RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 M0QZ58 72 aa4.25□□□□□ -1.73
SRGAP1-202ENST00000537556 DNAH6Q9C0G6 4158 aa4.23□□□□□ -1.73
SRGAP1-202ENST00000537556 DNAH2Q9P225 4427 aa4.22□□□□□ -1.73
SRGAP1-202ENST00000537556 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
SRGAP1-202ENST00000537556 RYR3Q15413 4870 aa4.21□□□□□ -1.73
SRGAP1-202ENST00000537556 STARD9Q9P2P6 4700 aa4.21□□□□□ -1.74
SRGAP1-202ENST00000537556 SACSQ9NZJ4 4579 aa4.21□□□□□ -1.74
SRGAP1-202ENST00000537556 RYR2Q92736 4967 aa4.2□□□□□ -1.74
SRGAP1-202ENST00000537556 LCE2DQ5TA82 110 aaPredicted RBP4.19□□□□□ -1.74
SRGAP1-202ENST00000537556 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
SRGAP1-202ENST00000537556 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.74
SRGAP1-202ENST00000537556 KRTAP10-8P60410 259 aa4.14□□□□□ -1.75
SRGAP1-202ENST00000537556 KRTAP10-2P60368 255 aa4.14□□□□□ -1.75
SRGAP1-202ENST00000537556 LRP1BQ9NZR2 4599 aa4.14□□□□□ -1.75
SRGAP1-202ENST00000537556 KRTAP10-1P60331 282 aa4.11□□□□□ -1.75
SRGAP1-202ENST00000537556 HYDINQ4G0P3 5121 aa4.1□□□□□ -1.75
SRGAP1-202ENST00000537556 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
SRGAP1-202ENST00000537556 VPS13BQ7Z7G8 4022 aa4.09□□□□□ -1.75
SRGAP1-202ENST00000537556 BIRC6Q9NR09 4857 aa4.08□□□□□ -1.76
SRGAP1-202ENST00000537556 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
SRGAP1-202ENST00000537556 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
SRGAP1-202ENST00000537556 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
SRGAP1-202ENST00000537556 R4GN34 69 aa4.02□□□□□ -1.77
SRGAP1-202ENST00000537556 A0A1B0GVY2 172 aa4.01□□□□□ -1.77
SRGAP1-202ENST00000537556 INE1O15225 51 aa4□□□□□ -1.77
SRGAP1-202ENST00000537556 FAT2Q9NYQ8 4349 aa4□□□□□ -1.77
SRGAP1-202ENST00000537556 J3QL48 77 aa3.99□□□□□ -1.77
SRGAP1-202ENST00000537556 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
SRGAP1-202ENST00000537556 MYCBP2O75592 4640 aa3.99□□□□□ -1.77
SRGAP1-202ENST00000537556 PKD1P98161 4303 aa3.97□□□□□ -1.77
SRGAP1-202ENST00000537556 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
SRGAP1-202ENST00000537556 HERC2O95714 4834 aa3.96□□□□□ -1.78
SRGAP1-202ENST00000537556 DYNC1H1Q14204 4646 aaKnown RBP3.95□□□□□ -1.78
SRGAP1-202ENST00000537556 PKHD1L1Q86WI1 4243 aa3.94□□□□□ -1.78
SRGAP1-202ENST00000537556 PKHD1P08F94 4074 aa3.93□□□□□ -1.78
SRGAP1-202ENST00000537556 LRP1Q07954 4544 aaKnown RBP3.9□□□□□ -1.78
SRGAP1-202ENST00000537556 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
SRGAP1-202ENST00000537556 KIAA1109Q2LD37 5005 aa3.87□□□□□ -1.79
SRGAP1-202ENST00000537556 RYR1P21817 5038 aa3.87□□□□□ -1.79
SRGAP1-202ENST00000537556 SMR3BP02814 79 aaPredicted RBP3.86□□□□□ -1.79
SRGAP1-202ENST00000537556 HSPG2P98160 4391 aa3.86□□□□□ -1.79
SRGAP1-202ENST00000537556 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
SRGAP1-202ENST00000537556 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
SRGAP1-202ENST00000537556 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
SRGAP1-202ENST00000537556 TNP1P09430 55 aa3.81□□□□□ -1.8
SRGAP1-202ENST00000537556 TNXBP22105 4242 aa3.78□□□□□ -1.8
SRGAP1-202ENST00000537556 KRTAP10-4P60372 401 aaPredicted RBP3.77□□□□□ -1.81
SRGAP1-202ENST00000537556 Q5VSD8 79 aa3.77□□□□□ -1.81
SRGAP1-202ENST00000537556 ABCA13Q86UQ4 5058 aa3.77□□□□□ -1.81
SRGAP1-202ENST00000537556 KRTAP4-5Q9BYR2 181 aa3.76□□□□□ -1.81
SRGAP1-202ENST00000537556 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
SRGAP1-202ENST00000537556 FAT1Q14517 4588 aa3.71□□□□□ -1.82
SRGAP1-202ENST00000537556 LPAP08519 4548 aa3.61□□□□□ -1.83
SRGAP1-202ENST00000537556 HERC1Q15751 4861 aa3.6□□□□□ -1.83
SRGAP1-202ENST00000537556 MT1HL1P0DM35 61 aa3.56□□□□□ -1.84
SRGAP1-202ENST00000537556 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.85
SRGAP1-202ENST00000537556 LRP2P98164 4655 aa3.52□□□□□ -1.85
SRGAP1-202ENST00000537556 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
SRGAP1-202ENST00000537556 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
SRGAP1-202ENST00000537556 KRTAP4-8Q9BYQ9 185 aa3.42□□□□□ -1.86
SRGAP1-202ENST00000537556 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
SRGAP1-202ENST00000537556 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
SRGAP1-202ENST00000537556 KRTAP10-10P60014 251 aa3.4□□□□□ -1.86
SRGAP1-202ENST00000537556 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.86
SRGAP1-202ENST00000537556 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
SRGAP1-202ENST00000537556 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
SRGAP1-202ENST00000537556 KRTAP10-12P60413 245 aa3.34□□□□□ -1.87
SRGAP1-202ENST00000537556 KRTAP19-2Q3LHN2 52 aa3.31□□□□□ -1.88
SRGAP1-202ENST00000537556 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
SRGAP1-202ENST00000537556 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
SRGAP1-202ENST00000537556 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
SRGAP1-202ENST00000537556 KRTAP4-1Q9BYQ7 146 aa3.29□□□□□ -1.88
SRGAP1-202ENST00000537556 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
SRGAP1-202ENST00000537556 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
SRGAP1-202ENST00000537556 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
SRGAP1-202ENST00000537556 KRTAP9-2Q9BYQ4 174 aa3.24□□□□□ -1.89
SRGAP1-202ENST00000537556 KRTAP9-6A0A140TA67 174 aa3.22□□□□□ -1.89
SRGAP1-202ENST00000537556 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.21□□□□□ -1.9
SRGAP1-202ENST00000537556 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
SRGAP1-202ENST00000537556 LCE2AQ5TA79 106 aaPredicted RBP3.2□□□□□ -1.9
SRGAP1-202ENST00000537556 LCE3BQ5TA77 95 aa3.19□□□□□ -1.9
SRGAP1-202ENST00000537556 KRTAP19-1Q8IUB9 90 aa3.18□□□□□ -1.9
SRGAP1-202ENST00000537556 MUC2Q02817 5179 aa3.15□□□□□ -1.9
SRGAP1-202ENST00000537556 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
SRGAP1-202ENST00000537556 LCE2BO14633 110 aa3.14□□□□□ -1.91
SRGAP1-202ENST00000537556 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
SRGAP1-202ENST00000537556 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
SRGAP1-202ENST00000537556 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
SRGAP1-202ENST00000537556 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
SRGAP1-202ENST00000537556 LCE2CQ5TA81 110 aa3.06□□□□□ -1.92
SRGAP1-202ENST00000537556 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
SRGAP1-202ENST00000537556 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
SRGAP1-202ENST00000537556 M0R2T5 61 aa3.05□□□□□ -1.92
SRGAP1-202ENST00000537556 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
SRGAP1-202ENST00000537556 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
SRGAP1-202ENST00000537556 MT1XP80297 61 aa3.04□□□□□ -1.92
SRGAP1-202ENST00000537556 MT1HP80294 61 aa3.02□□□□□ -1.93
SRGAP1-202ENST00000537556 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
SRGAP1-202ENST00000537556 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
SRGAP1-202ENST00000537556 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms