RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 WFDC13Q8IUB5 93 aa1.26□□□□□ -2.21
SNHG1-202ENST00000535689 LINC00308Q8TCZ7 52 aa1.26□□□□□ -2.21
SNHG1-202ENST00000535689 BAALC-AS2P0C853 105 aa1.25□□□□□ -2.21
SNHG1-202ENST00000535689 IFITM1P13164 125 aa1.25□□□□□ -2.21
SNHG1-202ENST00000535689 NPC2P61916 151 aa1.25□□□□□ -2.21
SNHG1-202ENST00000535689 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.25□□□□□ -2.21
SNHG1-202ENST00000535689 C7orf65Q6ZTY9 151 aa1.25□□□□□ -2.21
SNHG1-202ENST00000535689 CHCHD1Q96BP2 118 aaKnown RBP1.25□□□□□ -2.21
SNHG1-202ENST00000535689 NDUFB1O75438 58 aa1.24□□□□□ -2.21
SNHG1-202ENST00000535689 DPM2O94777 84 aa1.24□□□□□ -2.21
SNHG1-202ENST00000535689 IGKCP01834 107 aa1.24□□□□□ -2.21
SNHG1-202ENST00000535689 KRTAP19-8Q3LI54 63 aa1.24□□□□□ -2.21
SNHG1-202ENST00000535689 KRTAP8-1Q8IUC2 63 aa1.24□□□□□ -2.21
SNHG1-202ENST00000535689 SMIM20Q8N5G0 67 aa1.24□□□□□ -2.21
SNHG1-202ENST00000535689 C18orf32Q8TCD1 76 aa1.24□□□□□ -2.21
SNHG1-202ENST00000535689 CYSTM1Q9H1C7 97 aa1.24□□□□□ -2.21
SNHG1-202ENST00000535689 CRIPTQ9P021 101 aa1.24□□□□□ -2.21
SNHG1-202ENST00000535689 A0A087WSZ3 146 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 LEPROTL1O95214 131 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 BVES-AS1Q5T3Y7 98 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 CSAG1Q6PB30 78 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 LINC00575Q6W349 94 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 Q6ZQY7 126 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 COA5Q86WW8 74 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 PRR15Q8IV56 129 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 RAB37Q96AX2 223 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 SPRR2GQ9BYE4 73 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 C14orf132Q9NPU4 83 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 HSPB8Q9UJY1 196 aa1.23□□□□□ -2.21
SNHG1-202ENST00000535689 IGKV3D-7A0A0C4DH55 119 aa1.22□□□□□ -2.21
SNHG1-202ENST00000535689 J3KT08 172 aa1.22□□□□□ -2.21
SNHG1-202ENST00000535689 TAX1BP3O14907 124 aa1.22□□□□□ -2.21
SNHG1-202ENST00000535689 MT1BP07438 61 aa1.22□□□□□ -2.21
SNHG1-202ENST00000535689 PMCHL1Q16048 86 aa1.22□□□□□ -2.21
SNHG1-202ENST00000535689 TRBV7-4A0A0J9YYF1 115 aa1.21□□□□□ -2.22
SNHG1-202ENST00000535689 TSTD3H0UI37 97 aa1.21□□□□□ -2.22
SNHG1-202ENST00000535689 H3BMG7 143 aa1.21□□□□□ -2.22
SNHG1-202ENST00000535689 SMIM11BQ8TCY0 68 aa1.21□□□□□ -2.22
SNHG1-202ENST00000535689 PLAC4Q8WY50 150 aa1.21□□□□□ -2.22
SNHG1-202ENST00000535689 H0YGX0 51 aa1.2□□□□□ -2.22
SNHG1-202ENST00000535689 TMEM256-PLSCR3K7ERE1 68 aa1.2□□□□□ -2.22
SNHG1-202ENST00000535689 KLKP1Q107X0 134 aa1.2□□□□□ -2.22
SNHG1-202ENST00000535689 Q6ZQT0 140 aa1.2□□□□□ -2.22
SNHG1-202ENST00000535689 DSTQ03001 7570 aaKnown RBP1.19□□□□□ -2.22
SNHG1-202ENST00000535689 A0A1B0GX51 115 aa1.19□□□□□ -2.22
SNHG1-202ENST00000535689 K7EQZ3 153 aa1.19□□□□□ -2.22
SNHG1-202ENST00000535689 Q1T7F1 81 aa1.19□□□□□ -2.22
SNHG1-202ENST00000535689 MUSTN1Q8IVN3 82 aa1.19□□□□□ -2.22
SNHG1-202ENST00000535689 H3BUT2 72 aa1.18□□□□□ -2.22
SNHG1-202ENST00000535689 HIST1H2BKO60814 126 aa1.18□□□□□ -2.22
SNHG1-202ENST00000535689 TRACP01848 142 aa1.18□□□□□ -2.22
SNHG1-202ENST00000535689 HIST1H2BJP06899 126 aa1.18□□□□□ -2.22
SNHG1-202ENST00000535689 FABP2P12104 132 aa1.18□□□□□ -2.22
SNHG1-202ENST00000535689 PDE6GP18545 87 aa1.18□□□□□ -2.22
SNHG1-202ENST00000535689 LINC01545Q5VT33 79 aa1.18□□□□□ -2.22
SNHG1-202ENST00000535689 TMEM254Q8TBM7 123 aa1.18□□□□□ -2.22
SNHG1-202ENST00000535689 LINC00472Q9H8W2 130 aa1.18□□□□□ -2.22
SNHG1-202ENST00000535689 TMEM218A2RU14 115 aa1.17□□□□□ -2.22
SNHG1-202ENST00000535689 FABP4P15090 132 aa1.17□□□□□ -2.22
SNHG1-202ENST00000535689 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
SNHG1-202ENST00000535689 S4R3F8 94 aa1.17□□□□□ -2.22
SNHG1-202ENST00000535689 CCKP06307 115 aa1.16□□□□□ -2.22
SNHG1-202ENST00000535689 SNURFQ9Y675 71 aa1.16□□□□□ -2.22
SNHG1-202ENST00000535689 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.22
SNHG1-202ENST00000535689 DNAL4O96015 105 aa1.15□□□□□ -2.23
SNHG1-202ENST00000535689 PMCHL2Q9BQD1 86 aa1.15□□□□□ -2.23
SNHG1-202ENST00000535689 SYS1-DBNDD2H3BUS1 97 aa1.14□□□□□ -2.23
SNHG1-202ENST00000535689 RBM3P98179 157 aaKnown RBP1.14□□□□□ -2.23
SNHG1-202ENST00000535689 MRPL34Q9BQ48 92 aaKnown RBP1.14□□□□□ -2.23
SNHG1-202ENST00000535689 ORMDL1Q9P0S3 153 aa1.14□□□□□ -2.23
SNHG1-202ENST00000535689 hDV103S1A0JD37 113 aa1.13□□□□□ -2.23
SNHG1-202ENST00000535689 COX6CP09669 75 aa1.13□□□□□ -2.23
SNHG1-202ENST00000535689 SCGB1A1P11684 91 aa1.13□□□□□ -2.23
SNHG1-202ENST00000535689 CLLU1Q5K131 121 aa1.13□□□□□ -2.23
SNHG1-202ENST00000535689 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
SNHG1-202ENST00000535689 SVBPQ8N300 66 aa1.13□□□□□ -2.23
SNHG1-202ENST00000535689 C9JAW5 83 aa1.12□□□□□ -2.23
SNHG1-202ENST00000535689 ROMO1P60602 79 aa1.12□□□□□ -2.23
SNHG1-202ENST00000535689 VPS25Q9BRG1 176 aa1.12□□□□□ -2.23
SNHG1-202ENST00000535689 H0YAA0 97 aa1.11□□□□□ -2.23
SNHG1-202ENST00000535689 C20orf197Q8N268 126 aa1.11□□□□□ -2.23
SNHG1-202ENST00000535689 K7ERJ3 54 aa1.1□□□□□ -2.23
SNHG1-202ENST00000535689 NDUFC1O43677 76 aa1.1□□□□□ -2.23
SNHG1-202ENST00000535689 APOC3P02656 99 aa1.1□□□□□ -2.23
SNHG1-202ENST00000535689 MT4P47944 62 aa1.1□□□□□ -2.23
SNHG1-202ENST00000535689 RPS28P62857 69 aaKnown RBP1.1□□□□□ -2.23
SNHG1-202ENST00000535689 MT1XP80297 61 aa1.1□□□□□ -2.23
SNHG1-202ENST00000535689 NREPQ16612 68 aa1.1□□□□□ -2.23
SNHG1-202ENST00000535689 HCG22E2RYF7 251 aa1.09□□□□□ -2.23
SNHG1-202ENST00000535689 JMJD7-PLA2G4BH0Y9G9 81 aa1.09□□□□□ -2.23
SNHG1-202ENST00000535689 KRTDAPP60985 99 aa1.09□□□□□ -2.23
SNHG1-202ENST00000535689 PRO1854Q9UHT4 67 aa1.08□□□□□ -2.24
SNHG1-202ENST00000535689 LOC110117498A0A087WWA1 95 aa1.07□□□□□ -2.24
SNHG1-202ENST00000535689 MT1GP13640 62 aa1.07□□□□□ -2.24
SNHG1-202ENST00000535689 COX7CP15954 63 aa1.07□□□□□ -2.24
SNHG1-202ENST00000535689 HMCN1Q96RW7 5635 aa1.07□□□□□ -2.24
SNHG1-202ENST00000535689 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
SNHG1-202ENST00000535689 MMP24-AS1A0A0U1RRL7 71 aa1.06□□□□□ -2.24
SNHG1-202ENST00000535689 INE1O15225 51 aa1.06□□□□□ -2.24
SNHG1-202ENST00000535689 CASC2Q6XLA1 102 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms