RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 K7ERS5 55 aa3.52□□□□□ -1.85
PTPRO-208ENST00000542557 ADM2Q7Z4H4 148 aa3.52□□□□□ -1.85
PTPRO-208ENST00000542557 Q8N1X5 172 aa3.52□□□□□ -1.85
PTPRO-208ENST00000542557 HSPG2P98160 4391 aa3.52□□□□□ -1.85
PTPRO-208ENST00000542557 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
PTPRO-208ENST00000542557 FLG2Q5D862 2391 aaPredicted RBP3.51□□□□□ -1.85
PTPRO-208ENST00000542557 UQCR11O14957 56 aa3.5□□□□□ -1.85
PTPRO-208ENST00000542557 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
PTPRO-208ENST00000542557 RYR1P21817 5038 aa3.5□□□□□ -1.85
PTPRO-208ENST00000542557 LRP1Q07954 4544 aaKnown RBP3.5□□□□□ -1.85
PTPRO-208ENST00000542557 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
PTPRO-208ENST00000542557 Q5VSD8 79 aa3.48□□□□□ -1.85
PTPRO-208ENST00000542557 RYR3Q15413 4870 aa3.48□□□□□ -1.85
PTPRO-208ENST00000542557 ROMO1P60602 79 aa3.48□□□□□ -1.85
PTPRO-208ENST00000542557 KRTAP3-1Q9BYR8 98 aa3.48□□□□□ -1.85
PTPRO-208ENST00000542557 COX6B2Q6YFQ2 88 aa3.46□□□□□ -1.86
PTPRO-208ENST00000542557 XP32Q5T750 250 aa3.44□□□□□ -1.86
PTPRO-208ENST00000542557 RPL37P61927 97 aaKnown RBP3.44□□□□□ -1.86
PTPRO-208ENST00000542557 KIAA1109Q2LD37 5005 aa3.4□□□□□ -1.86
PTPRO-208ENST00000542557 MYCBP2O75592 4640 aa3.4□□□□□ -1.87
PTPRO-208ENST00000542557 MT1HL1P0DM35 61 aa3.39□□□□□ -1.87
PTPRO-208ENST00000542557 H0YAA0 97 aa3.39□□□□□ -1.87
PTPRO-208ENST00000542557 A0A1B0GU33 70 aa3.38□□□□□ -1.87
PTPRO-208ENST00000542557 H1FX-AS1Q4G0G2 97 aa3.38□□□□□ -1.87
PTPRO-208ENST00000542557 KRTAP17-1Q9BYP8 105 aa3.38□□□□□ -1.87
PTPRO-208ENST00000542557 KRTAP4-8Q9BYQ9 185 aa3.37□□□□□ -1.87
PTPRO-208ENST00000542557 DMBT1Q9UGM3 2413 aaPredicted RBP3.35□□□□□ -1.87
PTPRO-208ENST00000542557 EPPK1P58107 5090 aaKnown RBP3.34□□□□□ -1.88
PTPRO-208ENST00000542557 TPRXLQ17RH7 258 aa3.33□□□□□ -1.88
PTPRO-208ENST00000542557 S4R3F8 94 aa3.33□□□□□ -1.88
PTPRO-208ENST00000542557 P0C880 135 aa3.32□□□□□ -1.88
PTPRO-208ENST00000542557 KRTAP10-6P60371 365 aaPredicted RBP3.3□□□□□ -1.88
PTPRO-208ENST00000542557 LRP2P98164 4655 aa3.29□□□□□ -1.88
PTPRO-208ENST00000542557 LPAP08519 4548 aa3.28□□□□□ -1.88
PTPRO-208ENST00000542557 CSAG1Q6PB30 78 aa3.25□□□□□ -1.89
PTPRO-208ENST00000542557 KRTAP13-4Q3LI77 160 aa3.24□□□□□ -1.89
PTPRO-208ENST00000542557 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
PTPRO-208ENST00000542557 KRTAP9-2Q9BYQ4 174 aa3.24□□□□□ -1.89
PTPRO-208ENST00000542557 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
PTPRO-208ENST00000542557 KRTAP9-6A0A140TA67 174 aa3.23□□□□□ -1.89
PTPRO-208ENST00000542557 KRTAP4-5Q9BYR2 181 aa3.22□□□□□ -1.89
PTPRO-208ENST00000542557 MUC17Q685J3 4493 aa3.21□□□□□ -1.9
PTPRO-208ENST00000542557 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
PTPRO-208ENST00000542557 KRTAP4-8A0A0G2JLE6 195 aa3.2□□□□□ -1.9
PTPRO-208ENST00000542557 A0A0D9SG42 100 aa3.18□□□□□ -1.9
PTPRO-208ENST00000542557 HERC2O95714 4834 aa3.18□□□□□ -1.9
PTPRO-208ENST00000542557 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
PTPRO-208ENST00000542557 M0QZ58 72 aa3.17□□□□□ -1.9
PTPRO-208ENST00000542557 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.91
PTPRO-208ENST00000542557 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
PTPRO-208ENST00000542557 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
PTPRO-208ENST00000542557 KRTAP4-7Q9BYR0 210 aa3.14□□□□□ -1.91
PTPRO-208ENST00000542557 BIRC6Q9NR09 4857 aa3.14□□□□□ -1.91
PTPRO-208ENST00000542557 KRTAP12-1P59990 96 aa3.13□□□□□ -1.91
PTPRO-208ENST00000542557 LCE4AQ5TA78 99 aa3.13□□□□□ -1.91
PTPRO-208ENST00000542557 KRTAP4-1Q9BYQ7 146 aa3.11□□□□□ -1.91
PTPRO-208ENST00000542557 KRTAP15-1Q3LI76 137 aa3.09□□□□□ -1.91
PTPRO-208ENST00000542557 SPINT4Q6UDR6 99 aa3.09□□□□□ -1.91
PTPRO-208ENST00000542557 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
PTPRO-208ENST00000542557 KRTAP19-2Q3LHN2 52 aa3.09□□□□□ -1.91
PTPRO-208ENST00000542557 CRIPTQ9P021 101 aa3.09□□□□□ -1.91
PTPRO-208ENST00000542557 PRO2289Q9P1D8 64 aa3.08□□□□□ -1.92
PTPRO-208ENST00000542557 R4GN34 69 aa3.07□□□□□ -1.92
PTPRO-208ENST00000542557 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
PTPRO-208ENST00000542557 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
PTPRO-208ENST00000542557 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
PTPRO-208ENST00000542557 HERC1Q15751 4861 aa3.02□□□□□ -1.93
PTPRO-208ENST00000542557 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
PTPRO-208ENST00000542557 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
PTPRO-208ENST00000542557 PCLOQ9Y6V0 5065 aa2.99□□□□□ -1.93
PTPRO-208ENST00000542557 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
PTPRO-208ENST00000542557 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
PTPRO-208ENST00000542557 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
PTPRO-208ENST00000542557 MUC2Q02817 5179 aa2.97□□□□□ -1.93
PTPRO-208ENST00000542557 KRTAP9-8Q9BYQ0 159 aa2.96□□□□□ -1.94
PTPRO-208ENST00000542557 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
PTPRO-208ENST00000542557 KRTAP9-7A8MTY7 169 aa2.95□□□□□ -1.94
PTPRO-208ENST00000542557 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
PTPRO-208ENST00000542557 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
PTPRO-208ENST00000542557 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
PTPRO-208ENST00000542557 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
PTPRO-208ENST00000542557 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
PTPRO-208ENST00000542557 MT1HP80294 61 aa2.83□□□□□ -1.96
PTPRO-208ENST00000542557 INE1O15225 51 aa2.83□□□□□ -1.96
PTPRO-208ENST00000542557 UBR4Q5T4S7 5183 aa2.81□□□□□ -1.96
PTPRO-208ENST00000542557 TNP1P09430 55 aa2.81□□□□□ -1.96
PTPRO-208ENST00000542557 M0R2T5 61 aa2.8□□□□□ -1.96
PTPRO-208ENST00000542557 PLAC4Q8WY50 150 aa2.8□□□□□ -1.96
PTPRO-208ENST00000542557 MT2AP02795 61 aa2.78□□□□□ -1.96
PTPRO-208ENST00000542557 MT1FP04733 61 aa2.77□□□□□ -1.97
PTPRO-208ENST00000542557 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
PTPRO-208ENST00000542557 KRTAP9-3Q9BYQ3 159 aa2.75□□□□□ -1.97
PTPRO-208ENST00000542557 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
PTPRO-208ENST00000542557 KRTAP19-8Q3LI54 63 aa2.74□□□□□ -1.97
PTPRO-208ENST00000542557 LCE5AQ5TCM9 118 aa2.69□□□□□ -1.98
PTPRO-208ENST00000542557 MT1BP07438 61 aa2.68□□□□□ -1.98
PTPRO-208ENST00000542557 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
PTPRO-208ENST00000542557 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
PTPRO-208ENST00000542557 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
PTPRO-208ENST00000542557 MT1XP80297 61 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms