RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SEC61GP60059 68 aa10.33□□□□□ -0.76
DDX55-205ENST00000538744 RBM12B-AS1Q9P1G2 102 aa10.3□□□□□ -0.76
DDX55-205ENST00000538744 H1FX-AS1Q4G0G2 97 aa10.29□□□□□ -0.76
DDX55-205ENST00000538744 S4R3F8 94 aa10.29□□□□□ -0.76
DDX55-205ENST00000538744 LCA10Q71F78 164 aa10.27□□□□□ -0.76
DDX55-205ENST00000538744 CDC42SE1Q9NRR8 79 aa10.27□□□□□ -0.77
DDX55-205ENST00000538744 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
DDX55-205ENST00000538744 A8MU10 97 aa10.24□□□□□ -0.77
DDX55-205ENST00000538744 SVIPQ8NHG7 77 aa10.21□□□□□ -0.77
DDX55-205ENST00000538744 UQCR11O14957 56 aa10.2□□□□□ -0.78
DDX55-205ENST00000538744 SPATA8Q6RVD6 105 aa10.12□□□□□ -0.79
DDX55-205ENST00000538744 KRTAP4-1Q9BYQ7 146 aa10.12□□□□□ -0.79
DDX55-205ENST00000538744 MIR22HGQ0VDD5 57 aa10.11□□□□□ -0.79
DDX55-205ENST00000538744 A0A1B0GU33 70 aa10.05□□□□□ -0.8
DDX55-205ENST00000538744 MUC17Q685J3 4493 aa10.02□□□□□ -0.8
DDX55-205ENST00000538744 CSAG1Q6PB30 78 aa10.02□□□□□ -0.81
DDX55-205ENST00000538744 PCLOQ9Y6V0 5065 aa10.01□□□□□ -0.81
DDX55-205ENST00000538744 KRTAP10-6P60371 365 aaPredicted RBP9.96□□□□□ -0.81
DDX55-205ENST00000538744 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
DDX55-205ENST00000538744 PMAIP1Q13794 54 aa9.95□□□□□ -0.82
DDX55-205ENST00000538744 H0YAA0 97 aa9.94□□□□□ -0.82
DDX55-205ENST00000538744 KRTAP19-2Q3LHN2 52 aa9.9□□□□□ -0.83
DDX55-205ENST00000538744 HERC1Q15751 4861 aa9.88□□□□□ -0.83
DDX55-205ENST00000538744 ADM2Q7Z4H4 148 aa9.87□□□□□ -0.83
DDX55-205ENST00000538744 HMCN2Q8NDA2 5059 aa9.85□□□□□ -0.83
DDX55-205ENST00000538744 A6NN06 94 aa9.85□□□□□ -0.83
DDX55-205ENST00000538744 P0C880 135 aa9.85□□□□□ -0.83
DDX55-205ENST00000538744 KRTAP13-4Q3LI77 160 aa9.74□□□□□ -0.85
DDX55-205ENST00000538744 M0QZ58 72 aa9.62□□□□□ -0.87
DDX55-205ENST00000538744 KTN1-AS1Q86SY8 53 aa9.62□□□□□ -0.87
DDX55-205ENST00000538744 A0A0D9SG42 100 aa9.61□□□□□ -0.87
DDX55-205ENST00000538744 K7ERS5 55 aa9.61□□□□□ -0.87
DDX55-205ENST00000538744 MUC2Q02817 5179 aa9.56□□□□□ -0.88
DDX55-205ENST00000538744 LCE2CQ5TA81 110 aa9.55□□□□□ -0.88
DDX55-205ENST00000538744 FLGP20930 4061 aaPredicted RBP9.54□□□□□ -0.88
DDX55-205ENST00000538744 R4GN34 69 aa9.5□□□□□ -0.89
DDX55-205ENST00000538744 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
DDX55-205ENST00000538744 KRTAP12-1P59990 96 aa9.39□□□□□ -0.91
DDX55-205ENST00000538744 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
DDX55-205ENST00000538744 LINC01554Q52M75 96 aa9.35□□□□□ -0.91
DDX55-205ENST00000538744 SPINT4Q6UDR6 99 aa9.35□□□□□ -0.91
DDX55-205ENST00000538744 MT1HP80294 61 aa9.34□□□□□ -0.91
DDX55-205ENST00000538744 RNF213Q63HN8 5207 aa9.32□□□□□ -0.92
DDX55-205ENST00000538744 M0R2T5 61 aa9.31□□□□□ -0.92
DDX55-205ENST00000538744 UBR4Q5T4S7 5183 aa9.31□□□□□ -0.92
DDX55-205ENST00000538744 PRAC1Q96KF2 57 aa9.29□□□□□ -0.92
DDX55-205ENST00000538744 CRIPTQ9P021 101 aa9.29□□□□□ -0.92
DDX55-205ENST00000538744 ROMO1P60602 79 aa9.25□□□□□ -0.93
DDX55-205ENST00000538744 FAT4Q6V0I7 4981 aa9.16□□□□□ -0.94
DDX55-205ENST00000538744 MT2AP02795 61 aa9.05□□□□□ -0.96
DDX55-205ENST00000538744 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
DDX55-205ENST00000538744 KRTAP9-8Q9BYQ0 159 aa9.03□□□□□ -0.96
DDX55-205ENST00000538744 SPRR2GQ9BYE4 73 aa9.02□□□□□ -0.97
DDX55-205ENST00000538744 KRTAP25-1Q3LHN0 102 aa9.01□□□□□ -0.97
DDX55-205ENST00000538744 MT1FP04733 61 aa9□□□□□ -0.97
DDX55-205ENST00000538744 KRTAP10-10P60014 251 aa9□□□□□ -0.97
DDX55-205ENST00000538744 KRTAP19-1Q8IUB9 90 aa8.95□□□□□ -0.98
DDX55-205ENST00000538744 CAMK2N1Q7Z7J9 78 aa8.94□□□□□ -0.98
DDX55-205ENST00000538744 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
DDX55-205ENST00000538744 PLAC4Q8WY50 150 aa8.8□□□□□ -1
DDX55-205ENST00000538744 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
DDX55-205ENST00000538744 KRTAP19-8Q3LI54 63 aa8.73□□□□□ -1.01
DDX55-205ENST00000538744 KRTAP9-3Q9BYQ3 159 aa8.7□□□□□ -1.02
DDX55-205ENST00000538744 MT1BP07438 61 aa8.59□□□□□ -1.03
DDX55-205ENST00000538744 TNP1P09430 55 aa8.54□□□□□ -1.04
DDX55-205ENST00000538744 PP632Q6XCG6 107 aa8.46□□□□□ -1.05
DDX55-205ENST00000538744 LCE2BO14633 110 aa8.4□□□□□ -1.06
DDX55-205ENST00000538744 MT1XP80297 61 aa8.38□□□□□ -1.07
DDX55-205ENST00000538744 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
DDX55-205ENST00000538744 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
DDX55-205ENST00000538744 PRO2289Q9P1D8 64 aa8.26□□□□□ -1.09
DDX55-205ENST00000538744 LCE3AQ5TA76 89 aa8.13□□□□□ -1.11
DDX55-205ENST00000538744 KRTAP10-7P60409 375 aaPredicted RBP8.06□□□□□ -1.12
DDX55-205ENST00000538744 KRTAP10-12P60413 245 aa8.06□□□□□ -1.12
DDX55-205ENST00000538744 KRTAP15-1Q3LI76 137 aa8.03□□□□□ -1.12
DDX55-205ENST00000538744 KRTAP8-1Q8IUC2 63 aa7.97□□□□□ -1.13
DDX55-205ENST00000538744 USH2AO75445 5202 aa7.96□□□□□ -1.13
DDX55-205ENST00000538744 KRTAP19-6Q3LI70 58 aa7.82□□□□□ -1.16
DDX55-205ENST00000538744 KRTAP12-3P60328 96 aa7.8□□□□□ -1.16
DDX55-205ENST00000538744 SSPOA2VEC9 5147 aa7.75□□□□□ -1.17
DDX55-205ENST00000538744 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
DDX55-205ENST00000538744 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
DDX55-205ENST00000538744 KRTAP19-5Q3LI72 72 aa7.65□□□□□ -1.18
DDX55-205ENST00000538744 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
DDX55-205ENST00000538744 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
DDX55-205ENST00000538744 LUZP6Q538Z0 58 aa7.52□□□□□ -1.21
DDX55-205ENST00000538744 KRTAP19-7Q3SYF9 63 aa7.47□□□□□ -1.21
DDX55-205ENST00000538744 KMT2DO14686 5537 aa7.44□□□□□ -1.22
DDX55-205ENST00000538744 FSIP2Q5CZC0 6907 aa7.39□□□□□ -1.23
DDX55-205ENST00000538744 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
DDX55-205ENST00000538744 MT1EP04732 61 aa7.32□□□□□ -1.24
DDX55-205ENST00000538744 LCE3CQ5T5A8 94 aa7.3□□□□□ -1.24
DDX55-205ENST00000538744 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
DDX55-205ENST00000538744 KRTAP19-4Q3LI73 84 aa7.24□□□□□ -1.25
DDX55-205ENST00000538744 MT1LQ93083 61 aa7.23□□□□□ -1.25
DDX55-205ENST00000538744 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.26
DDX55-205ENST00000538744 H3BS24 57 aa7.1□□□□□ -1.27
DDX55-205ENST00000538744 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
DDX55-205ENST00000538744 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
DDX55-205ENST00000538744 KRTAP19-3Q7Z4W3 81 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms