RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
PBX3-212ENST00000538998 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
PBX3-212ENST00000538998 TP53AIP1Q9HCN2 124 aa6.35□□□□□ -1.39
PBX3-212ENST00000538998 IMUPQ9GZP8 106 aa6.34□□□□□ -1.39
PBX3-212ENST00000538998 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
PBX3-212ENST00000538998 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
PBX3-212ENST00000538998 Q5W150 140 aa6.31□□□□□ -1.4
PBX3-212ENST00000538998 IGKV2D-30A0A075B6S6 120 aa6.28□□□□□ -1.4
PBX3-212ENST00000538998 IGKV2-30P06310 120 aa6.28□□□□□ -1.4
PBX3-212ENST00000538998 UQCRQO14949 82 aa6.27□□□□□ -1.41
PBX3-212ENST00000538998 C5orf47Q569G3 176 aa6.27□□□□□ -1.41
PBX3-212ENST00000538998 C7orf65Q6ZTY9 151 aa6.27□□□□□ -1.41
PBX3-212ENST00000538998 TRAV22A0A0B4J277 110 aa6.24□□□□□ -1.41
PBX3-212ENST00000538998 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
PBX3-212ENST00000538998 H0Y9P7 68 aa6.22□□□□□ -1.41
PBX3-212ENST00000538998 ATOX1O00244 68 aa6.21□□□□□ -1.42
PBX3-212ENST00000538998 SPRR2EP22531 72 aa6.21□□□□□ -1.42
PBX3-212ENST00000538998 SPRR2BP35325 72 aa6.21□□□□□ -1.42
PBX3-212ENST00000538998 SPRR2AP35326 72 aa6.21□□□□□ -1.42
PBX3-212ENST00000538998 MP68P56378 58 aa6.2□□□□□ -1.42
PBX3-212ENST00000538998 C4orf26Q17RF5 130 aa6.2□□□□□ -1.42
PBX3-212ENST00000538998 OCR1Q9BZK8 76 aa6.2□□□□□ -1.42
PBX3-212ENST00000538998 SMIM20Q8N5G0 67 aa6.19□□□□□ -1.42
PBX3-212ENST00000538998 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
PBX3-212ENST00000538998 LOC101927531A0A1B0GV80 90 aa6.18□□□□□ -1.42
PBX3-212ENST00000538998 CSAG1Q6PB30 78 aa6.18□□□□□ -1.42
PBX3-212ENST00000538998 KRTAP2-2Q9BYT5 123 aa6.18□□□□□ -1.42
PBX3-212ENST00000538998 KRTAP2-1Q9BYU5 128 aa6.18□□□□□ -1.42
PBX3-212ENST00000538998 KLKP1Q107X0 134 aa6.17□□□□□ -1.42
PBX3-212ENST00000538998 S4R3F8 94 aa6.17□□□□□ -1.42
PBX3-212ENST00000538998 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
PBX3-212ENST00000538998 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.42
PBX3-212ENST00000538998 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
PBX3-212ENST00000538998 CYP4F30PQ9H0H9 118 aa6.14□□□□□ -1.43
PBX3-212ENST00000538998 H3BPC8 53 aa6.11□□□□□ -1.43
PBX3-212ENST00000538998 LCA10Q71F78 164 aa6.1□□□□□ -1.43
PBX3-212ENST00000538998 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
PBX3-212ENST00000538998 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
PBX3-212ENST00000538998 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
PBX3-212ENST00000538998 SERP2Q8N6R1 65 aa6.06□□□□□ -1.44
PBX3-212ENST00000538998 SPRR2DP22532 72 aa6.02□□□□□ -1.45
PBX3-212ENST00000538998 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
PBX3-212ENST00000538998 PRO2289Q9P1D8 64 aa6.01□□□□□ -1.45
PBX3-212ENST00000538998 C20orf197Q8N268 126 aa6□□□□□ -1.45
PBX3-212ENST00000538998 SNURFQ9Y675 71 aa6□□□□□ -1.45
PBX3-212ENST00000538998 ANAPC13Q9BS18 74 aa5.98□□□□□ -1.45
PBX3-212ENST00000538998 COX7CP15954 63 aa5.97□□□□□ -1.45
PBX3-212ENST00000538998 A8MUN3 132 aa5.93□□□□□ -1.46
PBX3-212ENST00000538998 MT1XP80297 61 aa5.92□□□□□ -1.46
PBX3-212ENST00000538998 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.46
PBX3-212ENST00000538998 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
PBX3-212ENST00000538998 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
PBX3-212ENST00000538998 NDUFC1O43677 76 aa5.86□□□□□ -1.47
PBX3-212ENST00000538998 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
PBX3-212ENST00000538998 GPR98Q8WXG9 6306 aa5.85□□□□□ -1.47
PBX3-212ENST00000538998 ACYP2P14621 99 aa5.84□□□□□ -1.47
PBX3-212ENST00000538998 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
PBX3-212ENST00000538998 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
PBX3-212ENST00000538998 H0YAA0 97 aa5.83□□□□□ -1.48
PBX3-212ENST00000538998 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
PBX3-212ENST00000538998 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
PBX3-212ENST00000538998 CCDC179H3BU77 68 aa5.81□□□□□ -1.48
PBX3-212ENST00000538998 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
PBX3-212ENST00000538998 CHKB-CPT1BH3BT56 60 aa5.78□□□□□ -1.48
PBX3-212ENST00000538998 H7BZZ5 65 aa5.77□□□□□ -1.49
PBX3-212ENST00000538998 CYSTM1Q9H1C7 97 aa5.76□□□□□ -1.49
PBX3-212ENST00000538998 SPTSSBQ8NFR3 76 aa5.74□□□□□ -1.49
PBX3-212ENST00000538998 ADM2Q7Z4H4 148 aa5.72□□□□□ -1.49
PBX3-212ENST00000538998 COA5Q86WW8 74 aa5.67□□□□□ -1.5
PBX3-212ENST00000538998 H3BS24 57 aa5.66□□□□□ -1.5
PBX3-212ENST00000538998 ATP5EP56381 51 aaPredicted RBP5.65□□□□□ -1.5
PBX3-212ENST00000538998 R4GN34 69 aa5.65□□□□□ -1.5
PBX3-212ENST00000538998 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
PBX3-212ENST00000538998 TMEM258P61165 79 aa5.63□□□□□ -1.51
PBX3-212ENST00000538998 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
PBX3-212ENST00000538998 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
PBX3-212ENST00000538998 PCP4P48539 62 aa5.6□□□□□ -1.51
PBX3-212ENST00000538998 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
PBX3-212ENST00000538998 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
PBX3-212ENST00000538998 M0QZ58 72 aa5.56□□□□□ -1.52
PBX3-212ENST00000538998 P0C880 135 aa5.52□□□□□ -1.53
PBX3-212ENST00000538998 SEC61GP60059 68 aa5.52□□□□□ -1.53
PBX3-212ENST00000538998 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
PBX3-212ENST00000538998 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
PBX3-212ENST00000538998 SERP1Q9Y6X1 66 aa5.49□□□□□ -1.53
PBX3-212ENST00000538998 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
PBX3-212ENST00000538998 A0A1B0GU69 56 aa5.41□□□□□ -1.54
PBX3-212ENST00000538998 PRR15LQ9BU68 103 aa5.37□□□□□ -1.55
PBX3-212ENST00000538998 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
PBX3-212ENST00000538998 HMCN1Q96RW7 5635 aa5.35□□□□□ -1.55
PBX3-212ENST00000538998 A0A1B0GU33 70 aa5.34□□□□□ -1.55
PBX3-212ENST00000538998 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
PBX3-212ENST00000538998 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
PBX3-212ENST00000538998 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
PBX3-212ENST00000538998 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
PBX3-212ENST00000538998 V9GYY9 64 aa5.29□□□□□ -1.56
PBX3-212ENST00000538998 SMIM26A0A096LP01 95 aa5.28□□□□□ -1.56
PBX3-212ENST00000538998 MT1EP04732 61 aa5.28□□□□□ -1.56
PBX3-212ENST00000538998 MT4P47944 62 aa5.28□□□□□ -1.56
PBX3-212ENST00000538998 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms