□ -1.89
CASC18-202ENST00000548557 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
CASC18-202ENST00000548557 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
CASC18-202ENST00000548557 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
CASC18-202ENST00000548557 INE1O15225 51 aa3.21□□□□□ -1.9
CASC18-202ENST00000548557 S4R3F8 94 aa3.21□□□□□ -1.9
CASC18-202ENST00000548557 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
CASC18-202ENST00000548557 FAT4Q6V0I7 4981 aa3.15□□□□□ -1.9
CASC18-202ENST00000548557 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
CASC18-202ENST00000548557 A0A0D9SG42 100 aa3.14□□□□□ -1.91
CASC18-202ENST00000548557 MT1HP80294 61 aa3.14□□□□□ -1.91
CASC18-202ENST00000548557 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
CASC18-202ENST00000548557 M0R2T5 61 aa3.11□□□□□ -1.91
CASC18-202ENST00000548557 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
CASC18-202ENST00000548557 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
CASC18-202ENST00000548557 KRTAP12-1P59990 96 aa3.07□□□□□ -1.92
CASC18-202ENST00000548557 M0QZ58 72 aa3.06□□□□□ -1.92
CASC18-202ENST00000548557 KRTAP9-8Q9BYQ0 159 aa3.01□□□□□ -1.93
CASC18-202ENST00000548557 PP632Q6XCG6 107 aa3□□□□□ -1.93
CASC18-202ENST00000548557 MT2AP02795 61 aa2.98□□□□□ -1.93
CASC18-202ENST00000548557 KRTAP10-10P60014 251 aa2.96□□□□□ -1.93
CASC18-202ENST00000548557 MT1FP04733 61 aa2.95□□□□□ -1.94
CASC18-202ENST00000548557 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
CASC18-202ENST00000548557 KRTAP19-8Q3LI54 63 aa2.83□□□□□ -1.96
CASC18-202ENST00000548557 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
CASC18-202ENST00000548557 MT1BP07438 61 aa2.78□□□□□ -1.96
CASC18-202ENST00000548557 USH2AO75445 5202 aa2.75□□□□□ -1.97
CASC18-202ENST00000548557 FSIP2Q5CZC0 6907 aa2.75□□□□□ -1.97
CASC18-202ENST00000548557 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
CASC18-202ENST00000548557 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
CASC18-202ENST00000548557 TNP1P09430 55 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms