RNA–Protein interactions for RNA: ENST00000544254.1

PSMD9-210, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 1,481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-210ENST00000544254 BRK1Q8WUW1 75 aa6.54□□□□□ -1.36
PSMD9-210ENST00000544254 S4R3F8 94 aa6.54□□□□□ -1.36
PSMD9-210ENST00000544254 A6NED7 52 aa6.53□□□□□ -1.36
PSMD9-210ENST00000544254 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
PSMD9-210ENST00000544254 LCA10Q71F78 164 aa6.48□□□□□ -1.37
PSMD9-210ENST00000544254 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
PSMD9-210ENST00000544254 LRP2P98164 4655 aa6.45□□□□□ -1.38
PSMD9-210ENST00000544254 UQCR11O14957 56 aa6.45□□□□□ -1.38
PSMD9-210ENST00000544254 KRTAP3-3Q9BYR6 98 aa6.45□□□□□ -1.38
PSMD9-210ENST00000544254 LPAP08519 4548 aa6.44□□□□□ -1.38
PSMD9-210ENST00000544254 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
PSMD9-210ENST00000544254 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
PSMD9-210ENST00000544254 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
PSMD9-210ENST00000544254 MUC17Q685J3 4493 aa6.38□□□□□ -1.39
PSMD9-210ENST00000544254 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
PSMD9-210ENST00000544254 A0A1B0GU33 70 aa6.35□□□□□ -1.39
PSMD9-210ENST00000544254 PCLOQ9Y6V0 5065 aa6.34□□□□□ -1.39
PSMD9-210ENST00000544254 H0YAA0 97 aa6.29□□□□□ -1.4
PSMD9-210ENST00000544254 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
PSMD9-210ENST00000544254 A8MU10 97 aa6.28□□□□□ -1.4
PSMD9-210ENST00000544254 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
PSMD9-210ENST00000544254 KRTAP19-2Q3LHN2 52 aa6.27□□□□□ -1.41
PSMD9-210ENST00000544254 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
PSMD9-210ENST00000544254 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
PSMD9-210ENST00000544254 ADM2Q7Z4H4 148 aa6.23□□□□□ -1.41
PSMD9-210ENST00000544254 HERC1Q15751 4861 aa6.21□□□□□ -1.41
PSMD9-210ENST00000544254 PMAIP1Q13794 54 aa6.21□□□□□ -1.42
PSMD9-210ENST00000544254 P0C880 135 aa6.18□□□□□ -1.42
PSMD9-210ENST00000544254 M0QZ58 72 aa6.15□□□□□ -1.42
PSMD9-210ENST00000544254 A6NN06 94 aa6.14□□□□□ -1.43
PSMD9-210ENST00000544254 K7ERS5 55 aa6.13□□□□□ -1.43
PSMD9-210ENST00000544254 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.44
PSMD9-210ENST00000544254 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
PSMD9-210ENST00000544254 R4GN34 69 aa6.03□□□□□ -1.44
PSMD9-210ENST00000544254 KTN1-AS1Q86SY8 53 aa6.02□□□□□ -1.45
PSMD9-210ENST00000544254 A0A0D9SG42 100 aa6.01□□□□□ -1.45
PSMD9-210ENST00000544254 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
PSMD9-210ENST00000544254 CRIPTQ9P021 101 aa6□□□□□ -1.45
PSMD9-210ENST00000544254 MT1HP80294 61 aa5.96□□□□□ -1.46
PSMD9-210ENST00000544254 MUC2Q02817 5179 aa5.95□□□□□ -1.46
PSMD9-210ENST00000544254 M0R2T5 61 aa5.95□□□□□ -1.46
PSMD9-210ENST00000544254 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
PSMD9-210ENST00000544254 KRTAP12-1P59990 96 aa5.9□□□□□ -1.46
PSMD9-210ENST00000544254 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.47
PSMD9-210ENST00000544254 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
PSMD9-210ENST00000544254 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
PSMD9-210ENST00000544254 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
PSMD9-210ENST00000544254 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
PSMD9-210ENST00000544254 ROMO1P60602 79 aa5.83□□□□□ -1.48
PSMD9-210ENST00000544254 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
PSMD9-210ENST00000544254 MT2AP02795 61 aa5.75□□□□□ -1.49
PSMD9-210ENST00000544254 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
PSMD9-210ENST00000544254 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
PSMD9-210ENST00000544254 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
PSMD9-210ENST00000544254 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
PSMD9-210ENST00000544254 MT1FP04733 61 aa5.71□□□□□ -1.5
PSMD9-210ENST00000544254 CAMK2N1Q7Z7J9 78 aa5.67□□□□□ -1.5
PSMD9-210ENST00000544254 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
PSMD9-210ENST00000544254 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
PSMD9-210ENST00000544254 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
PSMD9-210ENST00000544254 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
PSMD9-210ENST00000544254 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
PSMD9-210ENST00000544254 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
PSMD9-210ENST00000544254 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
PSMD9-210ENST00000544254 MT1BP07438 61 aa5.45□□□□□ -1.54
PSMD9-210ENST00000544254 TNP1P09430 55 aa5.45□□□□□ -1.54
PSMD9-210ENST00000544254 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
PSMD9-210ENST00000544254 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
PSMD9-210ENST00000544254 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
PSMD9-210ENST00000544254 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
PSMD9-210ENST00000544254 LCE2BO14633 110 aa5.38□□□□□ -1.55
PSMD9-210ENST00000544254 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
PSMD9-210ENST00000544254 MT1XP80297 61 aa5.31□□□□□ -1.56
PSMD9-210ENST00000544254 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
PSMD9-210ENST00000544254 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
PSMD9-210ENST00000544254 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
PSMD9-210ENST00000544254 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
PSMD9-210ENST00000544254 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
PSMD9-210ENST00000544254 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
PSMD9-210ENST00000544254 USH2AO75445 5202 aa5.03□□□□□ -1.6
PSMD9-210ENST00000544254 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
PSMD9-210ENST00000544254 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
PSMD9-210ENST00000544254 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
PSMD9-210ENST00000544254 KRTAP19-5Q3LI72 72 aa4.82□□□□□ -1.64
PSMD9-210ENST00000544254 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
PSMD9-210ENST00000544254 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
PSMD9-210ENST00000544254 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
PSMD9-210ENST00000544254 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
PSMD9-210ENST00000544254 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
PSMD9-210ENST00000544254 KRTAP9-2Q9BYQ4 174 aa4.75□□□□□ -1.65
PSMD9-210ENST00000544254 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
PSMD9-210ENST00000544254 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
PSMD9-210ENST00000544254 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
PSMD9-210ENST00000544254 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
PSMD9-210ENST00000544254 MT1EP04732 61 aa4.65□□□□□ -1.66
PSMD9-210ENST00000544254 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
PSMD9-210ENST00000544254 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
PSMD9-210ENST00000544254 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
PSMD9-210ENST00000544254 KMT2DO14686 5537 aa4.59□□□□□ -1.67
PSMD9-210ENST00000544254 MT1LQ93083 61 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms