RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
TTC3-225ENST00000540756 PSPHP1O15172 72 aa12.18□□□□□ -0.46
TTC3-225ENST00000540756 RNF213Q63HN8 5207 aa12.17□□□□□ -0.46
TTC3-225ENST00000540756 KRTAP19-2Q3LHN2 52 aa12.16□□□□□ -0.46
TTC3-225ENST00000540756 S4R3F8 94 aa12.16□□□□□ -0.46
TTC3-225ENST00000540756 LINC01558Q9Y6Z2 57 aa12.14□□□□□ -0.47
TTC3-225ENST00000540756 V9GYY9 64 aa12.11□□□□□ -0.47
TTC3-225ENST00000540756 PRR15LQ9BU68 103 aa12.1□□□□□ -0.47
TTC3-225ENST00000540756 SPTSSBQ8NFR3 76 aa12.07□□□□□ -0.48
TTC3-225ENST00000540756 Q5VV11 94 aa12.01□□□□□ -0.49
TTC3-225ENST00000540756 FAT4Q6V0I7 4981 aa11.98□□□□□ -0.49
TTC3-225ENST00000540756 A0A1B0GU69 56 aa11.96□□□□□ -0.49
TTC3-225ENST00000540756 FLGP20930 4061 aaPredicted RBP11.96□□□□□ -0.5
TTC3-225ENST00000540756 LCE2CQ5TA81 110 aa11.87□□□□□ -0.51
TTC3-225ENST00000540756 CSAG1Q6PB30 78 aa11.86□□□□□ -0.51
TTC3-225ENST00000540756 SEC61GP60059 68 aa11.81□□□□□ -0.52
TTC3-225ENST00000540756 KRTAP3-2Q9BYR7 98 aa11.76□□□□□ -0.53
TTC3-225ENST00000540756 KRTAP10-6P60371 365 aaPredicted RBP11.74□□□□□ -0.53
TTC3-225ENST00000540756 A6NED7 52 aa11.72□□□□□ -0.53
TTC3-225ENST00000540756 P0C880 135 aa11.68□□□□□ -0.54
TTC3-225ENST00000540756 ADM2Q7Z4H4 148 aa11.68□□□□□ -0.54
TTC3-225ENST00000540756 A8MU10 97 aa11.67□□□□□ -0.54
TTC3-225ENST00000540756 BRK1Q8WUW1 75 aa11.65□□□□□ -0.54
TTC3-225ENST00000540756 MT1HP80294 61 aa11.6□□□□□ -0.55
TTC3-225ENST00000540756 A0A1B0GU33 70 aa11.6□□□□□ -0.55
TTC3-225ENST00000540756 UQCR11O14957 56 aa11.57□□□□□ -0.56
TTC3-225ENST00000540756 H0YAA0 97 aa11.54□□□□□ -0.56
TTC3-225ENST00000540756 SPATA8Q6RVD6 105 aa11.52□□□□□ -0.57
TTC3-225ENST00000540756 MIR22HGQ0VDD5 57 aa11.48□□□□□ -0.57
TTC3-225ENST00000540756 KRTAP13-4Q3LI77 160 aa11.48□□□□□ -0.57
TTC3-225ENST00000540756 M0R2T5 61 aa11.47□□□□□ -0.57
TTC3-225ENST00000540756 CDC42SE1Q9NRR8 79 aa11.47□□□□□ -0.57
TTC3-225ENST00000540756 LORP23490 312 aaPredicted RBP11.42□□□□□ -0.58
TTC3-225ENST00000540756 PRO0628Q9UI54 55 aa11.32□□□□□ -0.6
TTC3-225ENST00000540756 A0A0D9SG42 100 aa11.25□□□□□ -0.61
TTC3-225ENST00000540756 M0QZ58 72 aa11.23□□□□□ -0.61
TTC3-225ENST00000540756 R4GN34 69 aa11.21□□□□□ -0.61
TTC3-225ENST00000540756 KRTAP9-8Q9BYQ0 159 aa11.19□□□□□ -0.62
TTC3-225ENST00000540756 MT2AP02795 61 aa11.15□□□□□ -0.62
TTC3-225ENST00000540756 MT1FP04733 61 aa11.12□□□□□ -0.63
TTC3-225ENST00000540756 LINC01554Q52M75 96 aa11.12□□□□□ -0.63
TTC3-225ENST00000540756 LCE2AQ5TA79 106 aaPredicted RBP11.09□□□□□ -0.63
TTC3-225ENST00000540756 KRTAP10-10P60014 251 aa11.04□□□□□ -0.64
TTC3-225ENST00000540756 KRTAP12-2P59991 146 aa10.99□□□□□ -0.65
TTC3-225ENST00000540756 CRIPTQ9P021 101 aa10.99□□□□□ -0.65
TTC3-225ENST00000540756 PMAIP1Q13794 54 aa10.98□□□□□ -0.65
TTC3-225ENST00000540756 KRTAP12-1P59990 96 aa10.97□□□□□ -0.65
TTC3-225ENST00000540756 SPINT4Q6UDR6 99 aa10.94□□□□□ -0.66
TTC3-225ENST00000540756 A6NN06 94 aa10.92□□□□□ -0.66
TTC3-225ENST00000540756 KRTAP19-1Q8IUB9 90 aa10.92□□□□□ -0.66
TTC3-225ENST00000540756 SPRR2GQ9BYE4 73 aa10.87□□□□□ -0.67
TTC3-225ENST00000540756 K7ERS5 55 aa10.84□□□□□ -0.67
TTC3-225ENST00000540756 KRTAP9-3Q9BYQ3 159 aa10.77□□□□□ -0.69
TTC3-225ENST00000540756 KRTAP19-8Q3LI54 63 aa10.57□□□□□ -0.72
TTC3-225ENST00000540756 LCE2BO14633 110 aa10.51□□□□□ -0.73
TTC3-225ENST00000540756 MT1BP07438 61 aa10.51□□□□□ -0.73
TTC3-225ENST00000540756 CAMK2N1Q7Z7J9 78 aa10.51□□□□□ -0.73
TTC3-225ENST00000540756 ROMO1P60602 79 aa10.49□□□□□ -0.73
TTC3-225ENST00000540756 PLAC4Q8WY50 150 aa10.49□□□□□ -0.73
TTC3-225ENST00000540756 KTN1-AS1Q86SY8 53 aa10.48□□□□□ -0.73
TTC3-225ENST00000540756 C10orf95Q9H7T3 257 aa10.41□□□□□ -0.74
TTC3-225ENST00000540756 USH2AO75445 5202 aa10.41□□□□□ -0.74
TTC3-225ENST00000540756 PRAC1Q96KF2 57 aa10.4□□□□□ -0.74
TTC3-225ENST00000540756 SVIPQ8NHG7 77 aa10.36□□□□□ -0.75
TTC3-225ENST00000540756 MT1XP80297 61 aa10.19□□□□□ -0.78
TTC3-225ENST00000540756 FSIP2Q5CZC0 6907 aa10.17□□□□□ -0.78
TTC3-225ENST00000540756 KRTAP10-5P60370 271 aa10.17□□□□□ -0.78
TTC3-225ENST00000540756 SSPOA2VEC9 5147 aa10.05□□□□□ -0.8
TTC3-225ENST00000540756 KRTAP25-1Q3LHN0 102 aa10.03□□□□□ -0.8
TTC3-225ENST00000540756 TNP1P09430 55 aa9.97□□□□□ -0.81
TTC3-225ENST00000540756 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
TTC3-225ENST00000540756 PRO2289Q9P1D8 64 aa9.91□□□□□ -0.82
TTC3-225ENST00000540756 KRTAP10-7P60409 375 aaPredicted RBP9.83□□□□□ -0.84
TTC3-225ENST00000540756 KRTAP19-6Q3LI70 58 aa9.75□□□□□ -0.85
TTC3-225ENST00000540756 KMT2DO14686 5537 aa9.68□□□□□ -0.86
TTC3-225ENST00000540756 KRTAP9-2Q9BYQ4 174 aa9.66□□□□□ -0.86
TTC3-225ENST00000540756 LCE3AQ5TA76 89 aa9.66□□□□□ -0.86
TTC3-225ENST00000540756 KRTAP10-12P60413 245 aa9.62□□□□□ -0.87
TTC3-225ENST00000540756 PP632Q6XCG6 107 aa9.6□□□□□ -0.87
TTC3-225ENST00000540756 FCGBPQ9Y6R7 5405 aaPredicted RBP9.57□□□□□ -0.88
TTC3-225ENST00000540756 KRTAP23-1A1A580 65 aa9.56□□□□□ -0.88
TTC3-225ENST00000540756 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
TTC3-225ENST00000540756 KRTAP4-8Q9BYQ9 185 aa9.49□□□□□ -0.89
TTC3-225ENST00000540756 KRTAP8-1Q8IUC2 63 aa9.37□□□□□ -0.91
TTC3-225ENST00000540756 CRCT1Q9UGL9 99 aa9.31□□□□□ -0.92
TTC3-225ENST00000540756 KRTAP19-5Q3LI72 72 aa9.22□□□□□ -0.93
TTC3-225ENST00000540756 KRTAP12-3P60328 96 aa9.22□□□□□ -0.93
TTC3-225ENST00000540756 MACF1Q9UPN3 7388 aaKnown RBP9.21□□□□□ -0.94
TTC3-225ENST00000540756 KRTAP19-7Q3SYF9 63 aa9.09□□□□□ -0.95
TTC3-225ENST00000540756 SYNE2Q8WXH0 6885 aaKnown RBP9.03□□□□□ -0.96
TTC3-225ENST00000540756 KRTAP15-1Q3LI76 137 aa9.02□□□□□ -0.97
TTC3-225ENST00000540756 MT1EP04732 61 aa8.9□□□□□ -0.99
TTC3-225ENST00000540756 MUC12Q9UKN1 5478 aa8.89□□□□□ -0.99
TTC3-225ENST00000540756 KRTAP9-6A0A140TA67 174 aa8.84□□□□□ -0.99
TTC3-225ENST00000540756 SPRR2FQ96RM1 72 aa8.73□□□□□ -1.01
TTC3-225ENST00000540756 MT1LQ93083 61 aa8.73□□□□□ -1.01
TTC3-225ENST00000540756 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
TTC3-225ENST00000540756 LCE3CQ5T5A8 94 aa8.62□□□□□ -1.03
TTC3-225ENST00000540756 SPRR5A0A1B0GTR4 108 aa8.61□□□□□ -1.03
TTC3-225ENST00000540756 KRTAP4-7Q9BYR0 210 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms