RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 MMP24-AS1A0A0U1RRL7 71 aa3.57□□□□□ -1.84
PDZRN4-203ENST00000539469 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
PDZRN4-203ENST00000539469 HRES1P13985 223 aa3.56□□□□□ -1.84
PDZRN4-203ENST00000539469 LINC00472Q9H8W2 130 aa3.56□□□□□ -1.84
PDZRN4-203ENST00000539469 SPRR1BP22528 89 aa3.55□□□□□ -1.84
PDZRN4-203ENST00000539469 FAT3Q8TDW7 4589 aa3.55□□□□□ -1.84
PDZRN4-203ENST00000539469 H3BPC8 53 aa3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 LINC00483Q53H64 154 aa3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 HERC2O95714 4834 aa3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 LRP1Q07954 4544 aaKnown RBP3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 Q5VSD8 79 aa3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 RETNLBQ9BQ08 111 aa3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 A8MUU9 505 aa3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 ABCA13Q86UQ4 5058 aa3.54□□□□□ -1.84
PDZRN4-203ENST00000539469 SPINK6Q6UWN8 80 aa3.53□□□□□ -1.84
PDZRN4-203ENST00000539469 KRTAP19-1Q8IUB9 90 aa3.53□□□□□ -1.84
PDZRN4-203ENST00000539469 TNXBP22105 4242 aa3.52□□□□□ -1.85
PDZRN4-203ENST00000539469 MYCBP2O75592 4640 aa3.52□□□□□ -1.85
PDZRN4-203ENST00000539469 KRTAP13-2Q52LG2 175 aa3.52□□□□□ -1.85
PDZRN4-203ENST00000539469 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
PDZRN4-203ENST00000539469 Q5W150 140 aa3.49□□□□□ -1.85
PDZRN4-203ENST00000539469 Q96NJ1 140 aa3.49□□□□□ -1.85
PDZRN4-203ENST00000539469 IGKV2D-30A0A075B6S6 120 aa3.48□□□□□ -1.85
PDZRN4-203ENST00000539469 MRPL34Q9BQ48 92 aaKnown RBP3.47□□□□□ -1.85
PDZRN4-203ENST00000539469 TP53AIP1Q9HCN2 124 aa3.47□□□□□ -1.85
PDZRN4-203ENST00000539469 FLG2Q5D862 2391 aaPredicted RBP3.47□□□□□ -1.85
PDZRN4-203ENST00000539469 A0A1B0GU69 56 aa3.46□□□□□ -1.86
PDZRN4-203ENST00000539469 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
PDZRN4-203ENST00000539469 PCLOQ9Y6V0 5065 aa3.44□□□□□ -1.86
PDZRN4-203ENST00000539469 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
PDZRN4-203ENST00000539469 ACYP2P14621 99 aa3.44□□□□□ -1.86
PDZRN4-203ENST00000539469 SSBP3-AS1Q7Z2R9 100 aa3.43□□□□□ -1.86
PDZRN4-203ENST00000539469 SPINK1P00995 79 aa3.42□□□□□ -1.86
PDZRN4-203ENST00000539469 MIR22HGQ0VDD5 57 aa3.42□□□□□ -1.86
PDZRN4-203ENST00000539469 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
PDZRN4-203ENST00000539469 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
PDZRN4-203ENST00000539469 MT1HL1P0DM35 61 aa3.41□□□□□ -1.86
PDZRN4-203ENST00000539469 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
PDZRN4-203ENST00000539469 LINC00304Q8N9R0 145 aa3.4□□□□□ -1.86
PDZRN4-203ENST00000539469 UQCR11O14957 56 aa3.39□□□□□ -1.87
PDZRN4-203ENST00000539469 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
PDZRN4-203ENST00000539469 CRIPTQ9P021 101 aa3.38□□□□□ -1.87
PDZRN4-203ENST00000539469 ROMO1P60602 79 aa3.38□□□□□ -1.87
PDZRN4-203ENST00000539469 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
PDZRN4-203ENST00000539469 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
PDZRN4-203ENST00000539469 DMAC1Q96GE9 116 aa3.36□□□□□ -1.87
PDZRN4-203ENST00000539469 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
PDZRN4-203ENST00000539469 DMBT1Q9UGM3 2413 aaPredicted RBP3.35□□□□□ -1.87
PDZRN4-203ENST00000539469 RPS29P62273 56 aaKnown RBP3.35□□□□□ -1.87
PDZRN4-203ENST00000539469 HERC1Q15751 4861 aa3.32□□□□□ -1.88
PDZRN4-203ENST00000539469 LPAP08519 4548 aa3.32□□□□□ -1.88
PDZRN4-203ENST00000539469 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
PDZRN4-203ENST00000539469 HMCN2Q8NDA2 5059 aa3.27□□□□□ -1.89
PDZRN4-203ENST00000539469 C9orf92A6NGG3 77 aa3.27□□□□□ -1.89
PDZRN4-203ENST00000539469 H0YAA0 97 aa3.26□□□□□ -1.89
PDZRN4-203ENST00000539469 P0C880 135 aa3.26□□□□□ -1.89
PDZRN4-203ENST00000539469 LRP2P98164 4655 aa3.25□□□□□ -1.89
PDZRN4-203ENST00000539469 A0A1B0GU33 70 aa3.24□□□□□ -1.89
PDZRN4-203ENST00000539469 R4GN34 69 aa3.24□□□□□ -1.89
PDZRN4-203ENST00000539469 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
PDZRN4-203ENST00000539469 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
PDZRN4-203ENST00000539469 TPRXLQ17RH7 258 aa3.2□□□□□ -1.9
PDZRN4-203ENST00000539469 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
PDZRN4-203ENST00000539469 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
PDZRN4-203ENST00000539469 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
PDZRN4-203ENST00000539469 SPINT4Q6UDR6 99 aa3.18□□□□□ -1.9
PDZRN4-203ENST00000539469 A0A0D9SG42 100 aa3.17□□□□□ -1.9
PDZRN4-203ENST00000539469 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
PDZRN4-203ENST00000539469 H1FX-AS1Q4G0G2 97 aa3.16□□□□□ -1.9
PDZRN4-203ENST00000539469 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.9
PDZRN4-203ENST00000539469 UBR4Q5T4S7 5183 aa3.13□□□□□ -1.91
PDZRN4-203ENST00000539469 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
PDZRN4-203ENST00000539469 MUC2Q02817 5179 aa3.11□□□□□ -1.91
PDZRN4-203ENST00000539469 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
PDZRN4-203ENST00000539469 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
PDZRN4-203ENST00000539469 KRTAP13-4Q3LI77 160 aa3.07□□□□□ -1.92
PDZRN4-203ENST00000539469 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
PDZRN4-203ENST00000539469 KRTAP10-6P60371 365 aaPredicted RBP3□□□□□ -1.93
PDZRN4-203ENST00000539469 KRTAP19-2Q3LHN2 52 aa3□□□□□ -1.93
PDZRN4-203ENST00000539469 FLGP20930 4061 aaPredicted RBP2.99□□□□□ -1.93
PDZRN4-203ENST00000539469 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
PDZRN4-203ENST00000539469 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
PDZRN4-203ENST00000539469 S4R3F8 94 aa2.97□□□□□ -1.93
PDZRN4-203ENST00000539469 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
PDZRN4-203ENST00000539469 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
PDZRN4-203ENST00000539469 MT1HP80294 61 aa2.88□□□□□ -1.95
PDZRN4-203ENST00000539469 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
PDZRN4-203ENST00000539469 CRCT1Q9UGL9 99 aa2.86□□□□□ -1.95
PDZRN4-203ENST00000539469 PLAC4Q8WY50 150 aa2.82□□□□□ -1.96
PDZRN4-203ENST00000539469 M0QZ58 72 aa2.81□□□□□ -1.96
PDZRN4-203ENST00000539469 M0R2T5 61 aa2.8□□□□□ -1.96
PDZRN4-203ENST00000539469 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
PDZRN4-203ENST00000539469 MT2AP02795 61 aa2.75□□□□□ -1.97
PDZRN4-203ENST00000539469 MT1FP04733 61 aa2.75□□□□□ -1.97
PDZRN4-203ENST00000539469 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
PDZRN4-203ENST00000539469 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
PDZRN4-203ENST00000539469 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
PDZRN4-203ENST00000539469 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms