RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 LCA10Q71F78 164 aa4.28□□□□□ -1.72
PXN-209ENST00000540221 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
PXN-209ENST00000540221 MT-ATP8P03928 68 aa4.27□□□□□ -1.73
PXN-209ENST00000540221 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
PXN-209ENST00000540221 NDUFC1O43677 76 aa4.24□□□□□ -1.73
PXN-209ENST00000540221 FAM236AA0A1B0GUQ0 79 aa4.23□□□□□ -1.73
PXN-209ENST00000540221 FAM236BA0A1B0GV22 79 aa4.23□□□□□ -1.73
PXN-209ENST00000540221 KLKP1Q107X0 134 aa4.23□□□□□ -1.73
PXN-209ENST00000540221 H0YAA0 97 aa4.18□□□□□ -1.74
PXN-209ENST00000540221 DMAC1Q96GE9 116 aa4.18□□□□□ -1.74
PXN-209ENST00000540221 USH2AO75445 5202 aa4.18□□□□□ -1.74
PXN-209ENST00000540221 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
PXN-209ENST00000540221 SERP2Q8N6R1 65 aa4.14□□□□□ -1.75
PXN-209ENST00000540221 ACYP2P14621 99 aa4.13□□□□□ -1.75
PXN-209ENST00000540221 SPRR2GQ9BYE4 73 aa4.13□□□□□ -1.75
PXN-209ENST00000540221 KRTAP19-1Q8IUB9 90 aa4.11□□□□□ -1.75
PXN-209ENST00000540221 C20orf197Q8N268 126 aa4.1□□□□□ -1.75
PXN-209ENST00000540221 SPTSSBQ8NFR3 76 aa4.1□□□□□ -1.75
PXN-209ENST00000540221 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
PXN-209ENST00000540221 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
PXN-209ENST00000540221 SPANXA2-OT1Q8N9U9 137 aa4.09□□□□□ -1.75
PXN-209ENST00000540221 Q5VV11 94 aa4.08□□□□□ -1.76
PXN-209ENST00000540221 SNURFQ9Y675 71 aa4.08□□□□□ -1.76
PXN-209ENST00000540221 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
PXN-209ENST00000540221 ADM2Q7Z4H4 148 aa4.07□□□□□ -1.76
PXN-209ENST00000540221 CHKB-CPT1BH3BT56 60 aa4.05□□□□□ -1.76
PXN-209ENST00000540221 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
PXN-209ENST00000540221 COX7CP15954 63 aa4.03□□□□□ -1.76
PXN-209ENST00000540221 MT1BP07438 61 aa4.01□□□□□ -1.77
PXN-209ENST00000540221 R4GN34 69 aa4.01□□□□□ -1.77
PXN-209ENST00000540221 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
PXN-209ENST00000540221 ANAPC13Q9BS18 74 aa3.98□□□□□ -1.77
PXN-209ENST00000540221 A6NN06 94 aa3.97□□□□□ -1.77
PXN-209ENST00000540221 P0C880 135 aa3.97□□□□□ -1.77
PXN-209ENST00000540221 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
PXN-209ENST00000540221 M0QZ58 72 aa3.94□□□□□ -1.78
PXN-209ENST00000540221 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
PXN-209ENST00000540221 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
PXN-209ENST00000540221 PLAC4Q8WY50 150 aa3.93□□□□□ -1.78
PXN-209ENST00000540221 H7BZZ5 65 aa3.92□□□□□ -1.78
PXN-209ENST00000540221 COA5Q86WW8 74 aa3.92□□□□□ -1.78
PXN-209ENST00000540221 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
PXN-209ENST00000540221 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
PXN-209ENST00000540221 PRO2289Q9P1D8 64 aa3.91□□□□□ -1.78
PXN-209ENST00000540221 SEC61GP60059 68 aa3.89□□□□□ -1.79
PXN-209ENST00000540221 CYSTM1Q9H1C7 97 aa3.87□□□□□ -1.79
PXN-209ENST00000540221 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
PXN-209ENST00000540221 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
PXN-209ENST00000540221 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
PXN-209ENST00000540221 ATP5EP56381 51 aaPredicted RBP3.85□□□□□ -1.79
PXN-209ENST00000540221 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
PXN-209ENST00000540221 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
PXN-209ENST00000540221 MT1XP80297 61 aa3.79□□□□□ -1.8
PXN-209ENST00000540221 A0A1B0GU33 70 aa3.76□□□□□ -1.81
PXN-209ENST00000540221 TMEM258P61165 79 aa3.76□□□□□ -1.81
PXN-209ENST00000540221 V9GYY9 64 aa3.76□□□□□ -1.81
PXN-209ENST00000540221 A0A1B0GU69 56 aa3.75□□□□□ -1.81
PXN-209ENST00000540221 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
PXN-209ENST00000540221 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
PXN-209ENST00000540221 PRR15LQ9BU68 103 aa3.72□□□□□ -1.81
PXN-209ENST00000540221 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
PXN-209ENST00000540221 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
PXN-209ENST00000540221 SMIM26A0A096LP01 95 aa3.69□□□□□ -1.82
PXN-209ENST00000540221 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
PXN-209ENST00000540221 A0A0D9SG42 100 aa3.66□□□□□ -1.82
PXN-209ENST00000540221 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
PXN-209ENST00000540221 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
PXN-209ENST00000540221 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
PXN-209ENST00000540221 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
PXN-209ENST00000540221 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
PXN-209ENST00000540221 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
PXN-209ENST00000540221 NEBP20929 6669 aa3.62□□□□□ -1.83
PXN-209ENST00000540221 KMT2DO14686 5537 aa3.61□□□□□ -1.83
PXN-209ENST00000540221 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
PXN-209ENST00000540221 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
PXN-209ENST00000540221 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
PXN-209ENST00000540221 UQCR11O14957 56 aa3.58□□□□□ -1.84
PXN-209ENST00000540221 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
PXN-209ENST00000540221 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
PXN-209ENST00000540221 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
PXN-209ENST00000540221 A8MU10 97 aa3.54□□□□□ -1.84
PXN-209ENST00000540221 H3BS24 57 aa3.53□□□□□ -1.84
PXN-209ENST00000540221 RPS28P62857 69 aaKnown RBP3.53□□□□□ -1.84
PXN-209ENST00000540221 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
PXN-209ENST00000540221 SPRR2EP22531 72 aa3.51□□□□□ -1.85
PXN-209ENST00000540221 SPRR2BP35325 72 aa3.51□□□□□ -1.85
PXN-209ENST00000540221 SPRR2AP35326 72 aa3.51□□□□□ -1.85
PXN-209ENST00000540221 Q1T7F1 81 aa3.51□□□□□ -1.85
PXN-209ENST00000540221 PSPHP1O15172 72 aa3.48□□□□□ -1.85
PXN-209ENST00000540221 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
PXN-209ENST00000540221 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
PXN-209ENST00000540221 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
PXN-209ENST00000540221 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
PXN-209ENST00000540221 K7ERS5 55 aa3.46□□□□□ -1.86
PXN-209ENST00000540221 TNP1P09430 55 aa3.46□□□□□ -1.86
PXN-209ENST00000540221 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
PXN-209ENST00000540221 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
PXN-209ENST00000540221 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
PXN-209ENST00000540221 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
PXN-209ENST00000540221 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms