RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 FAT3Q8TDW7 4589 aa8.82□□□□□ -1
KDM2B-216ENST00000543025 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
KDM2B-216ENST00000543025 ABCA13Q86UQ4 5058 aa8.8□□□□□ -1
KDM2B-216ENST00000543025 MYCBP2O75592 4640 aa8.79□□□□□ -1
KDM2B-216ENST00000543025 A0A1B0GU33 70 aa8.79□□□□□ -1
KDM2B-216ENST00000543025 COX6B2Q6YFQ2 88 aa8.76□□□□□ -1.01
KDM2B-216ENST00000543025 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
KDM2B-216ENST00000543025 TNXBP22105 4242 aa8.75□□□□□ -1.01
KDM2B-216ENST00000543025 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
KDM2B-216ENST00000543025 KRTAP10-8P60410 259 aa8.73□□□□□ -1.01
KDM2B-216ENST00000543025 CSAG1Q6PB30 78 aa8.73□□□□□ -1.01
KDM2B-216ENST00000543025 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
KDM2B-216ENST00000543025 PCLOQ9Y6V0 5065 aa8.61□□□□□ -1.03
KDM2B-216ENST00000543025 RPL37P61927 97 aaKnown RBP8.57□□□□□ -1.04
KDM2B-216ENST00000543025 J3QL48 77 aa8.56□□□□□ -1.04
KDM2B-216ENST00000543025 K7ERS5 55 aa8.56□□□□□ -1.04
KDM2B-216ENST00000543025 DMBT1Q9UGM3 2413 aaPredicted RBP8.54□□□□□ -1.04
KDM2B-216ENST00000543025 KRTAP3-3Q9BYR6 98 aa8.52□□□□□ -1.04
KDM2B-216ENST00000543025 KRTAP25-1Q3LHN0 102 aa8.5□□□□□ -1.05
KDM2B-216ENST00000543025 XP32Q5T750 250 aa8.5□□□□□ -1.05
KDM2B-216ENST00000543025 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
KDM2B-216ENST00000543025 S4R3F8 94 aa8.45□□□□□ -1.06
KDM2B-216ENST00000543025 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
KDM2B-216ENST00000543025 KRTAP13-4Q3LI77 160 aa8.39□□□□□ -1.07
KDM2B-216ENST00000543025 ROMO1P60602 79 aa8.35□□□□□ -1.07
KDM2B-216ENST00000543025 A0A0D9SG42 100 aa8.34□□□□□ -1.07
KDM2B-216ENST00000543025 HERC1Q15751 4861 aa8.33□□□□□ -1.08
KDM2B-216ENST00000543025 CRIPTQ9P021 101 aa8.31□□□□□ -1.08
KDM2B-216ENST00000543025 P0C880 135 aa8.3□□□□□ -1.08
KDM2B-216ENST00000543025 LPAP08519 4548 aa8.23□□□□□ -1.09
KDM2B-216ENST00000543025 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
KDM2B-216ENST00000543025 HMCN2Q8NDA2 5059 aa8.18□□□□□ -1.1
KDM2B-216ENST00000543025 KRTAP12-2P59991 146 aa8.14□□□□□ -1.11
KDM2B-216ENST00000543025 LRP2P98164 4655 aa8.11□□□□□ -1.11
KDM2B-216ENST00000543025 KRTAP12-1P59990 96 aa8.08□□□□□ -1.12
KDM2B-216ENST00000543025 M0QZ58 72 aa8.07□□□□□ -1.12
KDM2B-216ENST00000543025 SPINT4Q6UDR6 99 aa8.06□□□□□ -1.12
KDM2B-216ENST00000543025 H3BS24 57 aa8.04□□□□□ -1.12
KDM2B-216ENST00000543025 C10orf95Q9H7T3 257 aa8.03□□□□□ -1.12
KDM2B-216ENST00000543025 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
KDM2B-216ENST00000543025 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
KDM2B-216ENST00000543025 R4GN34 69 aa7.86□□□□□ -1.15
KDM2B-216ENST00000543025 UBR4Q5T4S7 5183 aa7.85□□□□□ -1.15
KDM2B-216ENST00000543025 KRTAP4-1Q9BYQ7 146 aa7.82□□□□□ -1.16
KDM2B-216ENST00000543025 KRTAP15-1Q3LI76 137 aa7.76□□□□□ -1.17
KDM2B-216ENST00000543025 MUC2Q02817 5179 aa7.74□□□□□ -1.17
KDM2B-216ENST00000543025 RNF213Q63HN8 5207 aa7.73□□□□□ -1.17
KDM2B-216ENST00000543025 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
KDM2B-216ENST00000543025 KRTAP19-2Q3LHN2 52 aa7.6□□□□□ -1.19
KDM2B-216ENST00000543025 NDUFAF8A1L188 74 aa7.57□□□□□ -1.2
KDM2B-216ENST00000543025 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
KDM2B-216ENST00000543025 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.22
KDM2B-216ENST00000543025 FAT4Q6V0I7 4981 aa7.45□□□□□ -1.22
KDM2B-216ENST00000543025 PLAC4Q8WY50 150 aa7.41□□□□□ -1.22
KDM2B-216ENST00000543025 FLGP20930 4061 aaPredicted RBP7.4□□□□□ -1.22
KDM2B-216ENST00000543025 PP632Q6XCG6 107 aa7.4□□□□□ -1.23
KDM2B-216ENST00000543025 MT1HP80294 61 aa7.35□□□□□ -1.23
KDM2B-216ENST00000543025 M0R2T5 61 aa7.24□□□□□ -1.25
KDM2B-216ENST00000543025 LCE2AQ5TA79 106 aaPredicted RBP7.23□□□□□ -1.25
KDM2B-216ENST00000543025 TNP1P09430 55 aa7.2□□□□□ -1.26
KDM2B-216ENST00000543025 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.27
KDM2B-216ENST00000543025 LUZP6Q538Z0 58 aa7.1□□□□□ -1.27
KDM2B-216ENST00000543025 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
KDM2B-216ENST00000543025 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
KDM2B-216ENST00000543025 KRTAP19-1Q8IUB9 90 aa7□□□□□ -1.29
KDM2B-216ENST00000543025 MT2AP02795 61 aa7□□□□□ -1.29
KDM2B-216ENST00000543025 MT1FP04733 61 aa6.96□□□□□ -1.3
KDM2B-216ENST00000543025 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
KDM2B-216ENST00000543025 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
KDM2B-216ENST00000543025 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.3
KDM2B-216ENST00000543025 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
KDM2B-216ENST00000543025 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
KDM2B-216ENST00000543025 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
KDM2B-216ENST00000543025 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
KDM2B-216ENST00000543025 LCE2BO14633 110 aa6.65□□□□□ -1.34
KDM2B-216ENST00000543025 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
KDM2B-216ENST00000543025 MT1BP07438 61 aa6.63□□□□□ -1.35
KDM2B-216ENST00000543025 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
KDM2B-216ENST00000543025 MT1XP80297 61 aa6.6□□□□□ -1.35
KDM2B-216ENST00000543025 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
KDM2B-216ENST00000543025 USH2AO75445 5202 aa6.53□□□□□ -1.36
KDM2B-216ENST00000543025 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
KDM2B-216ENST00000543025 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
KDM2B-216ENST00000543025 KRTAP10-7P60409 375 aaPredicted RBP6.42□□□□□ -1.38
KDM2B-216ENST00000543025 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
KDM2B-216ENST00000543025 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
KDM2B-216ENST00000543025 SSPOA2VEC9 5147 aa6.36□□□□□ -1.39
KDM2B-216ENST00000543025 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
KDM2B-216ENST00000543025 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
KDM2B-216ENST00000543025 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
KDM2B-216ENST00000543025 INE1O15225 51 aa6.14□□□□□ -1.43
KDM2B-216ENST00000543025 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
KDM2B-216ENST00000543025 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
KDM2B-216ENST00000543025 KMT2DO14686 5537 aa6.1□□□□□ -1.43
KDM2B-216ENST00000543025 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
KDM2B-216ENST00000543025 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
KDM2B-216ENST00000543025 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
KDM2B-216ENST00000543025 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
KDM2B-216ENST00000543025 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
KDM2B-216ENST00000543025 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms