RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 FAT1Q14517 4588 aa5.55□□□□□ -1.52
LMO3-224ENST00000540848 A8MUN3 132 aa5.55□□□□□ -1.52
LMO3-224ENST00000540848 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
LMO3-224ENST00000540848 KMT2CQ8NEZ4 4911 aaKnown RBP5.53□□□□□ -1.52
LMO3-224ENST00000540848 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
LMO3-224ENST00000540848 FLG2Q5D862 2391 aaPredicted RBP5.52□□□□□ -1.53
LMO3-224ENST00000540848 PSPHP1O15172 72 aa5.52□□□□□ -1.53
LMO3-224ENST00000540848 Q75L30 129 aa5.52□□□□□ -1.53
LMO3-224ENST00000540848 C9orf92A6NGG3 77 aa5.5□□□□□ -1.53
LMO3-224ENST00000540848 Q5VV11 94 aa5.5□□□□□ -1.53
LMO3-224ENST00000540848 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
LMO3-224ENST00000540848 PRR15LQ9BU68 103 aa5.5□□□□□ -1.53
LMO3-224ENST00000540848 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
LMO3-224ENST00000540848 HSPG2P98160 4391 aa5.45□□□□□ -1.54
LMO3-224ENST00000540848 SPTSSBQ8NFR3 76 aa5.43□□□□□ -1.54
LMO3-224ENST00000540848 TNXBP22105 4242 aa5.42□□□□□ -1.54
LMO3-224ENST00000540848 SPINK7P58062 85 aa5.42□□□□□ -1.54
LMO3-224ENST00000540848 ATP11AUNQ6ZP68 121 aa5.42□□□□□ -1.54
LMO3-224ENST00000540848 A6NED7 52 aa5.4□□□□□ -1.55
LMO3-224ENST00000540848 MT1HL1P0DM35 61 aa5.39□□□□□ -1.55
LMO3-224ENST00000540848 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
LMO3-224ENST00000540848 RPL37P61927 97 aaKnown RBP5.39□□□□□ -1.55
LMO3-224ENST00000540848 A0A1B0GU69 56 aa5.38□□□□□ -1.55
LMO3-224ENST00000540848 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
LMO3-224ENST00000540848 RYR1P21817 5038 aa5.37□□□□□ -1.55
LMO3-224ENST00000540848 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
LMO3-224ENST00000540848 KRTAP5-11Q6L8G4 156 aa5.37□□□□□ -1.55
LMO3-224ENST00000540848 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
LMO3-224ENST00000540848 RYR3Q15413 4870 aa5.36□□□□□ -1.55
LMO3-224ENST00000540848 COX6B2Q6YFQ2 88 aa5.35□□□□□ -1.55
LMO3-224ENST00000540848 FAT3Q8TDW7 4589 aa5.34□□□□□ -1.55
LMO3-224ENST00000540848 LRP1Q07954 4544 aaKnown RBP5.33□□□□□ -1.56
LMO3-224ENST00000540848 SEC61GP60059 68 aa5.32□□□□□ -1.56
LMO3-224ENST00000540848 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
LMO3-224ENST00000540848 LCA10Q71F78 164 aa5.3□□□□□ -1.56
LMO3-224ENST00000540848 UQCR11O14957 56 aa5.28□□□□□ -1.56
LMO3-224ENST00000540848 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
LMO3-224ENST00000540848 SPATA8Q6RVD6 105 aa5.25□□□□□ -1.57
LMO3-224ENST00000540848 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
LMO3-224ENST00000540848 A8MU10 97 aa5.21□□□□□ -1.57
LMO3-224ENST00000540848 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.57
LMO3-224ENST00000540848 MYCBP2O75592 4640 aa5.19□□□□□ -1.58
LMO3-224ENST00000540848 EPPK1P58107 5090 aaKnown RBP5.19□□□□□ -1.58
LMO3-224ENST00000540848 A6NN06 94 aa5.16□□□□□ -1.58
LMO3-224ENST00000540848 S4R3F8 94 aa5.16□□□□□ -1.58
LMO3-224ENST00000540848 H1FX-AS1Q4G0G2 97 aa5.15□□□□□ -1.59
LMO3-224ENST00000540848 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.59
LMO3-224ENST00000540848 A0A1B0GU33 70 aa5.13□□□□□ -1.59
LMO3-224ENST00000540848 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
LMO3-224ENST00000540848 BIRC6Q9NR09 4857 aa5.13□□□□□ -1.59
LMO3-224ENST00000540848 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
LMO3-224ENST00000540848 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
LMO3-224ENST00000540848 H0YAA0 97 aa5.05□□□□□ -1.6
LMO3-224ENST00000540848 CSAG1Q6PB30 78 aa5.04□□□□□ -1.6
LMO3-224ENST00000540848 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
LMO3-224ENST00000540848 K7ERS5 55 aa5□□□□□ -1.61
LMO3-224ENST00000540848 LRP2P98164 4655 aa4.98□□□□□ -1.61
LMO3-224ENST00000540848 HERC2O95714 4834 aa4.96□□□□□ -1.61
LMO3-224ENST00000540848 ADM2Q7Z4H4 148 aa4.93□□□□□ -1.62
LMO3-224ENST00000540848 ABCA13Q86UQ4 5058 aa4.92□□□□□ -1.62
LMO3-224ENST00000540848 M0QZ58 72 aa4.91□□□□□ -1.62
LMO3-224ENST00000540848 LPAP08519 4548 aa4.91□□□□□ -1.62
LMO3-224ENST00000540848 P0C880 135 aa4.91□□□□□ -1.62
LMO3-224ENST00000540848 MT3P25713 68 aa4.89□□□□□ -1.63
LMO3-224ENST00000540848 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
LMO3-224ENST00000540848 KRTAP13-4Q3LI77 160 aa4.87□□□□□ -1.63
LMO3-224ENST00000540848 KRTAP4-1Q9BYQ7 146 aa4.87□□□□□ -1.63
LMO3-224ENST00000540848 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
LMO3-224ENST00000540848 PCLOQ9Y6V0 5065 aa4.84□□□□□ -1.63
LMO3-224ENST00000540848 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
LMO3-224ENST00000540848 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
LMO3-224ENST00000540848 A0A0D9SG42 100 aa4.82□□□□□ -1.64
LMO3-224ENST00000540848 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
LMO3-224ENST00000540848 ROMO1P60602 79 aa4.78□□□□□ -1.64
LMO3-224ENST00000540848 R4GN34 69 aa4.77□□□□□ -1.65
LMO3-224ENST00000540848 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
LMO3-224ENST00000540848 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
LMO3-224ENST00000540848 KRTAP12-2P59991 146 aa4.72□□□□□ -1.65
LMO3-224ENST00000540848 KRTAP4-4Q9BYR3 166 aa4.72□□□□□ -1.65
LMO3-224ENST00000540848 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
LMO3-224ENST00000540848 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
LMO3-224ENST00000540848 SPINT4Q6UDR6 99 aa4.7□□□□□ -1.66
LMO3-224ENST00000540848 CRIPTQ9P021 101 aa4.7□□□□□ -1.66
LMO3-224ENST00000540848 LINC01554Q52M75 96 aa4.68□□□□□ -1.66
LMO3-224ENST00000540848 HMCN2Q8NDA2 5059 aa4.65□□□□□ -1.67
LMO3-224ENST00000540848 HERC1Q15751 4861 aa4.64□□□□□ -1.67
LMO3-224ENST00000540848 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
LMO3-224ENST00000540848 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
LMO3-224ENST00000540848 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
LMO3-224ENST00000540848 A0A0A0MQY5 61 aa4.53□□□□□ -1.69
LMO3-224ENST00000540848 MUC2Q02817 5179 aa4.52□□□□□ -1.69
LMO3-224ENST00000540848 M0R2T5 61 aa4.52□□□□□ -1.69
LMO3-224ENST00000540848 MT1HP80294 61 aa4.51□□□□□ -1.69
LMO3-224ENST00000540848 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
LMO3-224ENST00000540848 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
LMO3-224ENST00000540848 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
LMO3-224ENST00000540848 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
LMO3-224ENST00000540848 PLAC4Q8WY50 150 aa4.4□□□□□ -1.7
LMO3-224ENST00000540848 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
LMO3-224ENST00000540848 MT2AP02795 61 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms