RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 SMR3BP02814 79 aaPredicted RBP7.29□□□□□ -1.24
SLC38A1-204ENST00000546893 KRTAP3-1Q9BYR8 98 aa7.28□□□□□ -1.24
SLC38A1-204ENST00000546893 PKHD1L1Q86WI1 4243 aa7.26□□□□□ -1.25
SLC38A1-204ENST00000546893 RYR3Q15413 4870 aa7.25□□□□□ -1.25
SLC38A1-204ENST00000546893 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
SLC38A1-204ENST00000546893 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
SLC38A1-204ENST00000546893 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
SLC38A1-204ENST00000546893 RPL37P61927 97 aaKnown RBP7.13□□□□□ -1.27
SLC38A1-204ENST00000546893 LUZP6Q538Z0 58 aa7.12□□□□□ -1.27
SLC38A1-204ENST00000546893 FAT1Q14517 4588 aa7.1□□□□□ -1.27
SLC38A1-204ENST00000546893 S4R3F8 94 aa7.02□□□□□ -1.29
SLC38A1-204ENST00000546893 HSPG2P98160 4391 aa7.02□□□□□ -1.29
SLC38A1-204ENST00000546893 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
SLC38A1-204ENST00000546893 XP32Q5T750 250 aa7.01□□□□□ -1.29
SLC38A1-204ENST00000546893 Q5VSD8 79 aa7.01□□□□□ -1.29
SLC38A1-204ENST00000546893 DMBT1Q9UGM3 2413 aaPredicted RBP6.99□□□□□ -1.29
SLC38A1-204ENST00000546893 EPPK1P58107 5090 aaKnown RBP6.99□□□□□ -1.29
SLC38A1-204ENST00000546893 A0A0D9SG42 100 aa6.99□□□□□ -1.29
SLC38A1-204ENST00000546893 RYR1P21817 5038 aa6.99□□□□□ -1.29
SLC38A1-204ENST00000546893 KRTAP17-1Q9BYP8 105 aa6.99□□□□□ -1.29
SLC38A1-204ENST00000546893 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
SLC38A1-204ENST00000546893 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
SLC38A1-204ENST00000546893 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.3
SLC38A1-204ENST00000546893 TNXBP22105 4242 aa6.94□□□□□ -1.3
SLC38A1-204ENST00000546893 KIAA1109Q2LD37 5005 aa6.93□□□□□ -1.3
SLC38A1-204ENST00000546893 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
SLC38A1-204ENST00000546893 LRP1Q07954 4544 aaKnown RBP6.83□□□□□ -1.32
SLC38A1-204ENST00000546893 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
SLC38A1-204ENST00000546893 M0QZ58 72 aa6.8□□□□□ -1.32
SLC38A1-204ENST00000546893 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
SLC38A1-204ENST00000546893 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
SLC38A1-204ENST00000546893 BIRC6Q9NR09 4857 aa6.72□□□□□ -1.33
SLC38A1-204ENST00000546893 MYCBP2O75592 4640 aa6.71□□□□□ -1.34
SLC38A1-204ENST00000546893 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
SLC38A1-204ENST00000546893 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
SLC38A1-204ENST00000546893 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
SLC38A1-204ENST00000546893 HERC2O95714 4834 aa6.64□□□□□ -1.35
SLC38A1-204ENST00000546893 ABCA13Q86UQ4 5058 aa6.6□□□□□ -1.35
SLC38A1-204ENST00000546893 J3QL48 77 aa6.54□□□□□ -1.36
SLC38A1-204ENST00000546893 R4GN34 69 aa6.5□□□□□ -1.37
SLC38A1-204ENST00000546893 LRP2P98164 4655 aa6.37□□□□□ -1.39
SLC38A1-204ENST00000546893 LPAP08519 4548 aa6.36□□□□□ -1.39
SLC38A1-204ENST00000546893 PCLOQ9Y6V0 5065 aa6.33□□□□□ -1.4
SLC38A1-204ENST00000546893 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
SLC38A1-204ENST00000546893 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
SLC38A1-204ENST00000546893 MUC17Q685J3 4493 aa6.25□□□□□ -1.41
SLC38A1-204ENST00000546893 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
SLC38A1-204ENST00000546893 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
SLC38A1-204ENST00000546893 HERC1Q15751 4861 aa6.22□□□□□ -1.41
SLC38A1-204ENST00000546893 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
SLC38A1-204ENST00000546893 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
SLC38A1-204ENST00000546893 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.43
SLC38A1-204ENST00000546893 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
SLC38A1-204ENST00000546893 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
SLC38A1-204ENST00000546893 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
SLC38A1-204ENST00000546893 TNP1P09430 55 aa6.02□□□□□ -1.45
SLC38A1-204ENST00000546893 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
SLC38A1-204ENST00000546893 MUC2Q02817 5179 aa5.94□□□□□ -1.46
SLC38A1-204ENST00000546893 INE1O15225 51 aa5.92□□□□□ -1.46
SLC38A1-204ENST00000546893 SPRR2GQ9BYE4 73 aa5.9□□□□□ -1.47
SLC38A1-204ENST00000546893 UBR4Q5T4S7 5183 aa5.86□□□□□ -1.47
SLC38A1-204ENST00000546893 RNF213Q63HN8 5207 aa5.82□□□□□ -1.48
SLC38A1-204ENST00000546893 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
SLC38A1-204ENST00000546893 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
SLC38A1-204ENST00000546893 M0R2T5 61 aa5.7□□□□□ -1.5
SLC38A1-204ENST00000546893 FAT4Q6V0I7 4981 aa5.68□□□□□ -1.5
SLC38A1-204ENST00000546893 MT1HP80294 61 aa5.68□□□□□ -1.5
SLC38A1-204ENST00000546893 KRTAP19-8Q3LI54 63 aa5.63□□□□□ -1.51
SLC38A1-204ENST00000546893 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
SLC38A1-204ENST00000546893 MT2AP02795 61 aa5.6□□□□□ -1.51
SLC38A1-204ENST00000546893 MT1FP04733 61 aa5.57□□□□□ -1.52
SLC38A1-204ENST00000546893 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
SLC38A1-204ENST00000546893 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
SLC38A1-204ENST00000546893 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
SLC38A1-204ENST00000546893 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
SLC38A1-204ENST00000546893 MT1BP07438 61 aa5.43□□□□□ -1.54
SLC38A1-204ENST00000546893 KRTAP10-5P60370 271 aa5.42□□□□□ -1.54
SLC38A1-204ENST00000546893 MT1XP80297 61 aa5.41□□□□□ -1.54
SLC38A1-204ENST00000546893 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
SLC38A1-204ENST00000546893 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
SLC38A1-204ENST00000546893 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.56
SLC38A1-204ENST00000546893 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
SLC38A1-204ENST00000546893 LCE2BO14633 110 aa5.13□□□□□ -1.59
SLC38A1-204ENST00000546893 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
SLC38A1-204ENST00000546893 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
SLC38A1-204ENST00000546893 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
SLC38A1-204ENST00000546893 USH2AO75445 5202 aa4.96□□□□□ -1.62
SLC38A1-204ENST00000546893 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
SLC38A1-204ENST00000546893 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
SLC38A1-204ENST00000546893 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
SLC38A1-204ENST00000546893 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
SLC38A1-204ENST00000546893 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
SLC38A1-204ENST00000546893 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
SLC38A1-204ENST00000546893 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
SLC38A1-204ENST00000546893 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
SLC38A1-204ENST00000546893 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
SLC38A1-204ENST00000546893 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
SLC38A1-204ENST00000546893 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
SLC38A1-204ENST00000546893 MT1LQ93083 61 aa4.72□□□□□ -1.65
SLC38A1-204ENST00000546893 MT1EP04732 61 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms