RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 KRTAP17-1Q9BYP8 105 aa8.39□□□□□ -1.07
CNOT2-209ENST00000548159 A0A1B0GU33 70 aa8.38□□□□□ -1.07
CNOT2-209ENST00000548159 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
CNOT2-209ENST00000548159 RYR1P21817 5038 aa8.32□□□□□ -1.08
CNOT2-209ENST00000548159 XP32Q5T750 250 aa8.3□□□□□ -1.08
CNOT2-209ENST00000548159 KIAA1109Q2LD37 5005 aa8.3□□□□□ -1.08
CNOT2-209ENST00000548159 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
CNOT2-209ENST00000548159 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
CNOT2-209ENST00000548159 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
CNOT2-209ENST00000548159 LINC01554Q52M75 96 aa8.24□□□□□ -1.09
CNOT2-209ENST00000548159 LPAP08519 4548 aa8.23□□□□□ -1.09
CNOT2-209ENST00000548159 MT1HL1P0DM35 61 aa8.19□□□□□ -1.1
CNOT2-209ENST00000548159 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
CNOT2-209ENST00000548159 LRP2P98164 4655 aa8.16□□□□□ -1.1
CNOT2-209ENST00000548159 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
CNOT2-209ENST00000548159 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
CNOT2-209ENST00000548159 S4R3F8 94 aa8.12□□□□□ -1.11
CNOT2-209ENST00000548159 EPPK1P58107 5090 aaKnown RBP8.09□□□□□ -1.11
CNOT2-209ENST00000548159 A0A0D9SG42 100 aa8.06□□□□□ -1.12
CNOT2-209ENST00000548159 P0C880 135 aa8.06□□□□□ -1.12
CNOT2-209ENST00000548159 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
CNOT2-209ENST00000548159 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
CNOT2-209ENST00000548159 K7ERS5 55 aa8.02□□□□□ -1.13
CNOT2-209ENST00000548159 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
CNOT2-209ENST00000548159 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
CNOT2-209ENST00000548159 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
CNOT2-209ENST00000548159 ROMO1P60602 79 aa7.89□□□□□ -1.15
CNOT2-209ENST00000548159 H3BS24 57 aa7.86□□□□□ -1.15
CNOT2-209ENST00000548159 KRTAP12-2P59991 146 aa7.85□□□□□ -1.15
CNOT2-209ENST00000548159 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
CNOT2-209ENST00000548159 SPINT4Q6UDR6 99 aa7.77□□□□□ -1.17
CNOT2-209ENST00000548159 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
CNOT2-209ENST00000548159 MUC17Q685J3 4493 aa7.72□□□□□ -1.17
CNOT2-209ENST00000548159 BIRC6Q9NR09 4857 aa7.72□□□□□ -1.17
CNOT2-209ENST00000548159 M0QZ58 72 aa7.68□□□□□ -1.18
CNOT2-209ENST00000548159 KRTAP4-1Q9BYQ7 146 aa7.68□□□□□ -1.18
CNOT2-209ENST00000548159 HERC2O95714 4834 aa7.63□□□□□ -1.19
CNOT2-209ENST00000548159 SEC61BP60468 96 aaKnown RBP7.61□□□□□ -1.19
CNOT2-209ENST00000548159 MUC2Q02817 5179 aa7.6□□□□□ -1.19
CNOT2-209ENST00000548159 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
CNOT2-209ENST00000548159 J3QL48 77 aa7.56□□□□□ -1.2
CNOT2-209ENST00000548159 R4GN34 69 aa7.56□□□□□ -1.2
CNOT2-209ENST00000548159 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
CNOT2-209ENST00000548159 HERC1Q15751 4861 aa7.35□□□□□ -1.23
CNOT2-209ENST00000548159 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
CNOT2-209ENST00000548159 KRTAP15-1Q3LI76 137 aa7.3□□□□□ -1.24
CNOT2-209ENST00000548159 PCLOQ9Y6V0 5065 aa7.26□□□□□ -1.25
CNOT2-209ENST00000548159 NDUFAF8A1L188 74 aa7.22□□□□□ -1.25
CNOT2-209ENST00000548159 FAT4Q6V0I7 4981 aa7.2□□□□□ -1.26
CNOT2-209ENST00000548159 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
CNOT2-209ENST00000548159 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
CNOT2-209ENST00000548159 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
CNOT2-209ENST00000548159 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
CNOT2-209ENST00000548159 PLAC4Q8WY50 150 aa7.01□□□□□ -1.29
CNOT2-209ENST00000548159 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
CNOT2-209ENST00000548159 PP632Q6XCG6 107 aa6.92□□□□□ -1.3
CNOT2-209ENST00000548159 M0R2T5 61 aa6.88□□□□□ -1.31
CNOT2-209ENST00000548159 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
CNOT2-209ENST00000548159 TNP1P09430 55 aa6.87□□□□□ -1.31
CNOT2-209ENST00000548159 SPRR2GQ9BYE4 73 aa6.85□□□□□ -1.31
CNOT2-209ENST00000548159 MT1HP80294 61 aa6.85□□□□□ -1.31
CNOT2-209ENST00000548159 MT1FP04733 61 aa6.76□□□□□ -1.33
CNOT2-209ENST00000548159 MT2AP02795 61 aa6.74□□□□□ -1.33
CNOT2-209ENST00000548159 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
CNOT2-209ENST00000548159 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.34
CNOT2-209ENST00000548159 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
CNOT2-209ENST00000548159 LUZP6Q538Z0 58 aa6.61□□□□□ -1.35
CNOT2-209ENST00000548159 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
CNOT2-209ENST00000548159 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
CNOT2-209ENST00000548159 MT1BP07438 61 aa6.52□□□□□ -1.37
CNOT2-209ENST00000548159 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
CNOT2-209ENST00000548159 KRTAP10-5P60370 271 aa6.48□□□□□ -1.37
CNOT2-209ENST00000548159 MT1XP80297 61 aa6.46□□□□□ -1.37
CNOT2-209ENST00000548159 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
CNOT2-209ENST00000548159 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
CNOT2-209ENST00000548159 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
CNOT2-209ENST00000548159 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
CNOT2-209ENST00000548159 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
CNOT2-209ENST00000548159 USH2AO75445 5202 aa6.27□□□□□ -1.41
CNOT2-209ENST00000548159 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
CNOT2-209ENST00000548159 LCE2BO14633 110 aa6.2□□□□□ -1.42
CNOT2-209ENST00000548159 KMT2DO14686 5537 aa6.14□□□□□ -1.43
CNOT2-209ENST00000548159 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
CNOT2-209ENST00000548159 LCE2AQ5TA79 106 aaPredicted RBP6.05□□□□□ -1.44
CNOT2-209ENST00000548159 KRTAP19-5Q3LI72 72 aa6.02□□□□□ -1.45
CNOT2-209ENST00000548159 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
CNOT2-209ENST00000548159 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
CNOT2-209ENST00000548159 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
CNOT2-209ENST00000548159 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
CNOT2-209ENST00000548159 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
CNOT2-209ENST00000548159 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
CNOT2-209ENST00000548159 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
CNOT2-209ENST00000548159 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
CNOT2-209ENST00000548159 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
CNOT2-209ENST00000548159 SSPOA2VEC9 5147 aa5.71□□□□□ -1.5
CNOT2-209ENST00000548159 INE1O15225 51 aa5.7□□□□□ -1.5
CNOT2-209ENST00000548159 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
CNOT2-209ENST00000548159 MT1EP04732 61 aa5.58□□□□□ -1.52
CNOT2-209ENST00000548159 MT1LQ93083 61 aa5.57□□□□□ -1.52
CNOT2-209ENST00000548159 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 1014.9 ms