RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 PRAC1Q96KF2 57 aa10.75□□□□□ -0.69
ME3-212ENST00000543262 COX6B2Q6YFQ2 88 aa10.73□□□□□ -0.69
ME3-212ENST00000543262 H3BS24 57 aa10.67□□□□□ -0.7
ME3-212ENST00000543262 LINC01554Q52M75 96 aa10.66□□□□□ -0.7
ME3-212ENST00000543262 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
ME3-212ENST00000543262 TPRXLQ17RH7 258 aa10.61□□□□□ -0.71
ME3-212ENST00000543262 ABCA13Q86UQ4 5058 aa10.56□□□□□ -0.72
ME3-212ENST00000543262 UQCR11O14957 56 aa10.54□□□□□ -0.72
ME3-212ENST00000543262 SPATA8Q6RVD6 105 aa10.51□□□□□ -0.73
ME3-212ENST00000543262 LRP2P98164 4655 aa10.49□□□□□ -0.73
ME3-212ENST00000543262 MIR22HGQ0VDD5 57 aa10.49□□□□□ -0.73
ME3-212ENST00000543262 LPAP08519 4548 aa10.46□□□□□ -0.74
ME3-212ENST00000543262 KRTAP3-3Q9BYR6 98 aa10.42□□□□□ -0.74
ME3-212ENST00000543262 J3QL48 77 aa10.4□□□□□ -0.74
ME3-212ENST00000543262 S4R3F8 94 aa10.37□□□□□ -0.75
ME3-212ENST00000543262 HERC2O95714 4834 aa10.35□□□□□ -0.75
ME3-212ENST00000543262 CSAG1Q6PB30 78 aa10.34□□□□□ -0.75
ME3-212ENST00000543262 A0A1B0GU33 70 aa10.33□□□□□ -0.76
ME3-212ENST00000543262 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
ME3-212ENST00000543262 BIRC6Q9NR09 4857 aa10.29□□□□□ -0.76
ME3-212ENST00000543262 H0YAA0 97 aa10.28□□□□□ -0.76
ME3-212ENST00000543262 SEC61BP60468 96 aaKnown RBP10.22□□□□□ -0.77
ME3-212ENST00000543262 KRTAP10-6P60371 365 aaPredicted RBP10.19□□□□□ -0.78
ME3-212ENST00000543262 KRTAP3-2Q9BYR7 98 aa10.17□□□□□ -0.78
ME3-212ENST00000543262 KRTAP4-1Q9BYQ7 146 aa10.08□□□□□ -0.8
ME3-212ENST00000543262 MUC17Q685J3 4493 aa10.07□□□□□ -0.8
ME3-212ENST00000543262 P0C880 135 aa10.05□□□□□ -0.8
ME3-212ENST00000543262 KRTAP13-4Q3LI77 160 aa10.01□□□□□ -0.81
ME3-212ENST00000543262 PCLOQ9Y6V0 5065 aa9.97□□□□□ -0.81
ME3-212ENST00000543262 ROMO1P60602 79 aa9.96□□□□□ -0.82
ME3-212ENST00000543262 KRTAP25-1Q3LHN0 102 aa9.96□□□□□ -0.82
ME3-212ENST00000543262 A0A0D9SG42 100 aa9.89□□□□□ -0.83
ME3-212ENST00000543262 K7ERS5 55 aa9.86□□□□□ -0.83
ME3-212ENST00000543262 KRTAP19-2Q3LHN2 52 aa9.86□□□□□ -0.83
ME3-212ENST00000543262 HERC1Q15751 4861 aa9.85□□□□□ -0.83
ME3-212ENST00000543262 HMCN2Q8NDA2 5059 aa9.76□□□□□ -0.85
ME3-212ENST00000543262 MUC2Q02817 5179 aa9.76□□□□□ -0.85
ME3-212ENST00000543262 M0QZ58 72 aa9.73□□□□□ -0.85
ME3-212ENST00000543262 KRTAP12-2P59991 146 aa9.65□□□□□ -0.86
ME3-212ENST00000543262 CRIPTQ9P021 101 aa9.65□□□□□ -0.87
ME3-212ENST00000543262 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
ME3-212ENST00000543262 R4GN34 69 aa9.6□□□□□ -0.87
ME3-212ENST00000543262 SPINT4Q6UDR6 99 aa9.59□□□□□ -0.87
ME3-212ENST00000543262 LORP23490 312 aaPredicted RBP9.58□□□□□ -0.88
ME3-212ENST00000543262 FLGP20930 4061 aaPredicted RBP9.58□□□□□ -0.88
ME3-212ENST00000543262 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
ME3-212ENST00000543262 UBR4Q5T4S7 5183 aa9.34□□□□□ -0.91
ME3-212ENST00000543262 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
ME3-212ENST00000543262 NDUFAF8A1L188 74 aa9.33□□□□□ -0.92
ME3-212ENST00000543262 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
ME3-212ENST00000543262 KRTAP15-1Q3LI76 137 aa9.22□□□□□ -0.93
ME3-212ENST00000543262 MT1HP80294 61 aa9.2□□□□□ -0.94
ME3-212ENST00000543262 C10orf95Q9H7T3 257 aa9.2□□□□□ -0.94
ME3-212ENST00000543262 M0R2T5 61 aa9.19□□□□□ -0.94
ME3-212ENST00000543262 CAMK2N1Q7Z7J9 78 aa9.05□□□□□ -0.96
ME3-212ENST00000543262 A0A0A0MQY5 61 aa9.04□□□□□ -0.96
ME3-212ENST00000543262 SPRR2GQ9BYE4 73 aa8.99□□□□□ -0.97
ME3-212ENST00000543262 MT2AP02795 61 aa8.96□□□□□ -0.97
ME3-212ENST00000543262 KRTAP19-1Q8IUB9 90 aa8.96□□□□□ -0.97
ME3-212ENST00000543262 KRTAP9-8Q9BYQ0 159 aa8.94□□□□□ -0.98
ME3-212ENST00000543262 MT1FP04733 61 aa8.94□□□□□ -0.98
ME3-212ENST00000543262 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
ME3-212ENST00000543262 PLAC4Q8WY50 150 aa8.81□□□□□ -1
ME3-212ENST00000543262 LUZP6Q538Z0 58 aa8.75□□□□□ -1.01
ME3-212ENST00000543262 TNP1P09430 55 aa8.66□□□□□ -1.02
ME3-212ENST00000543262 KRTAP19-8Q3LI54 63 aa8.66□□□□□ -1.02
ME3-212ENST00000543262 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
ME3-212ENST00000543262 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
ME3-212ENST00000543262 MT1BP07438 61 aa8.55□□□□□ -1.04
ME3-212ENST00000543262 KRTAP23-1A1A580 65 aa8.47□□□□□ -1.05
ME3-212ENST00000543262 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.05
ME3-212ENST00000543262 KRTAP10-5P60370 271 aa8.4□□□□□ -1.06
ME3-212ENST00000543262 MT1XP80297 61 aa8.4□□□□□ -1.07
ME3-212ENST00000543262 LCE2BO14633 110 aa8.3□□□□□ -1.08
ME3-212ENST00000543262 LCE3AQ5TA76 89 aa8.26□□□□□ -1.09
ME3-212ENST00000543262 PRO2289Q9P1D8 64 aa8.17□□□□□ -1.1
ME3-212ENST00000543262 KRTAP10-7P60409 375 aaPredicted RBP8.12□□□□□ -1.11
ME3-212ENST00000543262 KRTAP10-12P60413 245 aa8.09□□□□□ -1.11
ME3-212ENST00000543262 KRTAP8-1Q8IUC2 63 aa8.07□□□□□ -1.12
ME3-212ENST00000543262 USH2AO75445 5202 aa8.06□□□□□ -1.12
ME3-212ENST00000543262 KRTAP12-3P60328 96 aa7.9□□□□□ -1.14
ME3-212ENST00000543262 SPRR5A0A1B0GTR4 108 aa7.89□□□□□ -1.15
ME3-212ENST00000543262 KRTAP19-5Q3LI72 72 aa7.72□□□□□ -1.17
ME3-212ENST00000543262 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
ME3-212ENST00000543262 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
ME3-212ENST00000543262 KMT2DO14686 5537 aa7.71□□□□□ -1.18
ME3-212ENST00000543262 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
ME3-212ENST00000543262 KRTAP19-6Q3LI70 58 aa7.6□□□□□ -1.19
ME3-212ENST00000543262 FSIP2Q5CZC0 6907 aa7.52□□□□□ -1.21
ME3-212ENST00000543262 KRTAP19-7Q3SYF9 63 aa7.49□□□□□ -1.21
ME3-212ENST00000543262 LCE2DQ5TA82 110 aaPredicted RBP7.45□□□□□ -1.22
ME3-212ENST00000543262 INE1O15225 51 aa7.43□□□□□ -1.22
ME3-212ENST00000543262 LCE3CQ5T5A8 94 aa7.42□□□□□ -1.22
ME3-212ENST00000543262 MT1EP04732 61 aa7.3□□□□□ -1.24
ME3-212ENST00000543262 FCGBPQ9Y6R7 5405 aaPredicted RBP7.24□□□□□ -1.25
ME3-212ENST00000543262 MT1LQ93083 61 aa7.23□□□□□ -1.25
ME3-212ENST00000543262 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
ME3-212ENST00000543262 KRTAP19-4Q3LI73 84 aa7.16□□□□□ -1.26
ME3-212ENST00000543262 KRTAP9-6A8MVA2 160 aa7.1□□□□□ -1.27
ME3-212ENST00000543262 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms