RNA–Protein interactions for RNA: ENST00000535603.5

IFRD1-216, Transcript of interferon related developmental regulator 1, humanhuman

TSL 2 BASIC

Gene IFRD1, Length 3,397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-216ENST00000535603 A0A096LNI7 61 aa3.64□□□□□ -1.83
IFRD1-216ENST00000535603 KRTAP13-1Q8IUC0 172 aa3.63□□□□□ -1.83
IFRD1-216ENST00000535603 Q6ZRX8 168 aa3.62□□□□□ -1.83
IFRD1-216ENST00000535603 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
IFRD1-216ENST00000535603 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
IFRD1-216ENST00000535603 SPRR1BP22528 89 aa3.62□□□□□ -1.83
IFRD1-216ENST00000535603 KRTAP29-1A8MX34 341 aaPredicted RBP3.61□□□□□ -1.83
IFRD1-216ENST00000535603 DMBT1Q9UGM3 2413 aaPredicted RBP3.61□□□□□ -1.83
IFRD1-216ENST00000535603 IGKV2-24A0A0C4DH68 120 aa3.6□□□□□ -1.83
IFRD1-216ENST00000535603 DNAH5Q8TE73 4624 aa3.6□□□□□ -1.83
IFRD1-216ENST00000535603 IGLV5-48A0A075B6I7 105 aa3.6□□□□□ -1.83
IFRD1-216ENST00000535603 MYCBP2O75592 4640 aa3.59□□□□□ -1.83
IFRD1-216ENST00000535603 KRTAP10-2P60368 255 aa3.59□□□□□ -1.84
IFRD1-216ENST00000535603 APOBP04114 4563 aaKnown RBP3.57□□□□□ -1.84
IFRD1-216ENST00000535603 KRTAP10-1P60331 282 aa3.57□□□□□ -1.84
IFRD1-216ENST00000535603 DEFB105AQ8NG35 78 aa3.57□□□□□ -1.84
IFRD1-216ENST00000535603 IGFL1Q6UW32 110 aa3.56□□□□□ -1.84
IFRD1-216ENST00000535603 H0YAA0 97 aa3.55□□□□□ -1.84
IFRD1-216ENST00000535603 KRTAP10-4P60372 401 aaPredicted RBP3.55□□□□□ -1.84
IFRD1-216ENST00000535603 LRP1BQ9NZR2 4599 aa3.53□□□□□ -1.84
IFRD1-216ENST00000535603 SPINK6Q6UWN8 80 aa3.52□□□□□ -1.85
IFRD1-216ENST00000535603 SRRM2Q9UQ35 2752 aaKnown RBP3.52□□□□□ -1.85
IFRD1-216ENST00000535603 RPS29P62273 56 aaKnown RBP3.51□□□□□ -1.85
IFRD1-216ENST00000535603 PRLHP81277 87 aa3.49□□□□□ -1.85
IFRD1-216ENST00000535603 PLAC4Q8WY50 150 aa3.49□□□□□ -1.85
IFRD1-216ENST00000535603 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
IFRD1-216ENST00000535603 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
IFRD1-216ENST00000535603 TP53AIP1Q9HCN2 124 aa3.48□□□□□ -1.85
IFRD1-216ENST00000535603 Q5VSD8 79 aa3.46□□□□□ -1.85
IFRD1-216ENST00000535603 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
IFRD1-216ENST00000535603 MRPL34Q9BQ48 92 aaKnown RBP3.44□□□□□ -1.86
IFRD1-216ENST00000535603 MMP24-AS1A0A0U1RRL7 71 aa3.42□□□□□ -1.86
IFRD1-216ENST00000535603 CRCT1Q9UGL9 99 aa3.42□□□□□ -1.86
IFRD1-216ENST00000535603 MUC2Q02817 5179 aa3.42□□□□□ -1.86
IFRD1-216ENST00000535603 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
IFRD1-216ENST00000535603 FAT1Q14517 4588 aa3.39□□□□□ -1.87
IFRD1-216ENST00000535603 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
IFRD1-216ENST00000535603 FAT3Q8TDW7 4589 aa3.38□□□□□ -1.87
IFRD1-216ENST00000535603 SPINK1P00995 79 aa3.37□□□□□ -1.87
IFRD1-216ENST00000535603 ANAPC11Q9NYG5 84 aa3.37□□□□□ -1.87
IFRD1-216ENST00000535603 TNXBP22105 4242 aa3.36□□□□□ -1.87
IFRD1-216ENST00000535603 INE1O15225 51 aa3.35□□□□□ -1.87
IFRD1-216ENST00000535603 IGKV2-30P06310 120 aa3.33□□□□□ -1.88
IFRD1-216ENST00000535603 H1FX-AS1Q4G0G2 97 aa3.33□□□□□ -1.88
IFRD1-216ENST00000535603 MT1HL1P0DM35 61 aa3.32□□□□□ -1.88
IFRD1-216ENST00000535603 XP32Q5T750 250 aa3.32□□□□□ -1.88
IFRD1-216ENST00000535603 SMR3BP02814 79 aaPredicted RBP3.32□□□□□ -1.88
IFRD1-216ENST00000535603 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
IFRD1-216ENST00000535603 RPL37P61927 97 aaKnown RBP3.28□□□□□ -1.88
IFRD1-216ENST00000535603 IGKV2D-30A0A075B6S6 120 aa3.27□□□□□ -1.89
IFRD1-216ENST00000535603 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
IFRD1-216ENST00000535603 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
IFRD1-216ENST00000535603 LRP2P98164 4655 aa3.27□□□□□ -1.89
IFRD1-216ENST00000535603 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
IFRD1-216ENST00000535603 LRP1Q07954 4544 aaKnown RBP3.22□□□□□ -1.89
IFRD1-216ENST00000535603 A0A0D9SG42 100 aa3.21□□□□□ -1.89
IFRD1-216ENST00000535603 MUC17Q685J3 4493 aa3.21□□□□□ -1.89
IFRD1-216ENST00000535603 KRTAP13-3Q3SY46 172 aa3.2□□□□□ -1.9
IFRD1-216ENST00000535603 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
IFRD1-216ENST00000535603 COX6B2Q6YFQ2 88 aa3.18□□□□□ -1.9
IFRD1-216ENST00000535603 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
IFRD1-216ENST00000535603 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
IFRD1-216ENST00000535603 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
IFRD1-216ENST00000535603 S4R3F8 94 aa3.1□□□□□ -1.91
IFRD1-216ENST00000535603 C9orf92A6NGG3 77 aa3.08□□□□□ -1.92
IFRD1-216ENST00000535603 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
IFRD1-216ENST00000535603 KRTAP19-1Q8IUB9 90 aa3.06□□□□□ -1.92
IFRD1-216ENST00000535603 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
IFRD1-216ENST00000535603 KRTAP13-4Q3LI77 160 aa3.02□□□□□ -1.93
IFRD1-216ENST00000535603 LPAP08519 4548 aa3□□□□□ -1.93
IFRD1-216ENST00000535603 FSIP2Q5CZC0 6907 aa2.99□□□□□ -1.93
IFRD1-216ENST00000535603 KRTAP19-2Q3LHN2 52 aa2.97□□□□□ -1.93
IFRD1-216ENST00000535603 KRTAP10-6P60371 365 aaPredicted RBP2.97□□□□□ -1.93
IFRD1-216ENST00000535603 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
IFRD1-216ENST00000535603 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
IFRD1-216ENST00000535603 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
IFRD1-216ENST00000535603 KRTAP4-1Q9BYQ7 146 aa2.91□□□□□ -1.94
IFRD1-216ENST00000535603 KRTAP4-8Q9BYQ9 185 aa2.91□□□□□ -1.94
IFRD1-216ENST00000535603 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
IFRD1-216ENST00000535603 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
IFRD1-216ENST00000535603 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
IFRD1-216ENST00000535603 KRTAP9-3Q9BYQ3 159 aa2.87□□□□□ -1.95
IFRD1-216ENST00000535603 LCE3BQ5TA77 95 aa2.83□□□□□ -1.96
IFRD1-216ENST00000535603 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
IFRD1-216ENST00000535603 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
IFRD1-216ENST00000535603 NEBP20929 6669 aa2.81□□□□□ -1.96
IFRD1-216ENST00000535603 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
IFRD1-216ENST00000535603 USH2AO75445 5202 aa2.81□□□□□ -1.96
IFRD1-216ENST00000535603 MT1HP80294 61 aa2.8□□□□□ -1.96
IFRD1-216ENST00000535603 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
IFRD1-216ENST00000535603 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
IFRD1-216ENST00000535603 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
IFRD1-216ENST00000535603 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
IFRD1-216ENST00000535603 LCE1AQ5T7P2 110 aa2.72□□□□□ -1.97
IFRD1-216ENST00000535603 M0QZ58 72 aa2.72□□□□□ -1.97
IFRD1-216ENST00000535603 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
IFRD1-216ENST00000535603 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
IFRD1-216ENST00000535603 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
IFRD1-216ENST00000535603 KRTAP9-8Q9BYQ0 159 aa2.7□□□□□ -1.98
IFRD1-216ENST00000535603 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms