RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 A0A087WVE0 104 aa1.88□□□□□ -2.11
CUL3-215ENST00000546102 A0A0G2JQZ4 141 aa1.88□□□□□ -2.11
CUL3-215ENST00000546102 RPS29P62273 56 aaKnown RBP1.88□□□□□ -2.11
CUL3-215ENST00000546102 SPAG11AQ6PDA7 123 aa1.88□□□□□ -2.11
CUL3-215ENST00000546102 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
CUL3-215ENST00000546102 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
CUL3-215ENST00000546102 SRRM2Q9UQ35 2752 aaKnown RBP1.87□□□□□ -2.11
CUL3-215ENST00000546102 FAT3Q8TDW7 4589 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 TRAV7A0A075B6U4 112 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 HCG22E2RYF7 251 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 K7EQZ3 153 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 SPINK1P00995 79 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 IGKV4-1P06312 121 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 KRTAP10-4P60372 401 aaPredicted RBP1.87□□□□□ -2.11
CUL3-215ENST00000546102 ASB16-AS1Q495Z4 193 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 Q5XG85 94 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 LINC00304Q8N9R0 145 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 LINC00472Q9H8W2 130 aa1.87□□□□□ -2.11
CUL3-215ENST00000546102 PRR15Q8IV56 129 aa1.86□□□□□ -2.11
CUL3-215ENST00000546102 Q96NJ1 140 aa1.86□□□□□ -2.11
CUL3-215ENST00000546102 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
CUL3-215ENST00000546102 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
CUL3-215ENST00000546102 CASC2Q6XLA1 102 aa1.85□□□□□ -2.11
CUL3-215ENST00000546102 SERP2Q8N6R1 65 aa1.85□□□□□ -2.11
CUL3-215ENST00000546102 MYCBP2O75592 4640 aa1.84□□□□□ -2.11
CUL3-215ENST00000546102 ABCA13Q86UQ4 5058 aa1.84□□□□□ -2.11
CUL3-215ENST00000546102 HERC2O95714 4834 aa1.84□□□□□ -2.11
CUL3-215ENST00000546102 MMP24-AS1A0A0U1RRL7 71 aa1.84□□□□□ -2.11
CUL3-215ENST00000546102 hDV103S1A0JD37 113 aa1.84□□□□□ -2.11
CUL3-215ENST00000546102 UQCRQO14949 82 aa1.84□□□□□ -2.11
CUL3-215ENST00000546102 COX7CP15954 63 aa1.84□□□□□ -2.11
CUL3-215ENST00000546102 WFDC13Q8IUB5 93 aa1.84□□□□□ -2.11
CUL3-215ENST00000546102 LRP1Q07954 4544 aaKnown RBP1.83□□□□□ -2.12
CUL3-215ENST00000546102 TMEM254Q8TBM7 123 aa1.83□□□□□ -2.12
CUL3-215ENST00000546102 TP53AIP1Q9HCN2 124 aa1.83□□□□□ -2.12
CUL3-215ENST00000546102 MRPL34Q9BQ48 92 aaKnown RBP1.82□□□□□ -2.12
CUL3-215ENST00000546102 PCLOQ9Y6V0 5065 aa1.81□□□□□ -2.12
CUL3-215ENST00000546102 TRAV22A0A0B4J277 110 aa1.81□□□□□ -2.12
CUL3-215ENST00000546102 CCDC179H3BU77 68 aa1.81□□□□□ -2.12
CUL3-215ENST00000546102 NDUFC1O43677 76 aa1.81□□□□□ -2.12
CUL3-215ENST00000546102 TMEM258P61165 79 aa1.81□□□□□ -2.12
CUL3-215ENST00000546102 FP248Q71RG6 208 aaPredicted RBP1.81□□□□□ -2.12
CUL3-215ENST00000546102 C20orf197Q8N268 126 aa1.81□□□□□ -2.12
CUL3-215ENST00000546102 H0Y9P7 68 aa1.8□□□□□ -2.12
CUL3-215ENST00000546102 KLKP1Q107X0 134 aa1.8□□□□□ -2.12
CUL3-215ENST00000546102 C20orf166-AS1Q96NR2 134 aa1.8□□□□□ -2.12
CUL3-215ENST00000546102 ATP5EP56381 51 aaPredicted RBP1.79□□□□□ -2.12
CUL3-215ENST00000546102 RPS28P62857 69 aaKnown RBP1.79□□□□□ -2.12
CUL3-215ENST00000546102 RETNLBQ9BQ08 111 aa1.79□□□□□ -2.12
CUL3-215ENST00000546102 LOC101927531A0A1B0GV80 90 aa1.78□□□□□ -2.12
CUL3-215ENST00000546102 MT1HL1P0DM35 61 aa1.78□□□□□ -2.12
CUL3-215ENST00000546102 SNURFQ9Y675 71 aa1.78□□□□□ -2.12
CUL3-215ENST00000546102 C9orf92A6NGG3 77 aa1.77□□□□□ -2.13
CUL3-215ENST00000546102 P0C880 135 aa1.77□□□□□ -2.13
CUL3-215ENST00000546102 LINC00208Q96KT6 92 aa1.77□□□□□ -2.13
CUL3-215ENST00000546102 PRO2289Q9P1D8 64 aa1.77□□□□□ -2.13
CUL3-215ENST00000546102 H7BZZ5 65 aa1.76□□□□□ -2.13
CUL3-215ENST00000546102 ZCCHC13Q8WW36 166 aaKnown RBP1.76□□□□□ -2.13
CUL3-215ENST00000546102 FLG2Q5D862 2391 aaPredicted RBP1.76□□□□□ -2.13
CUL3-215ENST00000546102 SPRR5A0A1B0GTR4 108 aa1.75□□□□□ -2.13
CUL3-215ENST00000546102 TPRXLQ17RH7 258 aa1.75□□□□□ -2.13
CUL3-215ENST00000546102 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
CUL3-215ENST00000546102 CYSTM1Q9H1C7 97 aa1.75□□□□□ -2.13
CUL3-215ENST00000546102 HMCN2Q8NDA2 5059 aa1.74□□□□□ -2.13
CUL3-215ENST00000546102 ATP11AUNQ6ZP68 121 aa1.74□□□□□ -2.13
CUL3-215ENST00000546102 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
CUL3-215ENST00000546102 RPL37P61927 97 aaKnown RBP1.73□□□□□ -2.13
CUL3-215ENST00000546102 PCOTHQ58A44 107 aa1.73□□□□□ -2.13
CUL3-215ENST00000546102 CYP4F30PQ9H0H9 118 aa1.73□□□□□ -2.13
CUL3-215ENST00000546102 SERP1Q9Y6X1 66 aa1.73□□□□□ -2.13
CUL3-215ENST00000546102 HERC1Q15751 4861 aa1.72□□□□□ -2.13
CUL3-215ENST00000546102 MUC17Q685J3 4493 aa1.72□□□□□ -2.13
CUL3-215ENST00000546102 BRK1Q8WUW1 75 aa1.72□□□□□ -2.13
CUL3-215ENST00000546102 LPAP08519 4548 aa1.72□□□□□ -2.13
CUL3-215ENST00000546102 DMBT1Q9UGM3 2413 aaPredicted RBP1.71□□□□□ -2.14
CUL3-215ENST00000546102 DMAC1Q96GE9 116 aa1.7□□□□□ -2.14
CUL3-215ENST00000546102 LRP2P98164 4655 aa1.69□□□□□ -2.14
CUL3-215ENST00000546102 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
CUL3-215ENST00000546102 CHKB-CPT1BH3BT56 60 aa1.69□□□□□ -2.14
CUL3-215ENST00000546102 ACYP2P14621 99 aa1.69□□□□□ -2.14
CUL3-215ENST00000546102 SPINK7P58062 85 aa1.69□□□□□ -2.14
CUL3-215ENST00000546102 COA5Q86WW8 74 aa1.69□□□□□ -2.14
CUL3-215ENST00000546102 UBR4Q5T4S7 5183 aa1.68□□□□□ -2.14
CUL3-215ENST00000546102 ROMO1P60602 79 aa1.68□□□□□ -2.14
CUL3-215ENST00000546102 SPTSSBQ8NFR3 76 aa1.68□□□□□ -2.14
CUL3-215ENST00000546102 PP632Q6XCG6 107 aa1.67□□□□□ -2.14
CUL3-215ENST00000546102 Q1T7F1 81 aa1.66□□□□□ -2.14
CUL3-215ENST00000546102 COX6B2Q6YFQ2 88 aa1.66□□□□□ -2.14
CUL3-215ENST00000546102 RNF213Q63HN8 5207 aa1.65□□□□□ -2.14
CUL3-215ENST00000546102 MUC2Q02817 5179 aa1.65□□□□□ -2.15
CUL3-215ENST00000546102 PRR15LQ9BU68 103 aa1.64□□□□□ -2.15
CUL3-215ENST00000546102 LCE3DQ9BYE3 92 aa1.63□□□□□ -2.15
CUL3-215ENST00000546102 S4R3F8 94 aa1.63□□□□□ -2.15
CUL3-215ENST00000546102 H1FX-AS1Q4G0G2 97 aa1.62□□□□□ -2.15
CUL3-215ENST00000546102 A0A1B0GU69 56 aa1.61□□□□□ -2.15
CUL3-215ENST00000546102 LINC01558Q9Y6Z2 57 aa1.61□□□□□ -2.15
CUL3-215ENST00000546102 KRTAP10-10P60014 251 aa1.59□□□□□ -2.15
CUL3-215ENST00000546102 FLGP20930 4061 aaPredicted RBP1.59□□□□□ -2.15
CUL3-215ENST00000546102 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.16
CUL3-215ENST00000546102 Q5VV11 94 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms