RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 IGKV2-30P06310 120 aa3.49□□□□□ -1.85
LPCAT3-209ENST00000540060 FAM236CP0DP71 79 aa3.49□□□□□ -1.85
LPCAT3-209ENST00000540060 TP53AIP1Q9HCN2 124 aa3.49□□□□□ -1.85
LPCAT3-209ENST00000540060 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
LPCAT3-209ENST00000540060 K7ERU9 68 aa3.47□□□□□ -1.85
LPCAT3-209ENST00000540060 M0R2T5 61 aa3.47□□□□□ -1.85
LPCAT3-209ENST00000540060 TRAV22A0A0B4J277 110 aa3.45□□□□□ -1.86
LPCAT3-209ENST00000540060 UQCRQO14949 82 aa3.42□□□□□ -1.86
LPCAT3-209ENST00000540060 MT-ATP8P03928 68 aa3.42□□□□□ -1.86
LPCAT3-209ENST00000540060 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
LPCAT3-209ENST00000540060 OCR1Q9BZK8 76 aa3.42□□□□□ -1.86
LPCAT3-209ENST00000540060 LOC101927531A0A1B0GV80 90 aa3.41□□□□□ -1.86
LPCAT3-209ENST00000540060 H0Y9P7 68 aa3.41□□□□□ -1.86
LPCAT3-209ENST00000540060 IMUPQ9GZP8 106 aa3.41□□□□□ -1.86
LPCAT3-209ENST00000540060 ATOX1O00244 68 aa3.4□□□□□ -1.87
LPCAT3-209ENST00000540060 H1FX-AS1Q4G0G2 97 aa3.4□□□□□ -1.87
LPCAT3-209ENST00000540060 CYP4F30PQ9H0H9 118 aa3.4□□□□□ -1.87
LPCAT3-209ENST00000540060 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
LPCAT3-209ENST00000540060 C1orf64Q8NEQ6 169 aa3.37□□□□□ -1.87
LPCAT3-209ENST00000540060 FAM236AA0A1B0GUQ0 79 aa3.36□□□□□ -1.87
LPCAT3-209ENST00000540060 FAM236BA0A1B0GV22 79 aa3.36□□□□□ -1.87
LPCAT3-209ENST00000540060 MT2AP02795 61 aa3.36□□□□□ -1.87
LPCAT3-209ENST00000540060 SCGB1A1P11684 91 aa3.36□□□□□ -1.87
LPCAT3-209ENST00000540060 KRTAP15-1Q3LI76 137 aa3.36□□□□□ -1.87
LPCAT3-209ENST00000540060 LINC00208Q96KT6 92 aa3.36□□□□□ -1.87
LPCAT3-209ENST00000540060 MP68P56378 58 aa3.35□□□□□ -1.87
LPCAT3-209ENST00000540060 C5orf47Q569G3 176 aa3.35□□□□□ -1.87
LPCAT3-209ENST00000540060 H3BPC8 53 aa3.33□□□□□ -1.88
LPCAT3-209ENST00000540060 MT1FP04733 61 aa3.33□□□□□ -1.88
LPCAT3-209ENST00000540060 KLKP1Q107X0 134 aa3.33□□□□□ -1.88
LPCAT3-209ENST00000540060 S4R3F8 94 aa3.33□□□□□ -1.88
LPCAT3-209ENST00000540060 LCA10Q71F78 164 aa3.32□□□□□ -1.88
LPCAT3-209ENST00000540060 SMIM20Q8N5G0 67 aa3.32□□□□□ -1.88
LPCAT3-209ENST00000540060 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
LPCAT3-209ENST00000540060 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
LPCAT3-209ENST00000540060 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
LPCAT3-209ENST00000540060 A8MUN3 132 aa3.29□□□□□ -1.88
LPCAT3-209ENST00000540060 KRTAP10-10P60014 251 aa3.29□□□□□ -1.88
LPCAT3-209ENST00000540060 CSAG1Q6PB30 78 aa3.26□□□□□ -1.89
LPCAT3-209ENST00000540060 USH2AO75445 5202 aa3.26□□□□□ -1.89
LPCAT3-209ENST00000540060 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
LPCAT3-209ENST00000540060 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
LPCAT3-209ENST00000540060 DMAC1Q96GE9 116 aa3.25□□□□□ -1.89
LPCAT3-209ENST00000540060 SNURFQ9Y675 71 aa3.23□□□□□ -1.89
LPCAT3-209ENST00000540060 NDUFC1O43677 76 aa3.22□□□□□ -1.89
LPCAT3-209ENST00000540060 C20orf197Q8N268 126 aa3.22□□□□□ -1.89
LPCAT3-209ENST00000540060 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
LPCAT3-209ENST00000540060 H0YAA0 97 aa3.19□□□□□ -1.9
LPCAT3-209ENST00000540060 COX7CP15954 63 aa3.19□□□□□ -1.9
LPCAT3-209ENST00000540060 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
LPCAT3-209ENST00000540060 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
LPCAT3-209ENST00000540060 ACYP2P14621 99 aa3.16□□□□□ -1.9
LPCAT3-209ENST00000540060 SPRR2GQ9BYE4 73 aa3.15□□□□□ -1.91
LPCAT3-209ENST00000540060 ANAPC13Q9BS18 74 aa3.14□□□□□ -1.91
LPCAT3-209ENST00000540060 CYSTM1Q9H1C7 97 aa3.14□□□□□ -1.91
LPCAT3-209ENST00000540060 ADM2Q7Z4H4 148 aa3.13□□□□□ -1.91
LPCAT3-209ENST00000540060 CRIPTQ9P021 101 aa3.13□□□□□ -1.91
LPCAT3-209ENST00000540060 H7BZZ5 65 aa3.12□□□□□ -1.91
LPCAT3-209ENST00000540060 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
LPCAT3-209ENST00000540060 KRTAP19-8Q3LI54 63 aa3.11□□□□□ -1.91
LPCAT3-209ENST00000540060 MT1BP07438 61 aa3.1□□□□□ -1.91
LPCAT3-209ENST00000540060 P0C880 135 aa3.1□□□□□ -1.91
LPCAT3-209ENST00000540060 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
LPCAT3-209ENST00000540060 SPTSSBQ8NFR3 76 aa3.1□□□□□ -1.91
LPCAT3-209ENST00000540060 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
LPCAT3-209ENST00000540060 FCGBPQ9Y6R7 5405 aaPredicted RBP3.1□□□□□ -1.91
LPCAT3-209ENST00000540060 CCDC179H3BU77 68 aa3.08□□□□□ -1.92
LPCAT3-209ENST00000540060 Q5VV11 94 aa3.08□□□□□ -1.92
LPCAT3-209ENST00000540060 COA5Q86WW8 74 aa3.08□□□□□ -1.92
LPCAT3-209ENST00000540060 R4GN34 69 aa3.05□□□□□ -1.92
LPCAT3-209ENST00000540060 M0QZ58 72 aa3.03□□□□□ -1.92
LPCAT3-209ENST00000540060 PRAC1Q96KF2 57 aa3.02□□□□□ -1.93
LPCAT3-209ENST00000540060 ATP5EP56381 51 aaPredicted RBP3.01□□□□□ -1.93
LPCAT3-209ENST00000540060 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
LPCAT3-209ENST00000540060 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
LPCAT3-209ENST00000540060 A6NN06 94 aa2.98□□□□□ -1.93
LPCAT3-209ENST00000540060 TMEM258P61165 79 aa2.98□□□□□ -1.93
LPCAT3-209ENST00000540060 LINC01554Q52M75 96 aa2.97□□□□□ -1.93
LPCAT3-209ENST00000540060 KRTAP13-4Q3LI77 160 aa2.96□□□□□ -1.94
LPCAT3-209ENST00000540060 SYNE2Q8WXH0 6885 aaKnown RBP2.95□□□□□ -1.94
LPCAT3-209ENST00000540060 SEC61GP60059 68 aa2.95□□□□□ -1.94
LPCAT3-209ENST00000540060 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
LPCAT3-209ENST00000540060 PLAC4Q8WY50 150 aa2.95□□□□□ -1.94
LPCAT3-209ENST00000540060 RPS28P62857 69 aaKnown RBP2.93□□□□□ -1.94
LPCAT3-209ENST00000540060 MT1XP80297 61 aa2.93□□□□□ -1.94
LPCAT3-209ENST00000540060 SERP1Q9Y6X1 66 aa2.93□□□□□ -1.94
LPCAT3-209ENST00000540060 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
LPCAT3-209ENST00000540060 A0A1B0GU69 56 aa2.91□□□□□ -1.94
LPCAT3-209ENST00000540060 PRO2289Q9P1D8 64 aa2.91□□□□□ -1.94
LPCAT3-209ENST00000540060 A0A1B0GU33 70 aa2.89□□□□□ -1.95
LPCAT3-209ENST00000540060 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
LPCAT3-209ENST00000540060 SPATA8Q6RVD6 105 aa2.88□□□□□ -1.95
LPCAT3-209ENST00000540060 LINC01558Q9Y6Z2 57 aa2.87□□□□□ -1.95
LPCAT3-209ENST00000540060 A0A0D9SG42 100 aa2.85□□□□□ -1.95
LPCAT3-209ENST00000540060 PRR15LQ9BU68 103 aa2.85□□□□□ -1.95
LPCAT3-209ENST00000540060 KRTAP12-2P59991 146 aa2.84□□□□□ -1.95
LPCAT3-209ENST00000540060 KMT2DO14686 5537 aa2.84□□□□□ -1.96
LPCAT3-209ENST00000540060 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
LPCAT3-209ENST00000540060 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
LPCAT3-209ENST00000540060 SMIM26A0A096LP01 95 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms