RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 H1FX-AS1Q4G0G2 97 aa4.34□□□□□ -1.71
UBR1-202ENST00000546274 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.72
UBR1-202ENST00000546274 KRTAP10-1P60331 282 aa4.33□□□□□ -1.72
UBR1-202ENST00000546274 A0A1B0GVY2 172 aa4.33□□□□□ -1.72
UBR1-202ENST00000546274 LORP23490 312 aaPredicted RBP4.32□□□□□ -1.72
UBR1-202ENST00000546274 RYR3Q15413 4870 aa4.3□□□□□ -1.72
UBR1-202ENST00000546274 PKHD1P08F94 4074 aa4.28□□□□□ -1.72
UBR1-202ENST00000546274 A0A0D9SG42 100 aa4.28□□□□□ -1.72
UBR1-202ENST00000546274 COX6B2Q6YFQ2 88 aa4.25□□□□□ -1.73
UBR1-202ENST00000546274 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
UBR1-202ENST00000546274 PKHD1L1Q86WI1 4243 aa4.21□□□□□ -1.74
UBR1-202ENST00000546274 BIRC6Q9NR09 4857 aa4.19□□□□□ -1.74
UBR1-202ENST00000546274 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
UBR1-202ENST00000546274 RPS29P62273 56 aaKnown RBP4.17□□□□□ -1.74
UBR1-202ENST00000546274 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
UBR1-202ENST00000546274 EPPK1P58107 5090 aaKnown RBP4.15□□□□□ -1.75
UBR1-202ENST00000546274 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
UBR1-202ENST00000546274 FAT1Q14517 4588 aa4.13□□□□□ -1.75
UBR1-202ENST00000546274 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
UBR1-202ENST00000546274 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
UBR1-202ENST00000546274 C9orf92A6NGG3 77 aa4.11□□□□□ -1.75
UBR1-202ENST00000546274 SMR3BP02814 79 aaPredicted RBP4.11□□□□□ -1.75
UBR1-202ENST00000546274 Q5VSD8 79 aa4.09□□□□□ -1.76
UBR1-202ENST00000546274 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
UBR1-202ENST00000546274 HERC2O95714 4834 aa4.07□□□□□ -1.76
UBR1-202ENST00000546274 S4R3F8 94 aa4.06□□□□□ -1.76
UBR1-202ENST00000546274 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
UBR1-202ENST00000546274 TNXBP22105 4242 aa4.04□□□□□ -1.76
UBR1-202ENST00000546274 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
UBR1-202ENST00000546274 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
UBR1-202ENST00000546274 RYR1P21817 5038 aa4.04□□□□□ -1.76
UBR1-202ENST00000546274 HSPG2P98160 4391 aa4.02□□□□□ -1.77
UBR1-202ENST00000546274 KRTAP4-5Q9BYR2 181 aa4.02□□□□□ -1.77
UBR1-202ENST00000546274 LRP1Q07954 4544 aaKnown RBP4.01□□□□□ -1.77
UBR1-202ENST00000546274 KIAA1109Q2LD37 5005 aa4.01□□□□□ -1.77
UBR1-202ENST00000546274 KRTAP17-1Q9BYP8 105 aa4.01□□□□□ -1.77
UBR1-202ENST00000546274 PLAC4Q8WY50 150 aa4□□□□□ -1.77
UBR1-202ENST00000546274 XP32Q5T750 250 aa3.97□□□□□ -1.77
UBR1-202ENST00000546274 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
UBR1-202ENST00000546274 KRTAP10-8P60410 259 aa3.93□□□□□ -1.78
UBR1-202ENST00000546274 MYCBP2O75592 4640 aa3.9□□□□□ -1.78
UBR1-202ENST00000546274 LPAP08519 4548 aa3.88□□□□□ -1.79
UBR1-202ENST00000546274 ABCA13Q86UQ4 5058 aa3.88□□□□□ -1.79
UBR1-202ENST00000546274 MT1HL1P0DM35 61 aa3.86□□□□□ -1.79
UBR1-202ENST00000546274 PCLOQ9Y6V0 5065 aa3.86□□□□□ -1.79
UBR1-202ENST00000546274 LRP2P98164 4655 aa3.8□□□□□ -1.8
UBR1-202ENST00000546274 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
UBR1-202ENST00000546274 M0QZ58 72 aa3.72□□□□□ -1.81
UBR1-202ENST00000546274 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
UBR1-202ENST00000546274 MUC17Q685J3 4493 aa3.67□□□□□ -1.82
UBR1-202ENST00000546274 HERC1Q15751 4861 aa3.66□□□□□ -1.82
UBR1-202ENST00000546274 R4GN34 69 aa3.65□□□□□ -1.82
UBR1-202ENST00000546274 KRTAP23-1A1A580 65 aa3.64□□□□□ -1.83
UBR1-202ENST00000546274 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
UBR1-202ENST00000546274 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
UBR1-202ENST00000546274 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.84
UBR1-202ENST00000546274 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
UBR1-202ENST00000546274 MUC2Q02817 5179 aa3.51□□□□□ -1.85
UBR1-202ENST00000546274 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
UBR1-202ENST00000546274 INE1O15225 51 aa3.48□□□□□ -1.85
UBR1-202ENST00000546274 FLGP20930 4061 aaPredicted RBP3.47□□□□□ -1.85
UBR1-202ENST00000546274 UBR4Q5T4S7 5183 aa3.44□□□□□ -1.86
UBR1-202ENST00000546274 TNP1P09430 55 aa3.41□□□□□ -1.86
UBR1-202ENST00000546274 RNF213Q63HN8 5207 aa3.4□□□□□ -1.87
UBR1-202ENST00000546274 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
UBR1-202ENST00000546274 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
UBR1-202ENST00000546274 MT1HP80294 61 aa3.27□□□□□ -1.89
UBR1-202ENST00000546274 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
UBR1-202ENST00000546274 M0R2T5 61 aa3.24□□□□□ -1.89
UBR1-202ENST00000546274 KRTAP19-1Q8IUB9 90 aa3.24□□□□□ -1.89
UBR1-202ENST00000546274 KRTAP9-6A0A140TA67 174 aa3.21□□□□□ -1.9
UBR1-202ENST00000546274 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
UBR1-202ENST00000546274 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
UBR1-202ENST00000546274 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
UBR1-202ENST00000546274 MT1FP04733 61 aa3.15□□□□□ -1.9
UBR1-202ENST00000546274 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.9
UBR1-202ENST00000546274 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.9
UBR1-202ENST00000546274 MT2AP02795 61 aa3.14□□□□□ -1.91
UBR1-202ENST00000546274 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
UBR1-202ENST00000546274 KRTAP10-10P60014 251 aa3.09□□□□□ -1.92
UBR1-202ENST00000546274 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.92
UBR1-202ENST00000546274 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
UBR1-202ENST00000546274 MT1BP07438 61 aa3.06□□□□□ -1.92
UBR1-202ENST00000546274 MT1XP80297 61 aa3.05□□□□□ -1.92
UBR1-202ENST00000546274 KRTAP8-1Q8IUC2 63 aa3.04□□□□□ -1.92
UBR1-202ENST00000546274 CRCT1Q9UGL9 99 aa3.04□□□□□ -1.92
UBR1-202ENST00000546274 KRTAP9-3Q9BYQ3 159 aa3.01□□□□□ -1.93
UBR1-202ENST00000546274 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
UBR1-202ENST00000546274 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
UBR1-202ENST00000546274 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
UBR1-202ENST00000546274 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
UBR1-202ENST00000546274 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
UBR1-202ENST00000546274 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.93
UBR1-202ENST00000546274 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
UBR1-202ENST00000546274 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
UBR1-202ENST00000546274 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
UBR1-202ENST00000546274 KRTAP4-8Q9BYQ9 185 aa2.91□□□□□ -1.94
UBR1-202ENST00000546274 KRTAP19-6Q3LI70 58 aa2.9□□□□□ -1.95
UBR1-202ENST00000546274 USH2AO75445 5202 aa2.88□□□□□ -1.95
UBR1-202ENST00000546274 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms