RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
GGA3-202ENST00000538886 IGKV2-30P06310 120 aa4.94□□□□□ -1.62
GGA3-202ENST00000538886 LINC00472Q9H8W2 130 aa4.93□□□□□ -1.62
GGA3-202ENST00000538886 PCLOQ9Y6V0 5065 aa4.91□□□□□ -1.62
GGA3-202ENST00000538886 A0A1B0GVX0 72 aa4.9□□□□□ -1.62
GGA3-202ENST00000538886 K7ERS5 55 aa4.9□□□□□ -1.62
GGA3-202ENST00000538886 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
GGA3-202ENST00000538886 HERC1Q15751 4861 aa4.88□□□□□ -1.63
GGA3-202ENST00000538886 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
GGA3-202ENST00000538886 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
GGA3-202ENST00000538886 NOTCH2NLQ7Z3S9 236 aa4.86□□□□□ -1.63
GGA3-202ENST00000538886 M0R2T5 61 aa4.86□□□□□ -1.63
GGA3-202ENST00000538886 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
GGA3-202ENST00000538886 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
GGA3-202ENST00000538886 A8MUU9 505 aa4.84□□□□□ -1.63
GGA3-202ENST00000538886 KRTAP16-1A8MUX0 517 aa4.84□□□□□ -1.64
GGA3-202ENST00000538886 Q5W150 140 aa4.83□□□□□ -1.64
GGA3-202ENST00000538886 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
GGA3-202ENST00000538886 DMAC1Q96GE9 116 aa4.81□□□□□ -1.64
GGA3-202ENST00000538886 LRP2P98164 4655 aa4.8□□□□□ -1.64
GGA3-202ENST00000538886 XP32Q5T750 250 aa4.8□□□□□ -1.64
GGA3-202ENST00000538886 TPRXLQ17RH7 258 aa4.78□□□□□ -1.64
GGA3-202ENST00000538886 KRTAP13-3Q3SY46 172 aa4.78□□□□□ -1.64
GGA3-202ENST00000538886 P0C880 135 aa4.77□□□□□ -1.65
GGA3-202ENST00000538886 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
GGA3-202ENST00000538886 RPL37P61927 97 aaKnown RBP4.72□□□□□ -1.65
GGA3-202ENST00000538886 A0A1B0GU33 70 aa4.71□□□□□ -1.66
GGA3-202ENST00000538886 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
GGA3-202ENST00000538886 UBR4Q5T4S7 5183 aa4.69□□□□□ -1.66
GGA3-202ENST00000538886 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
GGA3-202ENST00000538886 A0A0D9SG42 100 aa4.66□□□□□ -1.66
GGA3-202ENST00000538886 LCE2DQ5TA82 110 aaPredicted RBP4.66□□□□□ -1.66
GGA3-202ENST00000538886 LPAP08519 4548 aa4.65□□□□□ -1.66
GGA3-202ENST00000538886 H0YAA0 97 aa4.64□□□□□ -1.67
GGA3-202ENST00000538886 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
GGA3-202ENST00000538886 MUC2Q02817 5179 aa4.59□□□□□ -1.68
GGA3-202ENST00000538886 PKHD1L1Q86WI1 4243 aa4.58□□□□□ -1.68
GGA3-202ENST00000538886 H1FX-AS1Q4G0G2 97 aa4.58□□□□□ -1.68
GGA3-202ENST00000538886 TNXBP22105 4242 aa4.54□□□□□ -1.68
GGA3-202ENST00000538886 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
GGA3-202ENST00000538886 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
GGA3-202ENST00000538886 S4R3F8 94 aa4.46□□□□□ -1.7
GGA3-202ENST00000538886 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
GGA3-202ENST00000538886 LCE2CQ5TA81 110 aa4.42□□□□□ -1.7
GGA3-202ENST00000538886 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
GGA3-202ENST00000538886 FAT4Q6V0I7 4981 aa4.4□□□□□ -1.71
GGA3-202ENST00000538886 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
GGA3-202ENST00000538886 LCE2BO14633 110 aa4.33□□□□□ -1.72
GGA3-202ENST00000538886 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
GGA3-202ENST00000538886 R4GN34 69 aa4.28□□□□□ -1.72
GGA3-202ENST00000538886 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
GGA3-202ENST00000538886 MT1HP80294 61 aa4.25□□□□□ -1.73
GGA3-202ENST00000538886 PLAC4Q8WY50 150 aa4.25□□□□□ -1.73
GGA3-202ENST00000538886 KRTAP3-1Q9BYR8 98 aa4.23□□□□□ -1.73
GGA3-202ENST00000538886 M0QZ58 72 aa4.23□□□□□ -1.73
GGA3-202ENST00000538886 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
GGA3-202ENST00000538886 KRTAP12-2P59991 146 aa4.18□□□□□ -1.74
GGA3-202ENST00000538886 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.75
GGA3-202ENST00000538886 CAMK2N1Q7Z7J9 78 aa4.13□□□□□ -1.75
GGA3-202ENST00000538886 KRTAP19-2Q3LHN2 52 aa4.08□□□□□ -1.76
GGA3-202ENST00000538886 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
GGA3-202ENST00000538886 MT2AP02795 61 aa4.05□□□□□ -1.76
GGA3-202ENST00000538886 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
GGA3-202ENST00000538886 MT1FP04733 61 aa4.03□□□□□ -1.76
GGA3-202ENST00000538886 LORP23490 312 aaPredicted RBP4.01□□□□□ -1.77
GGA3-202ENST00000538886 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
GGA3-202ENST00000538886 FLGP20930 4061 aaPredicted RBP3.99□□□□□ -1.77
GGA3-202ENST00000538886 USH2AO75445 5202 aa3.96□□□□□ -1.78
GGA3-202ENST00000538886 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
GGA3-202ENST00000538886 PRO2289Q9P1D8 64 aa3.86□□□□□ -1.79
GGA3-202ENST00000538886 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
GGA3-202ENST00000538886 CRCT1Q9UGL9 99 aa3.85□□□□□ -1.79
GGA3-202ENST00000538886 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
GGA3-202ENST00000538886 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
GGA3-202ENST00000538886 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
GGA3-202ENST00000538886 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
GGA3-202ENST00000538886 TNP1P09430 55 aa3.72□□□□□ -1.81
GGA3-202ENST00000538886 INE1O15225 51 aa3.67□□□□□ -1.82
GGA3-202ENST00000538886 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
GGA3-202ENST00000538886 MT1BP07438 61 aa3.67□□□□□ -1.82
GGA3-202ENST00000538886 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
GGA3-202ENST00000538886 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
GGA3-202ENST00000538886 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
GGA3-202ENST00000538886 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
GGA3-202ENST00000538886 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
GGA3-202ENST00000538886 KMT2DO14686 5537 aa3.55□□□□□ -1.84
GGA3-202ENST00000538886 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
GGA3-202ENST00000538886 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
GGA3-202ENST00000538886 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
GGA3-202ENST00000538886 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
GGA3-202ENST00000538886 MT1XP80297 61 aa3.53□□□□□ -1.84
GGA3-202ENST00000538886 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
GGA3-202ENST00000538886 KRTAP4-8Q9BYQ9 185 aa3.51□□□□□ -1.85
GGA3-202ENST00000538886 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
GGA3-202ENST00000538886 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
GGA3-202ENST00000538886 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
GGA3-202ENST00000538886 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
GGA3-202ENST00000538886 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
GGA3-202ENST00000538886 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
GGA3-202ENST00000538886 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms