RNA–Protein interactions for RNA: ENST00000548221.5

NCKAP1L-204, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 3,559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-204ENST00000548221 DNAH11Q96DT5 4516 aa3.12□□□□□ -1.91
NCKAP1L-204ENST00000548221 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
NCKAP1L-204ENST00000548221 DNAH17Q9UFH2 4485 aa3.11□□□□□ -1.91
NCKAP1L-204ENST00000548221 RYR1P21817 5038 aa3.11□□□□□ -1.91
NCKAP1L-204ENST00000548221 Q5VSD8 79 aa3.1□□□□□ -1.91
NCKAP1L-204ENST00000548221 KRTAP3-1Q9BYR8 98 aa3.1□□□□□ -1.91
NCKAP1L-204ENST00000548221 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
NCKAP1L-204ENST00000548221 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
NCKAP1L-204ENST00000548221 DNAH2Q9P225 4427 aa3.09□□□□□ -1.91
NCKAP1L-204ENST00000548221 DNAH6Q9C0G6 4158 aa3.07□□□□□ -1.92
NCKAP1L-204ENST00000548221 FAT1Q14517 4588 aa3.06□□□□□ -1.92
NCKAP1L-204ENST00000548221 KRTAP13-4Q3LI77 160 aa3.06□□□□□ -1.92
NCKAP1L-204ENST00000548221 DNAH5Q8TE73 4624 aa3.04□□□□□ -1.92
NCKAP1L-204ENST00000548221 S4R3F8 94 aa3.04□□□□□ -1.92
NCKAP1L-204ENST00000548221 HECTD4Q9Y4D8 3996 aa3.02□□□□□ -1.93
NCKAP1L-204ENST00000548221 LRP1BQ9NZR2 4599 aa3.02□□□□□ -1.93
NCKAP1L-204ENST00000548221 MYCBP2O75592 4640 aa3.02□□□□□ -1.93
NCKAP1L-204ENST00000548221 SEC61BP60468 96 aaKnown RBP3.02□□□□□ -1.93
NCKAP1L-204ENST00000548221 DYNC1H1Q14204 4646 aaKnown RBP3.01□□□□□ -1.93
NCKAP1L-204ENST00000548221 KRTAP10-6P60371 365 aaPredicted RBP3.01□□□□□ -1.93
NCKAP1L-204ENST00000548221 DYNC2H1Q8NCM8 4307 aaKnown RBP3.01□□□□□ -1.93
NCKAP1L-204ENST00000548221 KRTAP12-2P59991 146 aa3□□□□□ -1.93
NCKAP1L-204ENST00000548221 PCLOQ9Y6V0 5065 aa3□□□□□ -1.93
NCKAP1L-204ENST00000548221 APOBP04114 4563 aaKnown RBP2.99□□□□□ -1.93
NCKAP1L-204ENST00000548221 BIRC6Q9NR09 4857 aa2.99□□□□□ -1.93
NCKAP1L-204ENST00000548221 ABCA13Q86UQ4 5058 aa2.98□□□□□ -1.93
NCKAP1L-204ENST00000548221 FAT2Q9NYQ8 4349 aa2.98□□□□□ -1.93
NCKAP1L-204ENST00000548221 HERC2O95714 4834 aa2.98□□□□□ -1.93
NCKAP1L-204ENST00000548221 HERC1Q15751 4861 aa2.97□□□□□ -1.93
NCKAP1L-204ENST00000548221 A0A1B0GVY2 172 aa2.97□□□□□ -1.93
NCKAP1L-204ENST00000548221 RPS29P62273 56 aaKnown RBP2.97□□□□□ -1.93
NCKAP1L-204ENST00000548221 KRTAP4-5Q9BYR2 181 aa2.96□□□□□ -1.94
NCKAP1L-204ENST00000548221 VPS13BQ7Z7G8 4022 aa2.96□□□□□ -1.94
NCKAP1L-204ENST00000548221 LRP1Q07954 4544 aaKnown RBP2.95□□□□□ -1.94
NCKAP1L-204ENST00000548221 FAT3Q8TDW7 4589 aa2.95□□□□□ -1.94
NCKAP1L-204ENST00000548221 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
NCKAP1L-204ENST00000548221 PKD1P98161 4303 aa2.94□□□□□ -1.94
NCKAP1L-204ENST00000548221 KRTAP23-1A1A580 65 aa2.94□□□□□ -1.94
NCKAP1L-204ENST00000548221 KRTAP12-1P59990 96 aa2.94□□□□□ -1.94
NCKAP1L-204ENST00000548221 XP32Q5T750 250 aa2.92□□□□□ -1.94
NCKAP1L-204ENST00000548221 KRTAP17-1Q9BYP8 105 aa2.92□□□□□ -1.94
NCKAP1L-204ENST00000548221 HSPG2P98160 4391 aa2.91□□□□□ -1.94
NCKAP1L-204ENST00000548221 KRTAP10-8P60410 259 aa2.9□□□□□ -1.95
NCKAP1L-204ENST00000548221 RNF213Q63HN8 5207 aa2.88□□□□□ -1.95
NCKAP1L-204ENST00000548221 M0QZ58 72 aa2.87□□□□□ -1.95
NCKAP1L-204ENST00000548221 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
NCKAP1L-204ENST00000548221 UBR4Q5T4S7 5183 aa2.87□□□□□ -1.95
NCKAP1L-204ENST00000548221 R4GN34 69 aa2.86□□□□□ -1.95
NCKAP1L-204ENST00000548221 LRP2P98164 4655 aa2.83□□□□□ -1.96
NCKAP1L-204ENST00000548221 MUC2Q02817 5179 aa2.82□□□□□ -1.96
NCKAP1L-204ENST00000548221 M0R2T5 61 aa2.81□□□□□ -1.96
NCKAP1L-204ENST00000548221 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
NCKAP1L-204ENST00000548221 MT1HL1P0DM35 61 aa2.8□□□□□ -1.96
NCKAP1L-204ENST00000548221 LPAP08519 4548 aa2.76□□□□□ -1.97
NCKAP1L-204ENST00000548221 PP632Q6XCG6 107 aa2.73□□□□□ -1.97
NCKAP1L-204ENST00000548221 FSIP2Q5CZC0 6907 aa2.71□□□□□ -1.98
NCKAP1L-204ENST00000548221 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
NCKAP1L-204ENST00000548221 FAT4Q6V0I7 4981 aa2.67□□□□□ -1.98
NCKAP1L-204ENST00000548221 HMCN2Q8NDA2 5059 aa2.66□□□□□ -1.98
NCKAP1L-204ENST00000548221 TNP1P09430 55 aa2.63□□□□□ -1.99
NCKAP1L-204ENST00000548221 TNXBP22105 4242 aa2.62□□□□□ -1.99
NCKAP1L-204ENST00000548221 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
NCKAP1L-204ENST00000548221 PRO2289Q9P1D8 64 aa2.61□□□□□ -1.99
NCKAP1L-204ENST00000548221 KRTAP10-10P60014 251 aa2.58□□□□□ -2
NCKAP1L-204ENST00000548221 KRTAP19-4Q3LI73 84 aa2.56□□□□□ -2
NCKAP1L-204ENST00000548221 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
NCKAP1L-204ENST00000548221 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
NCKAP1L-204ENST00000548221 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2.01
NCKAP1L-204ENST00000548221 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2.01
NCKAP1L-204ENST00000548221 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
NCKAP1L-204ENST00000548221 INE1O15225 51 aa2.51□□□□□ -2.01
NCKAP1L-204ENST00000548221 KRTAP19-1Q8IUB9 90 aa2.51□□□□□ -2.01
NCKAP1L-204ENST00000548221 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
NCKAP1L-204ENST00000548221 USH2AO75445 5202 aa2.44□□□□□ -2.02
NCKAP1L-204ENST00000548221 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
NCKAP1L-204ENST00000548221 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
NCKAP1L-204ENST00000548221 LCE5AQ5TCM9 118 aa2.41□□□□□ -2.02
NCKAP1L-204ENST00000548221 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.03
NCKAP1L-204ENST00000548221 LOC100996750A0A140TA64 210 aa2.39□□□□□ -2.03
NCKAP1L-204ENST00000548221 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
NCKAP1L-204ENST00000548221 MUC17Q685J3 4493 aa2.37□□□□□ -2.03
NCKAP1L-204ENST00000548221 MT1HP80294 61 aa2.36□□□□□ -2.03
NCKAP1L-204ENST00000548221 KRTAP4-8Q9BYQ9 185 aa2.34□□□□□ -2.03
NCKAP1L-204ENST00000548221 MT1FP04733 61 aa2.34□□□□□ -2.04
NCKAP1L-204ENST00000548221 MT2AP02795 61 aa2.33□□□□□ -2.04
NCKAP1L-204ENST00000548221 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
NCKAP1L-204ENST00000548221 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
NCKAP1L-204ENST00000548221 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.3□□□□□ -2.04
NCKAP1L-204ENST00000548221 KRTAP9-2Q9BYQ4 174 aa2.3□□□□□ -2.04
NCKAP1L-204ENST00000548221 FLGP20930 4061 aaPredicted RBP2.29□□□□□ -2.04
NCKAP1L-204ENST00000548221 KRTAP8-1Q8IUC2 63 aa2.28□□□□□ -2.04
NCKAP1L-204ENST00000548221 SPRR2GQ9BYE4 73 aa2.28□□□□□ -2.04
NCKAP1L-204ENST00000548221 KRTAP10-12P60413 245 aa2.27□□□□□ -2.05
NCKAP1L-204ENST00000548221 KRTAP9-8Q9BYQ0 159 aa2.24□□□□□ -2.05
NCKAP1L-204ENST00000548221 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
NCKAP1L-204ENST00000548221 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
NCKAP1L-204ENST00000548221 LCE3BQ5TA77 95 aa2.19□□□□□ -2.06
NCKAP1L-204ENST00000548221 MT1BP07438 61 aa2.19□□□□□ -2.06
NCKAP1L-204ENST00000548221 KRTAP10-7P60409 375 aaPredicted RBP2.19□□□□□ -2.06
NCKAP1L-204ENST00000548221 KMT2DO14686 5537 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms