RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 MT2AP02795 61 aa9.88□□□□□ -0.83
OTUB1-211ENST00000543004 CSAG1Q6PB30 78 aa9.85□□□□□ -0.83
OTUB1-211ENST00000543004 SPANXA2-OT1Q8N9U9 137 aa9.85□□□□□ -0.83
OTUB1-211ENST00000543004 H7BZZ5 65 aa9.84□□□□□ -0.83
OTUB1-211ENST00000543004 MT1FP04733 61 aa9.82□□□□□ -0.84
OTUB1-211ENST00000543004 NDUFC1O43677 76 aa9.8□□□□□ -0.84
OTUB1-211ENST00000543004 ACYP2P14621 99 aa9.8□□□□□ -0.84
OTUB1-211ENST00000543004 KRTAP10-10P60014 251 aa9.74□□□□□ -0.85
OTUB1-211ENST00000543004 LCE2DQ5TA82 110 aaPredicted RBP9.64□□□□□ -0.87
OTUB1-211ENST00000543004 KRTAP9-2Q9BYQ4 174 aa9.64□□□□□ -0.87
OTUB1-211ENST00000543004 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
OTUB1-211ENST00000543004 KRTAP9-3Q9BYQ3 159 aa9.62□□□□□ -0.87
OTUB1-211ENST00000543004 SVIPQ8NHG7 77 aa9.6□□□□□ -0.87
OTUB1-211ENST00000543004 COA5Q86WW8 74 aa9.6□□□□□ -0.87
OTUB1-211ENST00000543004 H0YAA0 97 aa9.53□□□□□ -0.88
OTUB1-211ENST00000543004 ADM2Q7Z4H4 148 aa9.53□□□□□ -0.88
OTUB1-211ENST00000543004 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
OTUB1-211ENST00000543004 LCE2BO14633 110 aa9.48□□□□□ -0.89
OTUB1-211ENST00000543004 FSIP2Q5CZC0 6907 aa9.45□□□□□ -0.9
OTUB1-211ENST00000543004 TMEM258P61165 79 aa9.45□□□□□ -0.9
OTUB1-211ENST00000543004 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
OTUB1-211ENST00000543004 P0C880 135 aa9.44□□□□□ -0.9
OTUB1-211ENST00000543004 PCP4P48539 62 aa9.44□□□□□ -0.9
OTUB1-211ENST00000543004 ATP5EP56381 51 aaPredicted RBP9.44□□□□□ -0.9
OTUB1-211ENST00000543004 USH2AO75445 5202 aa9.43□□□□□ -0.9
OTUB1-211ENST00000543004 KRTAP19-1Q8IUB9 90 aa9.42□□□□□ -0.9
OTUB1-211ENST00000543004 SPRR2GQ9BYE4 73 aa9.33□□□□□ -0.92
OTUB1-211ENST00000543004 CRIPTQ9P021 101 aa9.31□□□□□ -0.92
OTUB1-211ENST00000543004 SSPOA2VEC9 5147 aa9.25□□□□□ -0.93
OTUB1-211ENST00000543004 R4GN34 69 aa9.21□□□□□ -0.93
OTUB1-211ENST00000543004 M0QZ58 72 aa9.19□□□□□ -0.94
OTUB1-211ENST00000543004 CRCT1Q9UGL9 99 aa9.19□□□□□ -0.94
OTUB1-211ENST00000543004 KRTAP19-8Q3LI54 63 aa9.18□□□□□ -0.94
OTUB1-211ENST00000543004 SERP1Q9Y6X1 66 aa9.16□□□□□ -0.94
OTUB1-211ENST00000543004 MT1BP07438 61 aa9.16□□□□□ -0.94
OTUB1-211ENST00000543004 SEC61GP60059 68 aa9.13□□□□□ -0.95
OTUB1-211ENST00000543004 Q5VV11 94 aa9.12□□□□□ -0.95
OTUB1-211ENST00000543004 KRTAP9-6A0A140TA67 174 aa9.1□□□□□ -0.95
OTUB1-211ENST00000543004 A0A1B0GU69 56 aa9.07□□□□□ -0.96
OTUB1-211ENST00000543004 KRTAP13-4Q3LI77 160 aa9.07□□□□□ -0.96
OTUB1-211ENST00000543004 LINC01554Q52M75 96 aa9.06□□□□□ -0.96
OTUB1-211ENST00000543004 LINC01558Q9Y6Z2 57 aa9.01□□□□□ -0.97
OTUB1-211ENST00000543004 A0A1B0GU33 70 aa8.98□□□□□ -0.97
OTUB1-211ENST00000543004 KRTAP19-6Q3LI70 58 aa8.98□□□□□ -0.97
OTUB1-211ENST00000543004 SPATA8Q6RVD6 105 aa8.94□□□□□ -0.98
OTUB1-211ENST00000543004 FCGBPQ9Y6R7 5405 aaPredicted RBP8.92□□□□□ -0.98
OTUB1-211ENST00000543004 PRR15LQ9BU68 103 aa8.9□□□□□ -0.99
OTUB1-211ENST00000543004 PLAC4Q8WY50 150 aa8.87□□□□□ -0.99
OTUB1-211ENST00000543004 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
OTUB1-211ENST00000543004 SMIM26A0A096LP01 95 aa8.83□□□□□ -1
OTUB1-211ENST00000543004 A0A0D9SG42 100 aa8.83□□□□□ -1
OTUB1-211ENST00000543004 Q1T7F1 81 aa8.81□□□□□ -1
OTUB1-211ENST00000543004 A6NN06 94 aa8.78□□□□□ -1
OTUB1-211ENST00000543004 KRTAP10-5P60370 271 aa8.78□□□□□ -1
OTUB1-211ENST00000543004 PSPHP1O15172 72 aa8.77□□□□□ -1.01
OTUB1-211ENST00000543004 V9GYY9 64 aa8.77□□□□□ -1.01
OTUB1-211ENST00000543004 A8MU10 97 aa8.74□□□□□ -1.01
OTUB1-211ENST00000543004 MT1XP80297 61 aa8.72□□□□□ -1.01
OTUB1-211ENST00000543004 UQCR11O14957 56 aa8.66□□□□□ -1.02
OTUB1-211ENST00000543004 KRTAP12-1P59990 96 aa8.65□□□□□ -1.03
OTUB1-211ENST00000543004 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
OTUB1-211ENST00000543004 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
OTUB1-211ENST00000543004 PRO2289Q9P1D8 64 aa8.6□□□□□ -1.03
OTUB1-211ENST00000543004 MACF1Q9UPN3 7388 aaKnown RBP8.56□□□□□ -1.04
OTUB1-211ENST00000543004 CAMK2N1Q7Z7J9 78 aa8.55□□□□□ -1.04
OTUB1-211ENST00000543004 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.54□□□□□ -1.04
OTUB1-211ENST00000543004 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
OTUB1-211ENST00000543004 A6NED7 52 aa8.45□□□□□ -1.06
OTUB1-211ENST00000543004 SYNE2Q8WXH0 6885 aaKnown RBP8.41□□□□□ -1.06
OTUB1-211ENST00000543004 KRTAP10-7P60409 375 aaPredicted RBP8.37□□□□□ -1.07
OTUB1-211ENST00000543004 KMT2DO14686 5537 aa8.36□□□□□ -1.07
OTUB1-211ENST00000543004 KRTAP9-7A8MTY7 169 aa8.25□□□□□ -1.09
OTUB1-211ENST00000543004 KRTAP10-12P60413 245 aa8.25□□□□□ -1.09
OTUB1-211ENST00000543004 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
OTUB1-211ENST00000543004 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
OTUB1-211ENST00000543004 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
OTUB1-211ENST00000543004 CDC42SE1Q9NRR8 79 aa8.19□□□□□ -1.1
OTUB1-211ENST00000543004 K7ERS5 55 aa8.18□□□□□ -1.1
OTUB1-211ENST00000543004 KRTAP6-3Q3LI67 103 aa8.13□□□□□ -1.11
OTUB1-211ENST00000543004 KRTAP8-1Q8IUC2 63 aa8.08□□□□□ -1.12
OTUB1-211ENST00000543004 TNP1P09430 55 aa8.01□□□□□ -1.13
OTUB1-211ENST00000543004 KRTAP5-9P26371 169 aa8.01□□□□□ -1.13
OTUB1-211ENST00000543004 MUC12Q9UKN1 5478 aa7.97□□□□□ -1.13
OTUB1-211ENST00000543004 SPRR2FQ96RM1 72 aa7.95□□□□□ -1.14
OTUB1-211ENST00000543004 BRK1Q8WUW1 75 aa7.94□□□□□ -1.14
OTUB1-211ENST00000543004 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
OTUB1-211ENST00000543004 MDN1Q9NU22 5596 aa7.84□□□□□ -1.15
OTUB1-211ENST00000543004 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
OTUB1-211ENST00000543004 ROMO1P60602 79 aa7.81□□□□□ -1.16
OTUB1-211ENST00000543004 KRTAP19-7Q3SYF9 63 aa7.8□□□□□ -1.16
OTUB1-211ENST00000543004 KRTAP19-5Q3LI72 72 aa7.75□□□□□ -1.17
OTUB1-211ENST00000543004 NEBP20929 6669 aa7.74□□□□□ -1.17
OTUB1-211ENST00000543004 MT1EP04732 61 aa7.68□□□□□ -1.18
OTUB1-211ENST00000543004 SPRR2EP22531 72 aa7.68□□□□□ -1.18
OTUB1-211ENST00000543004 SPRR2BP35325 72 aa7.68□□□□□ -1.18
OTUB1-211ENST00000543004 SPRR2AP35326 72 aa7.68□□□□□ -1.18
OTUB1-211ENST00000543004 LCE1AQ5T7P2 110 aa7.67□□□□□ -1.18
OTUB1-211ENST00000543004 KRTAP12-3P60328 96 aa7.53□□□□□ -1.2
OTUB1-211ENST00000543004 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.2
OTUB1-211ENST00000543004 KRTAP19-3Q7Z4W3 81 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms