RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 NDUFC1O43677 76 aa5.83□□□□□ -1.48
TUBA1C-203ENST00000548470 TMEM258P61165 79 aa5.83□□□□□ -1.48
TUBA1C-203ENST00000548470 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
TUBA1C-203ENST00000548470 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
TUBA1C-203ENST00000548470 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
TUBA1C-203ENST00000548470 ATP5EP56381 51 aaPredicted RBP5.73□□□□□ -1.49
TUBA1C-203ENST00000548470 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
TUBA1C-203ENST00000548470 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
TUBA1C-203ENST00000548470 SPANXA2-OT1Q8N9U9 137 aa5.71□□□□□ -1.5
TUBA1C-203ENST00000548470 KRTAP9-6A0A140TA67 174 aa5.7□□□□□ -1.5
TUBA1C-203ENST00000548470 A8MUN3 132 aa5.67□□□□□ -1.5
TUBA1C-203ENST00000548470 SERP1Q9Y6X1 66 aa5.67□□□□□ -1.5
TUBA1C-203ENST00000548470 S4R3F8 94 aa5.67□□□□□ -1.5
TUBA1C-203ENST00000548470 LCA10Q71F78 164 aa5.66□□□□□ -1.5
TUBA1C-203ENST00000548470 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.5
TUBA1C-203ENST00000548470 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.5
TUBA1C-203ENST00000548470 MT2AP02795 61 aa5.63□□□□□ -1.51
TUBA1C-203ENST00000548470 ACYP2P14621 99 aa5.63□□□□□ -1.51
TUBA1C-203ENST00000548470 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
TUBA1C-203ENST00000548470 COA5Q86WW8 74 aa5.61□□□□□ -1.51
TUBA1C-203ENST00000548470 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
TUBA1C-203ENST00000548470 MT1FP04733 61 aa5.57□□□□□ -1.52
TUBA1C-203ENST00000548470 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
TUBA1C-203ENST00000548470 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
TUBA1C-203ENST00000548470 CSAG1Q6PB30 78 aa5.52□□□□□ -1.53
TUBA1C-203ENST00000548470 SMIM26A0A096LP01 95 aa5.51□□□□□ -1.53
TUBA1C-203ENST00000548470 SPTSSBQ8NFR3 76 aa5.44□□□□□ -1.54
TUBA1C-203ENST00000548470 ADM2Q7Z4H4 148 aa5.41□□□□□ -1.54
TUBA1C-203ENST00000548470 Q1T7F1 81 aa5.39□□□□□ -1.55
TUBA1C-203ENST00000548470 USH2AO75445 5202 aa5.39□□□□□ -1.55
TUBA1C-203ENST00000548470 P0C880 135 aa5.37□□□□□ -1.55
TUBA1C-203ENST00000548470 H0YAA0 97 aa5.35□□□□□ -1.55
TUBA1C-203ENST00000548470 V9GYY9 64 aa5.35□□□□□ -1.55
TUBA1C-203ENST00000548470 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
TUBA1C-203ENST00000548470 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
TUBA1C-203ENST00000548470 PSPHP1O15172 72 aa5.31□□□□□ -1.56
TUBA1C-203ENST00000548470 CRIPTQ9P021 101 aa5.31□□□□□ -1.56
TUBA1C-203ENST00000548470 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
TUBA1C-203ENST00000548470 PRR15LQ9BU68 103 aa5.29□□□□□ -1.56
TUBA1C-203ENST00000548470 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
TUBA1C-203ENST00000548470 SSPOA2VEC9 5147 aa5.28□□□□□ -1.56
TUBA1C-203ENST00000548470 A0A1B0GU69 56 aa5.27□□□□□ -1.57
TUBA1C-203ENST00000548470 Q5VV11 94 aa5.27□□□□□ -1.57
TUBA1C-203ENST00000548470 SEC61GP60059 68 aa5.25□□□□□ -1.57
TUBA1C-203ENST00000548470 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
TUBA1C-203ENST00000548470 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
TUBA1C-203ENST00000548470 M0QZ58 72 aa5.21□□□□□ -1.58
TUBA1C-203ENST00000548470 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.58
TUBA1C-203ENST00000548470 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
TUBA1C-203ENST00000548470 R4GN34 69 aa5.18□□□□□ -1.58
TUBA1C-203ENST00000548470 A0A1B0GU33 70 aa5.17□□□□□ -1.58
TUBA1C-203ENST00000548470 MT1BP07438 61 aa5.16□□□□□ -1.58
TUBA1C-203ENST00000548470 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
TUBA1C-203ENST00000548470 A6NED7 52 aa5.14□□□□□ -1.59
TUBA1C-203ENST00000548470 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
TUBA1C-203ENST00000548470 LINC01554Q52M75 96 aa5.14□□□□□ -1.59
TUBA1C-203ENST00000548470 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
TUBA1C-203ENST00000548470 BRK1Q8WUW1 75 aa5.13□□□□□ -1.59
TUBA1C-203ENST00000548470 A6NN06 94 aa5.1□□□□□ -1.59
TUBA1C-203ENST00000548470 A0A0D9SG42 100 aa5.09□□□□□ -1.59
TUBA1C-203ENST00000548470 A8MU10 97 aa5.08□□□□□ -1.6
TUBA1C-203ENST00000548470 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
TUBA1C-203ENST00000548470 UQCR11O14957 56 aa5.05□□□□□ -1.6
TUBA1C-203ENST00000548470 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
TUBA1C-203ENST00000548470 PRO0628Q9UI54 55 aa5.05□□□□□ -1.6
TUBA1C-203ENST00000548470 PLAC4Q8WY50 150 aa5.02□□□□□ -1.61
TUBA1C-203ENST00000548470 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
TUBA1C-203ENST00000548470 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
TUBA1C-203ENST00000548470 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
TUBA1C-203ENST00000548470 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
TUBA1C-203ENST00000548470 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
TUBA1C-203ENST00000548470 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
TUBA1C-203ENST00000548470 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
TUBA1C-203ENST00000548470 KRTAP12-2P59991 146 aa4.96□□□□□ -1.62
TUBA1C-203ENST00000548470 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
TUBA1C-203ENST00000548470 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
TUBA1C-203ENST00000548470 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
TUBA1C-203ENST00000548470 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
TUBA1C-203ENST00000548470 MT1XP80297 61 aa4.87□□□□□ -1.63
TUBA1C-203ENST00000548470 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
TUBA1C-203ENST00000548470 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
TUBA1C-203ENST00000548470 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
TUBA1C-203ENST00000548470 K7ERS5 55 aa4.75□□□□□ -1.65
TUBA1C-203ENST00000548470 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
TUBA1C-203ENST00000548470 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
TUBA1C-203ENST00000548470 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
TUBA1C-203ENST00000548470 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
TUBA1C-203ENST00000548470 KRTAP8-1Q8IUC2 63 aa4.68□□□□□ -1.66
TUBA1C-203ENST00000548470 KTN1-AS1Q86SY8 53 aa4.67□□□□□ -1.66
TUBA1C-203ENST00000548470 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
TUBA1C-203ENST00000548470 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
TUBA1C-203ENST00000548470 MUC12Q9UKN1 5478 aa4.61□□□□□ -1.67
TUBA1C-203ENST00000548470 KMT2DO14686 5537 aa4.61□□□□□ -1.67
TUBA1C-203ENST00000548470 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
TUBA1C-203ENST00000548470 ROMO1P60602 79 aa4.59□□□□□ -1.67
TUBA1C-203ENST00000548470 NEBP20929 6669 aa4.58□□□□□ -1.68
TUBA1C-203ENST00000548470 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
TUBA1C-203ENST00000548470 TNP1P09430 55 aa4.55□□□□□ -1.68
TUBA1C-203ENST00000548470 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
TUBA1C-203ENST00000548470 MDN1Q9NU22 5596 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms