RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 MT1BP07438 61 aa10□□□□□ -0.81
SCARB1-206ENST00000539320 Q5VV11 94 aa10□□□□□ -0.81
SCARB1-206ENST00000539320 SPRR2GQ9BYE4 73 aa10□□□□□ -0.81
SCARB1-206ENST00000539320 UQCRQO14949 82 aa9.99□□□□□ -0.81
SCARB1-206ENST00000539320 CYP4F30PQ9H0H9 118 aa9.98□□□□□ -0.81
SCARB1-206ENST00000539320 ATOX1O00244 68 aa9.97□□□□□ -0.81
SCARB1-206ENST00000539320 KRTAP19-8Q3LI54 63 aa9.97□□□□□ -0.81
SCARB1-206ENST00000539320 TRAV22A0A0B4J277 110 aa9.95□□□□□ -0.82
SCARB1-206ENST00000539320 A6NN06 94 aa9.95□□□□□ -0.82
SCARB1-206ENST00000539320 H0Y9P7 68 aa9.95□□□□□ -0.82
SCARB1-206ENST00000539320 KLKP1Q107X0 134 aa9.94□□□□□ -0.82
SCARB1-206ENST00000539320 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
SCARB1-206ENST00000539320 LOC101927531A0A1B0GV80 90 aa9.92□□□□□ -0.82
SCARB1-206ENST00000539320 TRAV7A0A075B6U4 112 aa9.91□□□□□ -0.82
SCARB1-206ENST00000539320 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
SCARB1-206ENST00000539320 MP68P56378 58 aa9.87□□□□□ -0.83
SCARB1-206ENST00000539320 LINC00208Q96KT6 92 aa9.85□□□□□ -0.83
SCARB1-206ENST00000539320 SERP2Q8N6R1 65 aa9.84□□□□□ -0.83
SCARB1-206ENST00000539320 KRTAP10-5P60370 271 aa9.81□□□□□ -0.84
SCARB1-206ENST00000539320 ANAPC13Q9BS18 74 aa9.79□□□□□ -0.84
SCARB1-206ENST00000539320 CRIPTQ9P021 101 aa9.79□□□□□ -0.84
SCARB1-206ENST00000539320 NEBP20929 6669 aa9.74□□□□□ -0.85
SCARB1-206ENST00000539320 H3BPC8 53 aa9.74□□□□□ -0.85
SCARB1-206ENST00000539320 COX7CP15954 63 aa9.73□□□□□ -0.85
SCARB1-206ENST00000539320 C20orf197Q8N268 126 aa9.73□□□□□ -0.85
SCARB1-206ENST00000539320 SNURFQ9Y675 71 aa9.73□□□□□ -0.85
SCARB1-206ENST00000539320 NDUFC1O43677 76 aa9.71□□□□□ -0.86
SCARB1-206ENST00000539320 MUC12Q9UKN1 5478 aa9.7□□□□□ -0.86
SCARB1-206ENST00000539320 H0YAA0 97 aa9.67□□□□□ -0.86
SCARB1-206ENST00000539320 A8MUN3 132 aa9.65□□□□□ -0.86
SCARB1-206ENST00000539320 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
SCARB1-206ENST00000539320 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
SCARB1-206ENST00000539320 KRTAP3-2Q9BYR7 98 aa9.54□□□□□ -0.88
SCARB1-206ENST00000539320 CYSTM1Q9H1C7 97 aa9.54□□□□□ -0.88
SCARB1-206ENST00000539320 KRTAP5-9P26371 169 aa9.53□□□□□ -0.88
SCARB1-206ENST00000539320 KMT2DO14686 5537 aa9.47□□□□□ -0.89
SCARB1-206ENST00000539320 H7BZZ5 65 aa9.43□□□□□ -0.9
SCARB1-206ENST00000539320 MDN1Q9NU22 5596 aa9.4□□□□□ -0.91
SCARB1-206ENST00000539320 PCP4P48539 62 aa9.39□□□□□ -0.91
SCARB1-206ENST00000539320 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
SCARB1-206ENST00000539320 KRTAP20-1Q3LI63 56 aa9.38□□□□□ -0.91
SCARB1-206ENST00000539320 SPANXA2-OT1Q8N9U9 137 aa9.37□□□□□ -0.91
SCARB1-206ENST00000539320 DMAC1Q96GE9 116 aa9.37□□□□□ -0.91
SCARB1-206ENST00000539320 MT1XP80297 61 aa9.34□□□□□ -0.91
SCARB1-206ENST00000539320 PLAC4Q8WY50 150 aa9.34□□□□□ -0.91
SCARB1-206ENST00000539320 R4GN34 69 aa9.34□□□□□ -0.91
SCARB1-206ENST00000539320 P0C880 135 aa9.32□□□□□ -0.92
SCARB1-206ENST00000539320 ACYP2P14621 99 aa9.27□□□□□ -0.93
SCARB1-206ENST00000539320 M0QZ58 72 aa9.26□□□□□ -0.93
SCARB1-206ENST00000539320 SPRR2FQ96RM1 72 aa9.22□□□□□ -0.93
SCARB1-206ENST00000539320 TMEM258P61165 79 aa9.2□□□□□ -0.94
SCARB1-206ENST00000539320 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
SCARB1-206ENST00000539320 ATP5EP56381 51 aaPredicted RBP9.16□□□□□ -0.94
SCARB1-206ENST00000539320 KRTAP12-2P59991 146 aa9.16□□□□□ -0.94
SCARB1-206ENST00000539320 COA5Q86WW8 74 aa9.15□□□□□ -0.94
SCARB1-206ENST00000539320 KRTAP8-1Q8IUC2 63 aa9.14□□□□□ -0.95
SCARB1-206ENST00000539320 LINC01554Q52M75 96 aa9.13□□□□□ -0.95
SCARB1-206ENST00000539320 SPRR2EP22531 72 aa9.12□□□□□ -0.95
SCARB1-206ENST00000539320 SPRR2BP35325 72 aa9.12□□□□□ -0.95
SCARB1-206ENST00000539320 SPRR2AP35326 72 aa9.12□□□□□ -0.95
SCARB1-206ENST00000539320 KRTAP2-3P0C7H8 128 aa9.07□□□□□ -0.96
SCARB1-206ENST00000539320 KRTAP2-4Q9BYR9 128 aa9.07□□□□□ -0.96
SCARB1-206ENST00000539320 SPTSSBQ8NFR3 76 aa9.01□□□□□ -0.97
SCARB1-206ENST00000539320 LCE1AQ5T7P2 110 aa8.97□□□□□ -0.97
SCARB1-206ENST00000539320 KRTAP4-8A0A0G2JLE6 195 aa8.96□□□□□ -0.98
SCARB1-206ENST00000539320 KRTAP4-8Q9BYQ9 185 aa8.96□□□□□ -0.98
SCARB1-206ENST00000539320 SERP1Q9Y6X1 66 aa8.92□□□□□ -0.98
SCARB1-206ENST00000539320 KRTAP10-7P60409 375 aaPredicted RBP8.91□□□□□ -0.98
SCARB1-206ENST00000539320 KRTAP10-12P60413 245 aa8.86□□□□□ -0.99
SCARB1-206ENST00000539320 SPRR2DP22532 72 aa8.82□□□□□ -1
SCARB1-206ENST00000539320 KRTAP2-2Q9BYT5 123 aa8.78□□□□□ -1
SCARB1-206ENST00000539320 KRTAP2-1Q9BYU5 128 aa8.78□□□□□ -1
SCARB1-206ENST00000539320 SEC61GP60059 68 aa8.7□□□□□ -1.02
SCARB1-206ENST00000539320 RPS28P62857 69 aaKnown RBP8.68□□□□□ -1.02
SCARB1-206ENST00000539320 A0A1B0GU69 56 aa8.66□□□□□ -1.02
SCARB1-206ENST00000539320 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
SCARB1-206ENST00000539320 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
SCARB1-206ENST00000539320 SMIM26A0A096LP01 95 aa8.63□□□□□ -1.03
SCARB1-206ENST00000539320 LCE3BQ5TA77 95 aa8.58□□□□□ -1.04
SCARB1-206ENST00000539320 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
SCARB1-206ENST00000539320 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
SCARB1-206ENST00000539320 Q1T7F1 81 aa8.53□□□□□ -1.04
SCARB1-206ENST00000539320 V9GYY9 64 aa8.52□□□□□ -1.05
SCARB1-206ENST00000539320 A0A1B0GU33 70 aa8.5□□□□□ -1.05
SCARB1-206ENST00000539320 PSPHP1O15172 72 aa8.48□□□□□ -1.05
SCARB1-206ENST00000539320 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
SCARB1-206ENST00000539320 A0A0D9SG42 100 aa8.38□□□□□ -1.07
SCARB1-206ENST00000539320 KRTAP19-7Q3SYF9 63 aa8.35□□□□□ -1.07
SCARB1-206ENST00000539320 MT1EP04732 61 aa8.31□□□□□ -1.08
SCARB1-206ENST00000539320 UQCR11O14957 56 aa8.29□□□□□ -1.08
SCARB1-206ENST00000539320 LCE5AQ5TCM9 118 aa8.28□□□□□ -1.08
SCARB1-206ENST00000539320 A8MU10 97 aa8.26□□□□□ -1.09
SCARB1-206ENST00000539320 SPINT4Q6UDR6 99 aa8.26□□□□□ -1.09
SCARB1-206ENST00000539320 KRTAP19-3Q7Z4W3 81 aa8.26□□□□□ -1.09
SCARB1-206ENST00000539320 A6NED7 52 aa8.22□□□□□ -1.09
SCARB1-206ENST00000539320 MIR22HGQ0VDD5 57 aa8.2□□□□□ -1.1
SCARB1-206ENST00000539320 DSTQ03001 7570 aaKnown RBP8.19□□□□□ -1.1
SCARB1-206ENST00000539320 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
SCARB1-206ENST00000539320 KRTAP19-5Q3LI72 72 aa8.1□□□□□ -1.11
SCARB1-206ENST00000539320 GPR98Q8WXG9 6306 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms