RNA–Protein interactions for RNA: ENST00000541196.2

HCP5-204, Transcript of HLA complex P5, humanhuman

TSL 1 (best)

Gene HCP5, Length 2,432 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCP5-204ENST00000541196 RYR3Q15413 4870 aa5.33□□□□□ -1.56
HCP5-204ENST00000541196 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
HCP5-204ENST00000541196 LRP1BQ9NZR2 4599 aa5.31□□□□□ -1.56
HCP5-204ENST00000541196 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
HCP5-204ENST00000541196 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
HCP5-204ENST00000541196 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
HCP5-204ENST00000541196 Q5VSD8 79 aa5.27□□□□□ -1.57
HCP5-204ENST00000541196 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
HCP5-204ENST00000541196 KRTAP10-4P60372 401 aaPredicted RBP5.25□□□□□ -1.57
HCP5-204ENST00000541196 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
HCP5-204ENST00000541196 KRTAP1-4P0C5Y4 121 aa5.24□□□□□ -1.57
HCP5-204ENST00000541196 APOBP04114 4563 aaKnown RBP5.22□□□□□ -1.57
HCP5-204ENST00000541196 DMBT1Q9UGM3 2413 aaPredicted RBP5.2□□□□□ -1.58
HCP5-204ENST00000541196 A0A0D9SG42 100 aa5.19□□□□□ -1.58
HCP5-204ENST00000541196 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
HCP5-204ENST00000541196 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
HCP5-204ENST00000541196 FAT1Q14517 4588 aa5.15□□□□□ -1.59
HCP5-204ENST00000541196 EPPK1P58107 5090 aaKnown RBP5.15□□□□□ -1.59
HCP5-204ENST00000541196 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.59
HCP5-204ENST00000541196 HSPG2P98160 4391 aa5.13□□□□□ -1.59
HCP5-204ENST00000541196 RYR1P21817 5038 aa5.11□□□□□ -1.59
HCP5-204ENST00000541196 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
HCP5-204ENST00000541196 RPS29P62273 56 aaKnown RBP5.11□□□□□ -1.59
HCP5-204ENST00000541196 KIAA1109Q2LD37 5005 aa5.11□□□□□ -1.59
HCP5-204ENST00000541196 S4R3F8 94 aa5.11□□□□□ -1.59
HCP5-204ENST00000541196 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
HCP5-204ENST00000541196 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
HCP5-204ENST00000541196 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
HCP5-204ENST00000541196 PKHD1L1Q86WI1 4243 aa5.05□□□□□ -1.6
HCP5-204ENST00000541196 XP32Q5T750 250 aa5.04□□□□□ -1.6
HCP5-204ENST00000541196 MT1HL1P0DM35 61 aa5□□□□□ -1.61
HCP5-204ENST00000541196 LRP1Q07954 4544 aaKnown RBP4.99□□□□□ -1.61
HCP5-204ENST00000541196 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
HCP5-204ENST00000541196 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.62
HCP5-204ENST00000541196 MYCBP2O75592 4640 aa4.93□□□□□ -1.62
HCP5-204ENST00000541196 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
HCP5-204ENST00000541196 TNXBP22105 4242 aa4.92□□□□□ -1.62
HCP5-204ENST00000541196 PLAC4Q8WY50 150 aa4.92□□□□□ -1.62
HCP5-204ENST00000541196 HERC2O95714 4834 aa4.88□□□□□ -1.63
HCP5-204ENST00000541196 M0QZ58 72 aa4.86□□□□□ -1.63
HCP5-204ENST00000541196 CAMK2N1Q7Z7J9 78 aa4.86□□□□□ -1.63
HCP5-204ENST00000541196 ABCA13Q86UQ4 5058 aa4.84□□□□□ -1.63
HCP5-204ENST00000541196 LCE2BO14633 110 aa4.83□□□□□ -1.64
HCP5-204ENST00000541196 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
HCP5-204ENST00000541196 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
HCP5-204ENST00000541196 LPAP08519 4548 aa4.65□□□□□ -1.66
HCP5-204ENST00000541196 R4GN34 69 aa4.64□□□□□ -1.67
HCP5-204ENST00000541196 LRP2P98164 4655 aa4.61□□□□□ -1.67
HCP5-204ENST00000541196 HERC1Q15751 4861 aa4.59□□□□□ -1.67
HCP5-204ENST00000541196 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
HCP5-204ENST00000541196 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
HCP5-204ENST00000541196 KRTAP4-1Q9BYQ7 146 aa4.51□□□□□ -1.69
HCP5-204ENST00000541196 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
HCP5-204ENST00000541196 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
HCP5-204ENST00000541196 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
HCP5-204ENST00000541196 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
HCP5-204ENST00000541196 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
HCP5-204ENST00000541196 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
HCP5-204ENST00000541196 MUC2Q02817 5179 aa4.36□□□□□ -1.71
HCP5-204ENST00000541196 TNP1P09430 55 aa4.35□□□□□ -1.71
HCP5-204ENST00000541196 INE1O15225 51 aa4.34□□□□□ -1.72
HCP5-204ENST00000541196 KRTAP19-2Q3LHN2 52 aa4.34□□□□□ -1.72
HCP5-204ENST00000541196 UBR4Q5T4S7 5183 aa4.31□□□□□ -1.72
HCP5-204ENST00000541196 M0R2T5 61 aa4.28□□□□□ -1.72
HCP5-204ENST00000541196 RNF213Q63HN8 5207 aa4.27□□□□□ -1.73
HCP5-204ENST00000541196 MT1HP80294 61 aa4.23□□□□□ -1.73
HCP5-204ENST00000541196 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
HCP5-204ENST00000541196 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
HCP5-204ENST00000541196 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
HCP5-204ENST00000541196 FAT4Q6V0I7 4981 aa4.14□□□□□ -1.75
HCP5-204ENST00000541196 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
HCP5-204ENST00000541196 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
HCP5-204ENST00000541196 MT2AP02795 61 aa4.04□□□□□ -1.76
HCP5-204ENST00000541196 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
HCP5-204ENST00000541196 MT1FP04733 61 aa4.02□□□□□ -1.77
HCP5-204ENST00000541196 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
HCP5-204ENST00000541196 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
HCP5-204ENST00000541196 KRTAP19-1Q8IUB9 90 aa3.92□□□□□ -1.78
HCP5-204ENST00000541196 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
HCP5-204ENST00000541196 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
HCP5-204ENST00000541196 KRTAP12-3P60328 96 aa3.84□□□□□ -1.8
HCP5-204ENST00000541196 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.8
HCP5-204ENST00000541196 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
HCP5-204ENST00000541196 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
HCP5-204ENST00000541196 MT1BP07438 61 aa3.78□□□□□ -1.8
HCP5-204ENST00000541196 KRTAP9-2Q9BYQ4 174 aa3.78□□□□□ -1.8
HCP5-204ENST00000541196 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
HCP5-204ENST00000541196 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
HCP5-204ENST00000541196 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
HCP5-204ENST00000541196 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
HCP5-204ENST00000541196 MT1XP80297 61 aa3.65□□□□□ -1.82
HCP5-204ENST00000541196 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
HCP5-204ENST00000541196 USH2AO75445 5202 aa3.62□□□□□ -1.83
HCP5-204ENST00000541196 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
HCP5-204ENST00000541196 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
HCP5-204ENST00000541196 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
HCP5-204ENST00000541196 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.83
HCP5-204ENST00000541196 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.84
HCP5-204ENST00000541196 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
HCP5-204ENST00000541196 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms