RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
CLSTN3-216ENST00000545663 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
CLSTN3-216ENST00000545663 SCGB1A1P11684 91 aa7.06□□□□□ -1.28
CLSTN3-216ENST00000545663 SPRR2FQ96RM1 72 aa7.06□□□□□ -1.28
CLSTN3-216ENST00000545663 Q5W150 140 aa7.05□□□□□ -1.28
CLSTN3-216ENST00000545663 TRAV22A0A0B4J277 110 aa7.04□□□□□ -1.28
CLSTN3-216ENST00000545663 ATOX1O00244 68 aa7.04□□□□□ -1.28
CLSTN3-216ENST00000545663 MT-ATP8P03928 68 aa7.04□□□□□ -1.28
CLSTN3-216ENST00000545663 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
CLSTN3-216ENST00000545663 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
CLSTN3-216ENST00000545663 SMIM20Q8N5G0 67 aa7.01□□□□□ -1.29
CLSTN3-216ENST00000545663 LOC101927531A0A1B0GV80 90 aa6.99□□□□□ -1.29
CLSTN3-216ENST00000545663 MP68P56378 58 aa6.98□□□□□ -1.29
CLSTN3-216ENST00000545663 C5orf47Q569G3 176 aa6.98□□□□□ -1.29
CLSTN3-216ENST00000545663 OCR1Q9BZK8 76 aa6.98□□□□□ -1.29
CLSTN3-216ENST00000545663 LCE1AQ5T7P2 110 aa6.97□□□□□ -1.29
CLSTN3-216ENST00000545663 Q5VV11 94 aa6.97□□□□□ -1.29
CLSTN3-216ENST00000545663 H0Y9P7 68 aa6.96□□□□□ -1.3
CLSTN3-216ENST00000545663 H3BPC8 53 aa6.95□□□□□ -1.3
CLSTN3-216ENST00000545663 FAM236AA0A1B0GUQ0 79 aa6.94□□□□□ -1.3
CLSTN3-216ENST00000545663 FAM236BA0A1B0GV22 79 aa6.94□□□□□ -1.3
CLSTN3-216ENST00000545663 SPRR2DP22532 72 aa6.93□□□□□ -1.3
CLSTN3-216ENST00000545663 CYP4F30PQ9H0H9 118 aa6.92□□□□□ -1.3
CLSTN3-216ENST00000545663 TRAV7A0A075B6U4 112 aa6.9□□□□□ -1.3
CLSTN3-216ENST00000545663 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
CLSTN3-216ENST00000545663 C1orf64Q8NEQ6 169 aa6.9□□□□□ -1.3
CLSTN3-216ENST00000545663 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
CLSTN3-216ENST00000545663 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
CLSTN3-216ENST00000545663 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
CLSTN3-216ENST00000545663 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
CLSTN3-216ENST00000545663 SERP2Q8N6R1 65 aa6.8□□□□□ -1.32
CLSTN3-216ENST00000545663 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
CLSTN3-216ENST00000545663 A8MUN3 132 aa6.77□□□□□ -1.33
CLSTN3-216ENST00000545663 DSTQ03001 7570 aaKnown RBP6.76□□□□□ -1.33
CLSTN3-216ENST00000545663 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
CLSTN3-216ENST00000545663 KLKP1Q107X0 134 aa6.71□□□□□ -1.34
CLSTN3-216ENST00000545663 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
CLSTN3-216ENST00000545663 COX7CP15954 63 aa6.68□□□□□ -1.34
CLSTN3-216ENST00000545663 S4R3F8 94 aa6.68□□□□□ -1.34
CLSTN3-216ENST00000545663 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
CLSTN3-216ENST00000545663 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
CLSTN3-216ENST00000545663 ANAPC13Q9BS18 74 aa6.64□□□□□ -1.35
CLSTN3-216ENST00000545663 SNURFQ9Y675 71 aa6.64□□□□□ -1.35
CLSTN3-216ENST00000545663 NDUFC1O43677 76 aa6.63□□□□□ -1.35
CLSTN3-216ENST00000545663 CSAG1Q6PB30 78 aa6.63□□□□□ -1.35
CLSTN3-216ENST00000545663 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
CLSTN3-216ENST00000545663 DMAC1Q96GE9 116 aa6.62□□□□□ -1.35
CLSTN3-216ENST00000545663 ACYP2P14621 99 aa6.58□□□□□ -1.36
CLSTN3-216ENST00000545663 LCA10Q71F78 164 aa6.58□□□□□ -1.36
CLSTN3-216ENST00000545663 KRTAP4-8A0A0G2JLE6 195 aa6.52□□□□□ -1.37
CLSTN3-216ENST00000545663 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
CLSTN3-216ENST00000545663 SPTSSBQ8NFR3 76 aa6.5□□□□□ -1.37
CLSTN3-216ENST00000545663 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
CLSTN3-216ENST00000545663 HMCN1Q96RW7 5635 aa6.47□□□□□ -1.37
CLSTN3-216ENST00000545663 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
CLSTN3-216ENST00000545663 H7BZZ5 65 aa6.46□□□□□ -1.38
CLSTN3-216ENST00000545663 AHNAK2Q8IVF2 5795 aa6.45□□□□□ -1.38
CLSTN3-216ENST00000545663 H0YAA0 97 aa6.44□□□□□ -1.38
CLSTN3-216ENST00000545663 MT1XP80297 61 aa6.44□□□□□ -1.38
CLSTN3-216ENST00000545663 CCDC179H3BU77 68 aa6.41□□□□□ -1.38
CLSTN3-216ENST00000545663 ATP5EP56381 51 aaPredicted RBP6.4□□□□□ -1.38
CLSTN3-216ENST00000545663 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
CLSTN3-216ENST00000545663 CYSTM1Q9H1C7 97 aa6.37□□□□□ -1.39
CLSTN3-216ENST00000545663 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
CLSTN3-216ENST00000545663 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
CLSTN3-216ENST00000545663 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
CLSTN3-216ENST00000545663 KRTAP5-10Q6L8G5 202 aa6.33□□□□□ -1.4
CLSTN3-216ENST00000545663 COA5Q86WW8 74 aa6.33□□□□□ -1.4
CLSTN3-216ENST00000545663 TMEM258P61165 79 aa6.32□□□□□ -1.4
CLSTN3-216ENST00000545663 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
CLSTN3-216ENST00000545663 SEC61GP60059 68 aa6.21□□□□□ -1.42
CLSTN3-216ENST00000545663 MT4P47944 62 aa6.19□□□□□ -1.42
CLSTN3-216ENST00000545663 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
CLSTN3-216ENST00000545663 R4GN34 69 aa6.17□□□□□ -1.42
CLSTN3-216ENST00000545663 PCP4P48539 62 aa6.16□□□□□ -1.42
CLSTN3-216ENST00000545663 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
CLSTN3-216ENST00000545663 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
CLSTN3-216ENST00000545663 SERP1Q9Y6X1 66 aa6.16□□□□□ -1.42
CLSTN3-216ENST00000545663 P0C880 135 aa6.15□□□□□ -1.42
CLSTN3-216ENST00000545663 M0QZ58 72 aa6.11□□□□□ -1.43
CLSTN3-216ENST00000545663 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
CLSTN3-216ENST00000545663 PLAC4Q8WY50 150 aa6.09□□□□□ -1.43
CLSTN3-216ENST00000545663 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
CLSTN3-216ENST00000545663 A0A1B0GU69 56 aa6.06□□□□□ -1.44
CLSTN3-216ENST00000545663 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
CLSTN3-216ENST00000545663 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
CLSTN3-216ENST00000545663 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
CLSTN3-216ENST00000545663 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
CLSTN3-216ENST00000545663 A0A1B0GU33 70 aa5.98□□□□□ -1.45
CLSTN3-216ENST00000545663 V9GYY9 64 aa5.98□□□□□ -1.45
CLSTN3-216ENST00000545663 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
CLSTN3-216ENST00000545663 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
CLSTN3-216ENST00000545663 RPS28P62857 69 aaKnown RBP5.94□□□□□ -1.46
CLSTN3-216ENST00000545663 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
CLSTN3-216ENST00000545663 SMIM26A0A096LP01 95 aa5.9□□□□□ -1.46
CLSTN3-216ENST00000545663 Q1T7F1 81 aa5.87□□□□□ -1.47
CLSTN3-216ENST00000545663 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
CLSTN3-216ENST00000545663 KRTAP19-3Q7Z4W3 81 aa5.85□□□□□ -1.47
CLSTN3-216ENST00000545663 UQCR11O14957 56 aa5.83□□□□□ -1.48
CLSTN3-216ENST00000545663 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms