RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 A0A1B0GU69 56 aa9.25□□□□□ -0.93
COPS3-212ENST00000539941 C9orf92A6NGG3 77 aa9.25□□□□□ -0.93
COPS3-212ENST00000539941 Q5W150 140 aa9.23□□□□□ -0.93
COPS3-212ENST00000539941 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
COPS3-212ENST00000539941 A8MUU9 505 aa9.22□□□□□ -0.93
COPS3-212ENST00000539941 UQCR11O14957 56 aa9.22□□□□□ -0.93
COPS3-212ENST00000539941 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
COPS3-212ENST00000539941 DMAC1Q96GE9 116 aa9.21□□□□□ -0.93
COPS3-212ENST00000539941 MIR22HGQ0VDD5 57 aa9.2□□□□□ -0.94
COPS3-212ENST00000539941 ADM2Q7Z4H4 148 aa9.16□□□□□ -0.94
COPS3-212ENST00000539941 IGKV2-30P06310 120 aa9.1□□□□□ -0.95
COPS3-212ENST00000539941 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
COPS3-212ENST00000539941 XP32Q5T750 250 aa9.07□□□□□ -0.96
COPS3-212ENST00000539941 CSAG1Q6PB30 78 aa9.06□□□□□ -0.96
COPS3-212ENST00000539941 LRP2P98164 4655 aa9.06□□□□□ -0.96
COPS3-212ENST00000539941 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
COPS3-212ENST00000539941 IGKV2D-30A0A075B6S6 120 aa9.02□□□□□ -0.97
COPS3-212ENST00000539941 RNF213Q63HN8 5207 aa8.97□□□□□ -0.97
COPS3-212ENST00000539941 LPAP08519 4548 aa8.91□□□□□ -0.98
COPS3-212ENST00000539941 KRTAP25-1Q3LHN0 102 aa8.87□□□□□ -0.99
COPS3-212ENST00000539941 ROMO1P60602 79 aa8.83□□□□□ -1
COPS3-212ENST00000539941 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
COPS3-212ENST00000539941 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.02
COPS3-212ENST00000539941 MUC2Q02817 5179 aa8.67□□□□□ -1.02
COPS3-212ENST00000539941 K7ERS5 55 aa8.65□□□□□ -1.02
COPS3-212ENST00000539941 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.02
COPS3-212ENST00000539941 MUC17Q685J3 4493 aa8.65□□□□□ -1.02
COPS3-212ENST00000539941 H0YAA0 97 aa8.6□□□□□ -1.03
COPS3-212ENST00000539941 A0A1B0GU33 70 aa8.57□□□□□ -1.04
COPS3-212ENST00000539941 H1FX-AS1Q4G0G2 97 aa8.53□□□□□ -1.04
COPS3-212ENST00000539941 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
COPS3-212ENST00000539941 P0C880 135 aa8.44□□□□□ -1.06
COPS3-212ENST00000539941 S4R3F8 94 aa8.43□□□□□ -1.06
COPS3-212ENST00000539941 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
COPS3-212ENST00000539941 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
COPS3-212ENST00000539941 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
COPS3-212ENST00000539941 SPINT4Q6UDR6 99 aa8.32□□□□□ -1.08
COPS3-212ENST00000539941 KRTAP19-2Q3LHN2 52 aa8.31□□□□□ -1.08
COPS3-212ENST00000539941 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
COPS3-212ENST00000539941 KRTAP15-1Q3LI76 137 aa8.19□□□□□ -1.1
COPS3-212ENST00000539941 CRIPTQ9P021 101 aa8.19□□□□□ -1.1
COPS3-212ENST00000539941 FLGP20930 4061 aaPredicted RBP8.17□□□□□ -1.1
COPS3-212ENST00000539941 NDUFAF8A1L188 74 aa8.13□□□□□ -1.11
COPS3-212ENST00000539941 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
COPS3-212ENST00000539941 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
COPS3-212ENST00000539941 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
COPS3-212ENST00000539941 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
COPS3-212ENST00000539941 A0A0A0MQY5 61 aa7.95□□□□□ -1.14
COPS3-212ENST00000539941 MT1HP80294 61 aa7.93□□□□□ -1.14
COPS3-212ENST00000539941 A0A0D9SG42 100 aa7.88□□□□□ -1.15
COPS3-212ENST00000539941 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
COPS3-212ENST00000539941 M0QZ58 72 aa7.86□□□□□ -1.15
COPS3-212ENST00000539941 M0R2T5 61 aa7.86□□□□□ -1.15
COPS3-212ENST00000539941 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
COPS3-212ENST00000539941 KRTAP9-6A0A140TA67 174 aa7.83□□□□□ -1.16
COPS3-212ENST00000539941 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
COPS3-212ENST00000539941 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
COPS3-212ENST00000539941 R4GN34 69 aa7.76□□□□□ -1.17
COPS3-212ENST00000539941 FSIP2Q5CZC0 6907 aa7.74□□□□□ -1.17
COPS3-212ENST00000539941 KRTAP12-2P59991 146 aa7.71□□□□□ -1.18
COPS3-212ENST00000539941 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
COPS3-212ENST00000539941 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
COPS3-212ENST00000539941 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
COPS3-212ENST00000539941 MT2AP02795 61 aa7.63□□□□□ -1.19
COPS3-212ENST00000539941 MT1FP04733 61 aa7.57□□□□□ -1.2
COPS3-212ENST00000539941 KRTAP10-10P60014 251 aa7.57□□□□□ -1.2
COPS3-212ENST00000539941 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
COPS3-212ENST00000539941 SPRR2GQ9BYE4 73 aa7.54□□□□□ -1.2
COPS3-212ENST00000539941 KRTAP19-1Q8IUB9 90 aa7.47□□□□□ -1.21
COPS3-212ENST00000539941 USH2AO75445 5202 aa7.43□□□□□ -1.22
COPS3-212ENST00000539941 PP632Q6XCG6 107 aa7.42□□□□□ -1.22
COPS3-212ENST00000539941 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
COPS3-212ENST00000539941 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
COPS3-212ENST00000539941 KRTAP19-8Q3LI54 63 aa7.33□□□□□ -1.24
COPS3-212ENST00000539941 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
COPS3-212ENST00000539941 LCE2BO14633 110 aa7.25□□□□□ -1.25
COPS3-212ENST00000539941 MT1BP07438 61 aa7.19□□□□□ -1.26
COPS3-212ENST00000539941 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
COPS3-212ENST00000539941 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
COPS3-212ENST00000539941 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
COPS3-212ENST00000539941 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
COPS3-212ENST00000539941 SPRR5A0A1B0GTR4 108 aa7.02□□□□□ -1.29
COPS3-212ENST00000539941 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
COPS3-212ENST00000539941 MT1XP80297 61 aa6.97□□□□□ -1.29
COPS3-212ENST00000539941 TNP1P09430 55 aa6.96□□□□□ -1.3
COPS3-212ENST00000539941 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
COPS3-212ENST00000539941 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
COPS3-212ENST00000539941 MACF1Q9UPN3 7388 aaKnown RBP6.91□□□□□ -1.3
COPS3-212ENST00000539941 SYNE2Q8WXH0 6885 aaKnown RBP6.86□□□□□ -1.31
COPS3-212ENST00000539941 INE1O15225 51 aa6.84□□□□□ -1.31
COPS3-212ENST00000539941 KRTAP10-7P60409 375 aaPredicted RBP6.67□□□□□ -1.34
COPS3-212ENST00000539941 KRTAP6-3Q3LI67 103 aa6.66□□□□□ -1.34
COPS3-212ENST00000539941 KRTAP10-12P60413 245 aa6.65□□□□□ -1.35
COPS3-212ENST00000539941 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
COPS3-212ENST00000539941 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
COPS3-212ENST00000539941 MUC12Q9UKN1 5478 aa6.48□□□□□ -1.37
COPS3-212ENST00000539941 NEBP20929 6669 aa6.43□□□□□ -1.38
COPS3-212ENST00000539941 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
COPS3-212ENST00000539941 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
COPS3-212ENST00000539941 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms