RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
DDX47-212ENST00000545038 TPRXLQ17RH7 258 aa4.17□□□□□ -1.74
DDX47-212ENST00000545038 DYNC1H1Q14204 4646 aaKnown RBP4.16□□□□□ -1.74
DDX47-212ENST00000545038 HSPG2P98160 4391 aa4.16□□□□□ -1.74
DDX47-212ENST00000545038 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
DDX47-212ENST00000545038 APOBP04114 4563 aaKnown RBP4.15□□□□□ -1.75
DDX47-212ENST00000545038 J3QL48 77 aa4.13□□□□□ -1.75
DDX47-212ENST00000545038 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
DDX47-212ENST00000545038 K7ERS5 55 aa4.12□□□□□ -1.75
DDX47-212ENST00000545038 RPS29P62273 56 aaKnown RBP4.12□□□□□ -1.75
DDX47-212ENST00000545038 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
DDX47-212ENST00000545038 A0A0D9SG42 100 aa4.1□□□□□ -1.75
DDX47-212ENST00000545038 RPL37P61927 97 aaKnown RBP4.1□□□□□ -1.75
DDX47-212ENST00000545038 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
DDX47-212ENST00000545038 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
DDX47-212ENST00000545038 LRP1Q07954 4544 aaKnown RBP4.07□□□□□ -1.76
DDX47-212ENST00000545038 SPINT4Q6UDR6 99 aa4.06□□□□□ -1.76
DDX47-212ENST00000545038 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
DDX47-212ENST00000545038 SMR3BP02814 79 aaPredicted RBP4.05□□□□□ -1.76
DDX47-212ENST00000545038 KRTAP4-8Q9BYQ9 185 aa4.04□□□□□ -1.76
DDX47-212ENST00000545038 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
DDX47-212ENST00000545038 KRTAP10-8P60410 259 aa4.03□□□□□ -1.76
DDX47-212ENST00000545038 LPAP08519 4548 aa4.03□□□□□ -1.76
DDX47-212ENST00000545038 TNXBP22105 4242 aa4.03□□□□□ -1.76
DDX47-212ENST00000545038 KRTAP10-4P60372 401 aaPredicted RBP4.02□□□□□ -1.77
DDX47-212ENST00000545038 S4R3F8 94 aa4□□□□□ -1.77
DDX47-212ENST00000545038 KRTAP17-1Q9BYP8 105 aa3.99□□□□□ -1.77
DDX47-212ENST00000545038 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
DDX47-212ENST00000545038 KMT2CQ8NEZ4 4911 aaKnown RBP3.94□□□□□ -1.78
DDX47-212ENST00000545038 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
DDX47-212ENST00000545038 LRP2P98164 4655 aa3.9□□□□□ -1.78
DDX47-212ENST00000545038 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.79
DDX47-212ENST00000545038 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
DDX47-212ENST00000545038 KRTAP9-2Q9BYQ4 174 aa3.89□□□□□ -1.79
DDX47-212ENST00000545038 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
DDX47-212ENST00000545038 KRTAP4-8A0A0G2JLE6 195 aa3.88□□□□□ -1.79
DDX47-212ENST00000545038 KRTAP9-8Q9BYQ0 159 aa3.88□□□□□ -1.79
DDX47-212ENST00000545038 A0A1B0GVY2 172 aa3.85□□□□□ -1.79
DDX47-212ENST00000545038 RYR2Q92736 4967 aa3.85□□□□□ -1.79
DDX47-212ENST00000545038 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
DDX47-212ENST00000545038 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
DDX47-212ENST00000545038 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
DDX47-212ENST00000545038 RYR1P21817 5038 aa3.79□□□□□ -1.8
DDX47-212ENST00000545038 M0QZ58 72 aa3.78□□□□□ -1.8
DDX47-212ENST00000545038 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
DDX47-212ENST00000545038 PLAC4Q8WY50 150 aa3.74□□□□□ -1.81
DDX47-212ENST00000545038 ABCA13Q86UQ4 5058 aa3.74□□□□□ -1.81
DDX47-212ENST00000545038 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.81
DDX47-212ENST00000545038 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
DDX47-212ENST00000545038 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
DDX47-212ENST00000545038 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
DDX47-212ENST00000545038 RYR3Q15413 4870 aa3.69□□□□□ -1.82
DDX47-212ENST00000545038 Q5VSD8 79 aa3.68□□□□□ -1.82
DDX47-212ENST00000545038 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
DDX47-212ENST00000545038 MT1HL1P0DM35 61 aa3.68□□□□□ -1.82
DDX47-212ENST00000545038 R4GN34 69 aa3.68□□□□□ -1.82
DDX47-212ENST00000545038 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
DDX47-212ENST00000545038 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
DDX47-212ENST00000545038 MUC2Q02817 5179 aa3.58□□□□□ -1.84
DDX47-212ENST00000545038 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
DDX47-212ENST00000545038 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
DDX47-212ENST00000545038 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
DDX47-212ENST00000545038 EPPK1P58107 5090 aaKnown RBP3.54□□□□□ -1.84
DDX47-212ENST00000545038 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
DDX47-212ENST00000545038 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
DDX47-212ENST00000545038 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
DDX47-212ENST00000545038 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
DDX47-212ENST00000545038 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
DDX47-212ENST00000545038 PCLOQ9Y6V0 5065 aa3.48□□□□□ -1.85
DDX47-212ENST00000545038 FLGP20930 4061 aaPredicted RBP3.47□□□□□ -1.85
DDX47-212ENST00000545038 KRTAP4-5Q9BYR2 181 aa3.43□□□□□ -1.86
DDX47-212ENST00000545038 TNP1P09430 55 aa3.39□□□□□ -1.87
DDX47-212ENST00000545038 SEC61BP60468 96 aaKnown RBP3.39□□□□□ -1.87
DDX47-212ENST00000545038 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
DDX47-212ENST00000545038 HERC1Q15751 4861 aa3.39□□□□□ -1.87
DDX47-212ENST00000545038 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
DDX47-212ENST00000545038 HERC2O95714 4834 aa3.33□□□□□ -1.88
DDX47-212ENST00000545038 BIRC6Q9NR09 4857 aa3.3□□□□□ -1.88
DDX47-212ENST00000545038 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
DDX47-212ENST00000545038 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
DDX47-212ENST00000545038 KRTAP19-1Q8IUB9 90 aa3.25□□□□□ -1.89
DDX47-212ENST00000545038 UBR4Q5T4S7 5183 aa3.24□□□□□ -1.89
DDX47-212ENST00000545038 PRO2289Q9P1D8 64 aa3.24□□□□□ -1.89
DDX47-212ENST00000545038 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
DDX47-212ENST00000545038 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
DDX47-212ENST00000545038 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
DDX47-212ENST00000545038 RNF213Q63HN8 5207 aa3.16□□□□□ -1.9
DDX47-212ENST00000545038 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
DDX47-212ENST00000545038 INE1O15225 51 aa3.14□□□□□ -1.91
DDX47-212ENST00000545038 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
DDX47-212ENST00000545038 MT1FP04733 61 aa3.1□□□□□ -1.91
DDX47-212ENST00000545038 KRTAP10-5P60370 271 aa3.09□□□□□ -1.92
DDX47-212ENST00000545038 MT1XP80297 61 aa3.08□□□□□ -1.92
DDX47-212ENST00000545038 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
DDX47-212ENST00000545038 MT2AP02795 61 aa3.07□□□□□ -1.92
DDX47-212ENST00000545038 MT1HP80294 61 aa3.05□□□□□ -1.92
DDX47-212ENST00000545038 MT1BP07438 61 aa3.04□□□□□ -1.92
DDX47-212ENST00000545038 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
DDX47-212ENST00000545038 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
DDX47-212ENST00000545038 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms