RNA–Protein interactions for RNA: ENST00000544053.5

EMP1-211, Transcript of epithelial membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene EMP1, Length 1,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1-211ENST00000544053 MUC17Q685J3 4493 aa7.85□□□□□ -1.15
EMP1-211ENST00000544053 IGLV9-49A0A0B4J1Y8 123 aa7.85□□□□□ -1.15
EMP1-211ENST00000544053 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
EMP1-211ENST00000544053 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
EMP1-211ENST00000544053 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
EMP1-211ENST00000544053 SSBP3-AS1Q7Z2R9 100 aa7.78□□□□□ -1.16
EMP1-211ENST00000544053 Q5W150 140 aa7.75□□□□□ -1.17
EMP1-211ENST00000544053 IGKV2-30P06310 120 aa7.73□□□□□ -1.17
EMP1-211ENST00000544053 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
EMP1-211ENST00000544053 NOTCH2NLQ7Z3S9 236 aa7.69□□□□□ -1.18
EMP1-211ENST00000544053 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
EMP1-211ENST00000544053 SPINK1P00995 79 aa7.69□□□□□ -1.18
EMP1-211ENST00000544053 PRAC1Q96KF2 57 aa7.69□□□□□ -1.18
EMP1-211ENST00000544053 IGKV2D-30A0A075B6S6 120 aa7.6□□□□□ -1.19
EMP1-211ENST00000544053 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
EMP1-211ENST00000544053 RPS29P62273 56 aaKnown RBP7.59□□□□□ -1.19
EMP1-211ENST00000544053 ADM2Q7Z4H4 148 aa7.59□□□□□ -1.19
EMP1-211ENST00000544053 CSAG1Q6PB30 78 aa7.55□□□□□ -1.2
EMP1-211ENST00000544053 H3BS24 57 aa7.52□□□□□ -1.21
EMP1-211ENST00000544053 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
EMP1-211ENST00000544053 KRTAP16-1A8MUX0 517 aa7.5□□□□□ -1.21
EMP1-211ENST00000544053 XP32Q5T750 250 aa7.5□□□□□ -1.21
EMP1-211ENST00000544053 KRTAP9-6A0A140TA67 174 aa7.49□□□□□ -1.21
EMP1-211ENST00000544053 KRTAP25-1Q3LHN0 102 aa7.44□□□□□ -1.22
EMP1-211ENST00000544053 A8MUU9 505 aa7.42□□□□□ -1.22
EMP1-211ENST00000544053 K7ERS5 55 aa7.42□□□□□ -1.22
EMP1-211ENST00000544053 C9orf92A6NGG3 77 aa7.41□□□□□ -1.22
EMP1-211ENST00000544053 FSIP2Q5CZC0 6907 aa7.38□□□□□ -1.23
EMP1-211ENST00000544053 LCE2DQ5TA82 110 aaPredicted RBP7.36□□□□□ -1.23
EMP1-211ENST00000544053 A0A1B0GU33 70 aa7.35□□□□□ -1.23
EMP1-211ENST00000544053 LCE2CQ5TA81 110 aa7.35□□□□□ -1.23
EMP1-211ENST00000544053 ROMO1P60602 79 aa7.34□□□□□ -1.23
EMP1-211ENST00000544053 H1FX-AS1Q4G0G2 97 aa7.31□□□□□ -1.24
EMP1-211ENST00000544053 KRTAP19-2Q3LHN2 52 aa7.29□□□□□ -1.24
EMP1-211ENST00000544053 H0YAA0 97 aa7.28□□□□□ -1.24
EMP1-211ENST00000544053 MT1HP80294 61 aa7.27□□□□□ -1.24
EMP1-211ENST00000544053 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
EMP1-211ENST00000544053 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
EMP1-211ENST00000544053 M0R2T5 61 aa7.22□□□□□ -1.25
EMP1-211ENST00000544053 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.25
EMP1-211ENST00000544053 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
EMP1-211ENST00000544053 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
EMP1-211ENST00000544053 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
EMP1-211ENST00000544053 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
EMP1-211ENST00000544053 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
EMP1-211ENST00000544053 USH2AO75445 5202 aa7□□□□□ -1.29
EMP1-211ENST00000544053 P0C880 135 aa6.97□□□□□ -1.29
EMP1-211ENST00000544053 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
EMP1-211ENST00000544053 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
EMP1-211ENST00000544053 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
EMP1-211ENST00000544053 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
EMP1-211ENST00000544053 KRTAP15-1Q3LI76 137 aa6.84□□□□□ -1.32
EMP1-211ENST00000544053 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
EMP1-211ENST00000544053 S4R3F8 94 aa6.76□□□□□ -1.33
EMP1-211ENST00000544053 KRTAP3-3Q9BYR6 98 aa6.76□□□□□ -1.33
EMP1-211ENST00000544053 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
EMP1-211ENST00000544053 MT2AP02795 61 aa6.75□□□□□ -1.33
EMP1-211ENST00000544053 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
EMP1-211ENST00000544053 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
EMP1-211ENST00000544053 KRTAP10-10P60014 251 aa6.71□□□□□ -1.34
EMP1-211ENST00000544053 A0A0D9SG42 100 aa6.7□□□□□ -1.34
EMP1-211ENST00000544053 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
EMP1-211ENST00000544053 M0QZ58 72 aa6.7□□□□□ -1.34
EMP1-211ENST00000544053 MT1FP04733 61 aa6.69□□□□□ -1.34
EMP1-211ENST00000544053 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
EMP1-211ENST00000544053 LCE2BO14633 110 aa6.65□□□□□ -1.35
EMP1-211ENST00000544053 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.35
EMP1-211ENST00000544053 KRTAP19-1Q8IUB9 90 aa6.63□□□□□ -1.35
EMP1-211ENST00000544053 KRTAP12-1P59990 96 aa6.6□□□□□ -1.35
EMP1-211ENST00000544053 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
EMP1-211ENST00000544053 SYNE2Q8WXH0 6885 aaKnown RBP6.58□□□□□ -1.36
EMP1-211ENST00000544053 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
EMP1-211ENST00000544053 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
EMP1-211ENST00000544053 KRTAP19-6Q3LI70 58 aa6.45□□□□□ -1.38
EMP1-211ENST00000544053 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
EMP1-211ENST00000544053 PLAC4Q8WY50 150 aa6.4□□□□□ -1.39
EMP1-211ENST00000544053 LUZP6Q538Z0 58 aa6.33□□□□□ -1.4
EMP1-211ENST00000544053 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
EMP1-211ENST00000544053 R4GN34 69 aa6.27□□□□□ -1.41
EMP1-211ENST00000544053 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
EMP1-211ENST00000544053 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
EMP1-211ENST00000544053 KRTAP23-1A1A580 65 aa6.19□□□□□ -1.42
EMP1-211ENST00000544053 NEBP20929 6669 aa6.19□□□□□ -1.42
EMP1-211ENST00000544053 MT1BP07438 61 aa6.08□□□□□ -1.44
EMP1-211ENST00000544053 MDN1Q9NU22 5596 aa6.08□□□□□ -1.44
EMP1-211ENST00000544053 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
EMP1-211ENST00000544053 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
EMP1-211ENST00000544053 KMT2DO14686 5537 aa6.01□□□□□ -1.45
EMP1-211ENST00000544053 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
EMP1-211ENST00000544053 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
EMP1-211ENST00000544053 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
EMP1-211ENST00000544053 TNP1P09430 55 aa5.93□□□□□ -1.46
EMP1-211ENST00000544053 KRTAP20-1Q3LI63 56 aa5.88□□□□□ -1.47
EMP1-211ENST00000544053 KRTAP5-9P26371 169 aa5.87□□□□□ -1.47
EMP1-211ENST00000544053 PRO2289Q9P1D8 64 aa5.76□□□□□ -1.49
EMP1-211ENST00000544053 INE1O15225 51 aa5.75□□□□□ -1.49
EMP1-211ENST00000544053 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
EMP1-211ENST00000544053 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
EMP1-211ENST00000544053 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
EMP1-211ENST00000544053 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms