RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 SPATA8Q6RVD6 105 aa7.13□□□□□ -1.27
SLC3A2-220ENST00000542922 MIR22HGQ0VDD5 57 aa7.13□□□□□ -1.27
SLC3A2-220ENST00000542922 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
SLC3A2-220ENST00000542922 UQCR11O14957 56 aa7.12□□□□□ -1.27
SLC3A2-220ENST00000542922 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
SLC3A2-220ENST00000542922 SEC61GP60059 68 aa7.06□□□□□ -1.28
SLC3A2-220ENST00000542922 LPAP08519 4548 aa7.03□□□□□ -1.28
SLC3A2-220ENST00000542922 KRTAP4-5Q9BYR2 181 aa7.03□□□□□ -1.28
SLC3A2-220ENST00000542922 H0YAA0 97 aa7.01□□□□□ -1.29
SLC3A2-220ENST00000542922 LRP2P98164 4655 aa7.01□□□□□ -1.29
SLC3A2-220ENST00000542922 ABCA13Q86UQ4 5058 aa6.99□□□□□ -1.29
SLC3A2-220ENST00000542922 A0A1B0GU33 70 aa6.96□□□□□ -1.3
SLC3A2-220ENST00000542922 H1FX-AS1Q4G0G2 97 aa6.95□□□□□ -1.3
SLC3A2-220ENST00000542922 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
SLC3A2-220ENST00000542922 PRAC1Q96KF2 57 aa6.92□□□□□ -1.3
SLC3A2-220ENST00000542922 TPRXLQ17RH7 258 aa6.89□□□□□ -1.31
SLC3A2-220ENST00000542922 S4R3F8 94 aa6.89□□□□□ -1.31
SLC3A2-220ENST00000542922 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
SLC3A2-220ENST00000542922 KRTAP10-6P60371 365 aaPredicted RBP6.87□□□□□ -1.31
SLC3A2-220ENST00000542922 LCE2BO14633 110 aa6.85□□□□□ -1.31
SLC3A2-220ENST00000542922 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
SLC3A2-220ENST00000542922 P0C880 135 aa6.78□□□□□ -1.32
SLC3A2-220ENST00000542922 HERC2O95714 4834 aa6.75□□□□□ -1.33
SLC3A2-220ENST00000542922 A0A0D9SG42 100 aa6.71□□□□□ -1.33
SLC3A2-220ENST00000542922 MUC17Q685J3 4493 aa6.71□□□□□ -1.34
SLC3A2-220ENST00000542922 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
SLC3A2-220ENST00000542922 J3QL48 77 aa6.69□□□□□ -1.34
SLC3A2-220ENST00000542922 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
SLC3A2-220ENST00000542922 BIRC6Q9NR09 4857 aa6.67□□□□□ -1.34
SLC3A2-220ENST00000542922 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
SLC3A2-220ENST00000542922 K7ERS5 55 aa6.61□□□□□ -1.35
SLC3A2-220ENST00000542922 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
SLC3A2-220ENST00000542922 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
SLC3A2-220ENST00000542922 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
SLC3A2-220ENST00000542922 LINC01554Q52M75 96 aa6.52□□□□□ -1.36
SLC3A2-220ENST00000542922 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
SLC3A2-220ENST00000542922 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
SLC3A2-220ENST00000542922 MUC2Q02817 5179 aa6.51□□□□□ -1.37
SLC3A2-220ENST00000542922 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
SLC3A2-220ENST00000542922 ROMO1P60602 79 aa6.5□□□□□ -1.37
SLC3A2-220ENST00000542922 PCLOQ9Y6V0 5065 aa6.47□□□□□ -1.37
SLC3A2-220ENST00000542922 SPINT4Q6UDR6 99 aa6.47□□□□□ -1.37
SLC3A2-220ENST00000542922 HERC1Q15751 4861 aa6.46□□□□□ -1.38
SLC3A2-220ENST00000542922 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
SLC3A2-220ENST00000542922 M0QZ58 72 aa6.45□□□□□ -1.38
SLC3A2-220ENST00000542922 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
SLC3A2-220ENST00000542922 R4GN34 69 aa6.37□□□□□ -1.39
SLC3A2-220ENST00000542922 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
SLC3A2-220ENST00000542922 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
SLC3A2-220ENST00000542922 FLGP20930 4061 aaPredicted RBP6.31□□□□□ -1.4
SLC3A2-220ENST00000542922 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
SLC3A2-220ENST00000542922 UBR4Q5T4S7 5183 aa6.15□□□□□ -1.43
SLC3A2-220ENST00000542922 RNF213Q63HN8 5207 aa6.12□□□□□ -1.43
SLC3A2-220ENST00000542922 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
SLC3A2-220ENST00000542922 H3BS24 57 aa6.03□□□□□ -1.44
SLC3A2-220ENST00000542922 MT1HP80294 61 aa6.01□□□□□ -1.45
SLC3A2-220ENST00000542922 M0R2T5 61 aa5.98□□□□□ -1.45
SLC3A2-220ENST00000542922 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
SLC3A2-220ENST00000542922 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
SLC3A2-220ENST00000542922 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
SLC3A2-220ENST00000542922 KRTAP4-6Q9BYQ5 205 aa5.91□□□□□ -1.46
SLC3A2-220ENST00000542922 SPRR2GQ9BYE4 73 aa5.9□□□□□ -1.46
SLC3A2-220ENST00000542922 MT1FP04733 61 aa5.9□□□□□ -1.47
SLC3A2-220ENST00000542922 MT2AP02795 61 aa5.89□□□□□ -1.47
SLC3A2-220ENST00000542922 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
SLC3A2-220ENST00000542922 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
SLC3A2-220ENST00000542922 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
SLC3A2-220ENST00000542922 TNP1P09430 55 aa5.76□□□□□ -1.49
SLC3A2-220ENST00000542922 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
SLC3A2-220ENST00000542922 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
SLC3A2-220ENST00000542922 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
SLC3A2-220ENST00000542922 MT1BP07438 61 aa5.66□□□□□ -1.5
SLC3A2-220ENST00000542922 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
SLC3A2-220ENST00000542922 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
SLC3A2-220ENST00000542922 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
SLC3A2-220ENST00000542922 MT1XP80297 61 aa5.57□□□□□ -1.52
SLC3A2-220ENST00000542922 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
SLC3A2-220ENST00000542922 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
SLC3A2-220ENST00000542922 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
SLC3A2-220ENST00000542922 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
SLC3A2-220ENST00000542922 USH2AO75445 5202 aa5.41□□□□□ -1.54
SLC3A2-220ENST00000542922 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
SLC3A2-220ENST00000542922 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
SLC3A2-220ENST00000542922 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
SLC3A2-220ENST00000542922 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
SLC3A2-220ENST00000542922 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
SLC3A2-220ENST00000542922 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
SLC3A2-220ENST00000542922 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
SLC3A2-220ENST00000542922 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
SLC3A2-220ENST00000542922 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
SLC3A2-220ENST00000542922 KMT2DO14686 5537 aa5.24□□□□□ -1.57
SLC3A2-220ENST00000542922 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
SLC3A2-220ENST00000542922 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
SLC3A2-220ENST00000542922 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
SLC3A2-220ENST00000542922 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
SLC3A2-220ENST00000542922 SSPOA2VEC9 5147 aa5.04□□□□□ -1.6
SLC3A2-220ENST00000542922 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
SLC3A2-220ENST00000542922 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
SLC3A2-220ENST00000542922 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
SLC3A2-220ENST00000542922 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms