RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ATP5EP56381 51 aaPredicted RBP5.31□□□□□ -1.56
DDB1-221ENST00000543162 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
DDB1-221ENST00000543162 V9GYY9 64 aa5.27□□□□□ -1.57
DDB1-221ENST00000543162 S4R3F8 94 aa5.26□□□□□ -1.57
DDB1-221ENST00000543162 CHKB-CPT1BH3BT56 60 aa5.23□□□□□ -1.57
DDB1-221ENST00000543162 LCA10Q71F78 164 aa5.23□□□□□ -1.57
DDB1-221ENST00000543162 COA5Q86WW8 74 aa5.23□□□□□ -1.57
DDB1-221ENST00000543162 MT1HP80294 61 aa5.2□□□□□ -1.58
DDB1-221ENST00000543162 M0R2T5 61 aa5.18□□□□□ -1.58
DDB1-221ENST00000543162 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
DDB1-221ENST00000543162 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
DDB1-221ENST00000543162 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
DDB1-221ENST00000543162 SPTSSBQ8NFR3 76 aa5.17□□□□□ -1.58
DDB1-221ENST00000543162 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
DDB1-221ENST00000543162 PRO0628Q9UI54 55 aa5.11□□□□□ -1.59
DDB1-221ENST00000543162 LCE2AQ5TA79 106 aaPredicted RBP5.1□□□□□ -1.59
DDB1-221ENST00000543162 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
DDB1-221ENST00000543162 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
DDB1-221ENST00000543162 SMIM26A0A096LP01 95 aa5.02□□□□□ -1.61
DDB1-221ENST00000543162 H0YAA0 97 aa5.02□□□□□ -1.61
DDB1-221ENST00000543162 H3BS24 57 aa5.02□□□□□ -1.61
DDB1-221ENST00000543162 LORP23490 312 aaPredicted RBP5.01□□□□□ -1.61
DDB1-221ENST00000543162 ADM2Q7Z4H4 148 aa5□□□□□ -1.61
DDB1-221ENST00000543162 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
DDB1-221ENST00000543162 MT2AP02795 61 aa4.97□□□□□ -1.61
DDB1-221ENST00000543162 LINC01558Q9Y6Z2 57 aa4.97□□□□□ -1.61
DDB1-221ENST00000543162 A0A1B0GU69 56 aa4.96□□□□□ -1.62
DDB1-221ENST00000543162 P0C880 135 aa4.94□□□□□ -1.62
DDB1-221ENST00000543162 KRTAP10-10P60014 251 aa4.94□□□□□ -1.62
DDB1-221ENST00000543162 Q1T7F1 81 aa4.94□□□□□ -1.62
DDB1-221ENST00000543162 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
DDB1-221ENST00000543162 MT1FP04733 61 aa4.93□□□□□ -1.62
DDB1-221ENST00000543162 PSPHP1O15172 72 aa4.88□□□□□ -1.63
DDB1-221ENST00000543162 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
DDB1-221ENST00000543162 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
DDB1-221ENST00000543162 A0A1B0GU33 70 aa4.86□□□□□ -1.63
DDB1-221ENST00000543162 PMAIP1Q13794 54 aa4.86□□□□□ -1.63
DDB1-221ENST00000543162 R4GN34 69 aa4.85□□□□□ -1.63
DDB1-221ENST00000543162 M0QZ58 72 aa4.83□□□□□ -1.64
DDB1-221ENST00000543162 Q5VV11 94 aa4.81□□□□□ -1.64
DDB1-221ENST00000543162 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
DDB1-221ENST00000543162 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
DDB1-221ENST00000543162 UQCR11O14957 56 aa4.78□□□□□ -1.64
DDB1-221ENST00000543162 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
DDB1-221ENST00000543162 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
DDB1-221ENST00000543162 SPATA8Q6RVD6 105 aa4.77□□□□□ -1.65
DDB1-221ENST00000543162 LINC01554Q52M75 96 aa4.75□□□□□ -1.65
DDB1-221ENST00000543162 A6NED7 52 aa4.74□□□□□ -1.65
DDB1-221ENST00000543162 A0A0D9SG42 100 aa4.71□□□□□ -1.66
DDB1-221ENST00000543162 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
DDB1-221ENST00000543162 LCE2BO14633 110 aa4.7□□□□□ -1.66
DDB1-221ENST00000543162 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
DDB1-221ENST00000543162 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
DDB1-221ENST00000543162 A8MU10 97 aa4.68□□□□□ -1.66
DDB1-221ENST00000543162 A6NN06 94 aa4.65□□□□□ -1.67
DDB1-221ENST00000543162 MT1BP07438 61 aa4.63□□□□□ -1.67
DDB1-221ENST00000543162 PLAC4Q8WY50 150 aa4.62□□□□□ -1.67
DDB1-221ENST00000543162 SPINT4Q6UDR6 99 aa4.61□□□□□ -1.67
DDB1-221ENST00000543162 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
DDB1-221ENST00000543162 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
DDB1-221ENST00000543162 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
DDB1-221ENST00000543162 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
DDB1-221ENST00000543162 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
DDB1-221ENST00000543162 K7ERS5 55 aa4.55□□□□□ -1.68
DDB1-221ENST00000543162 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
DDB1-221ENST00000543162 USH2AO75445 5202 aa4.53□□□□□ -1.68
DDB1-221ENST00000543162 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
DDB1-221ENST00000543162 PRO2289Q9P1D8 64 aa4.45□□□□□ -1.7
DDB1-221ENST00000543162 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
DDB1-221ENST00000543162 MT1XP80297 61 aa4.44□□□□□ -1.7
DDB1-221ENST00000543162 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
DDB1-221ENST00000543162 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
DDB1-221ENST00000543162 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
DDB1-221ENST00000543162 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
DDB1-221ENST00000543162 ROMO1P60602 79 aa4.32□□□□□ -1.72
DDB1-221ENST00000543162 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
DDB1-221ENST00000543162 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
DDB1-221ENST00000543162 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
DDB1-221ENST00000543162 TNP1P09430 55 aa4.28□□□□□ -1.72
DDB1-221ENST00000543162 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
DDB1-221ENST00000543162 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
DDB1-221ENST00000543162 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
DDB1-221ENST00000543162 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
DDB1-221ENST00000543162 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
DDB1-221ENST00000543162 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
DDB1-221ENST00000543162 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
DDB1-221ENST00000543162 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
DDB1-221ENST00000543162 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.75
DDB1-221ENST00000543162 KRTAP8-1Q8IUC2 63 aa4.08□□□□□ -1.76
DDB1-221ENST00000543162 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
DDB1-221ENST00000543162 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
DDB1-221ENST00000543162 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
DDB1-221ENST00000543162 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
DDB1-221ENST00000543162 KMT2DO14686 5537 aa4.02□□□□□ -1.77
DDB1-221ENST00000543162 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
DDB1-221ENST00000543162 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
DDB1-221ENST00000543162 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
DDB1-221ENST00000543162 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
DDB1-221ENST00000543162 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
DDB1-221ENST00000543162 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms