RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 RPS28P62857 69 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-206ENST00000535565 SPTSSBQ8NFR3 76 aa11.26□□□□□ -0.61
RBFOX1-206ENST00000535565 LCE2CQ5TA81 110 aa11.24□□□□□ -0.61
RBFOX1-206ENST00000535565 KRTAP3-3Q9BYR6 98 aa11.2□□□□□ -0.62
RBFOX1-206ENST00000535565 FLGP20930 4061 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-206ENST00000535565 CSAG1Q6PB30 78 aa11.14□□□□□ -0.63
RBFOX1-206ENST00000535565 SMIM26A0A096LP01 95 aa11.1□□□□□ -0.63
RBFOX1-206ENST00000535565 MT1HP80294 61 aa11.07□□□□□ -0.64
RBFOX1-206ENST00000535565 FAT4Q6V0I7 4981 aa11.02□□□□□ -0.64
RBFOX1-206ENST00000535565 M0R2T5 61 aa11.02□□□□□ -0.65
RBFOX1-206ENST00000535565 V9GYY9 64 aa10.96□□□□□ -0.65
RBFOX1-206ENST00000535565 Q1T7F1 81 aa10.93□□□□□ -0.66
RBFOX1-206ENST00000535565 LINC01558Q9Y6Z2 57 aa10.93□□□□□ -0.66
RBFOX1-206ENST00000535565 SEC61GP60059 68 aa10.9□□□□□ -0.66
RBFOX1-206ENST00000535565 A0A1B0GU69 56 aa10.87□□□□□ -0.67
RBFOX1-206ENST00000535565 H0YAA0 97 aa10.86□□□□□ -0.67
RBFOX1-206ENST00000535565 PRR15LQ9BU68 103 aa10.84□□□□□ -0.67
RBFOX1-206ENST00000535565 ADM2Q7Z4H4 148 aa10.82□□□□□ -0.68
RBFOX1-206ENST00000535565 LCE2AQ5TA79 106 aaPredicted RBP10.77□□□□□ -0.68
RBFOX1-206ENST00000535565 PSPHP1O15172 72 aa10.74□□□□□ -0.69
RBFOX1-206ENST00000535565 KRTAP3-2Q9BYR7 98 aa10.73□□□□□ -0.69
RBFOX1-206ENST00000535565 KRTAP10-6P60371 365 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-206ENST00000535565 P0C880 135 aa10.69□□□□□ -0.7
RBFOX1-206ENST00000535565 LORP23490 312 aaPredicted RBP10.63□□□□□ -0.71
RBFOX1-206ENST00000535565 Q5VV11 94 aa10.63□□□□□ -0.71
RBFOX1-206ENST00000535565 KRTAP9-8Q9BYQ0 159 aa10.61□□□□□ -0.71
RBFOX1-206ENST00000535565 A0A1B0GU33 70 aa10.59□□□□□ -0.71
RBFOX1-206ENST00000535565 MT2AP02795 61 aa10.57□□□□□ -0.72
RBFOX1-206ENST00000535565 KRTAP10-10P60014 251 aa10.52□□□□□ -0.72
RBFOX1-206ENST00000535565 UQCR11O14957 56 aa10.5□□□□□ -0.73
RBFOX1-206ENST00000535565 MT1FP04733 61 aa10.5□□□□□ -0.73
RBFOX1-206ENST00000535565 CRIPTQ9P021 101 aa10.49□□□□□ -0.73
RBFOX1-206ENST00000535565 R4GN34 69 aa10.48□□□□□ -0.73
RBFOX1-206ENST00000535565 A6NED7 52 aa10.45□□□□□ -0.74
RBFOX1-206ENST00000535565 M0QZ58 72 aa10.45□□□□□ -0.74
RBFOX1-206ENST00000535565 SPATA8Q6RVD6 105 aa10.39□□□□□ -0.75
RBFOX1-206ENST00000535565 KRTAP13-4Q3LI77 160 aa10.38□□□□□ -0.75
RBFOX1-206ENST00000535565 MIR22HGQ0VDD5 57 aa10.35□□□□□ -0.75
RBFOX1-206ENST00000535565 SPRR2GQ9BYE4 73 aa10.27□□□□□ -0.76
RBFOX1-206ENST00000535565 LINC01554Q52M75 96 aa10.25□□□□□ -0.77
RBFOX1-206ENST00000535565 KRTAP9-3Q9BYQ3 159 aa10.24□□□□□ -0.77
RBFOX1-206ENST00000535565 KRTAP19-1Q8IUB9 90 aa10.23□□□□□ -0.77
RBFOX1-206ENST00000535565 A0A0D9SG42 100 aa10.22□□□□□ -0.77
RBFOX1-206ENST00000535565 CDC42SE1Q9NRR8 79 aa10.22□□□□□ -0.77
RBFOX1-206ENST00000535565 A8MU10 97 aa10.2□□□□□ -0.78
RBFOX1-206ENST00000535565 BRK1Q8WUW1 75 aa10.16□□□□□ -0.78
RBFOX1-206ENST00000535565 A6NN06 94 aa10.07□□□□□ -0.8
RBFOX1-206ENST00000535565 KRTAP19-8Q3LI54 63 aa10.03□□□□□ -0.8
RBFOX1-206ENST00000535565 SPINT4Q6UDR6 99 aa10.01□□□□□ -0.81
RBFOX1-206ENST00000535565 KRTAP12-1P59990 96 aa10□□□□□ -0.81
RBFOX1-206ENST00000535565 K7ERS5 55 aa9.98□□□□□ -0.81
RBFOX1-206ENST00000535565 LCE2BO14633 110 aa9.98□□□□□ -0.81
RBFOX1-206ENST00000535565 KRTAP12-2P59991 146 aa9.96□□□□□ -0.82
RBFOX1-206ENST00000535565 KRTAP9-2Q9BYQ4 174 aa9.96□□□□□ -0.82
RBFOX1-206ENST00000535565 PLAC4Q8WY50 150 aa9.94□□□□□ -0.82
RBFOX1-206ENST00000535565 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.82
RBFOX1-206ENST00000535565 MT1BP07438 61 aa9.88□□□□□ -0.83
RBFOX1-206ENST00000535565 PRO0628Q9UI54 55 aa9.81□□□□□ -0.84
RBFOX1-206ENST00000535565 CAMK2N1Q7Z7J9 78 aa9.8□□□□□ -0.84
RBFOX1-206ENST00000535565 USH2AO75445 5202 aa9.69□□□□□ -0.86
RBFOX1-206ENST00000535565 FSIP2Q5CZC0 6907 aa9.64□□□□□ -0.87
RBFOX1-206ENST00000535565 PMAIP1Q13794 54 aa9.6□□□□□ -0.87
RBFOX1-206ENST00000535565 PRO2289Q9P1D8 64 aa9.55□□□□□ -0.88
RBFOX1-206ENST00000535565 MT1XP80297 61 aa9.52□□□□□ -0.89
RBFOX1-206ENST00000535565 KRTAP10-5P60370 271 aa9.5□□□□□ -0.89
RBFOX1-206ENST00000535565 KRTAP9-6A0A140TA67 174 aa9.49□□□□□ -0.89
RBFOX1-206ENST00000535565 ROMO1P60602 79 aa9.47□□□□□ -0.89
RBFOX1-206ENST00000535565 CRCT1Q9UGL9 99 aa9.46□□□□□ -0.89
RBFOX1-206ENST00000535565 KRTAP19-6Q3LI70 58 aa9.46□□□□□ -0.9
RBFOX1-206ENST00000535565 C10orf95Q9H7T3 257 aa9.46□□□□□ -0.9
RBFOX1-206ENST00000535565 SSPOA2VEC9 5147 aa9.4□□□□□ -0.91
RBFOX1-206ENST00000535565 TNP1P09430 55 aa9.28□□□□□ -0.92
RBFOX1-206ENST00000535565 KRTAP25-1Q3LHN0 102 aa9.24□□□□□ -0.93
RBFOX1-206ENST00000535565 KRTAP10-7P60409 375 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-206ENST00000535565 KTN1-AS1Q86SY8 53 aa9.12□□□□□ -0.95
RBFOX1-206ENST00000535565 FCGBPQ9Y6R7 5405 aaPredicted RBP9.07□□□□□ -0.96
RBFOX1-206ENST00000535565 KRTAP10-12P60413 245 aa9.05□□□□□ -0.96
RBFOX1-206ENST00000535565 PRAC1Q96KF2 57 aa8.96□□□□□ -0.97
RBFOX1-206ENST00000535565 KRTAP23-1A1A580 65 aa8.92□□□□□ -0.98
RBFOX1-206ENST00000535565 PP632Q6XCG6 107 aa8.9□□□□□ -0.99
RBFOX1-206ENST00000535565 LCE3AQ5TA76 89 aa8.87□□□□□ -0.99
RBFOX1-206ENST00000535565 KRTAP4-8A0A0G2JLE6 195 aa8.81□□□□□ -1
RBFOX1-206ENST00000535565 SVIPQ8NHG7 77 aa8.81□□□□□ -1
RBFOX1-206ENST00000535565 KRTAP4-8Q9BYQ9 185 aa8.81□□□□□ -1
RBFOX1-206ENST00000535565 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.79□□□□□ -1
RBFOX1-206ENST00000535565 KMT2DO14686 5537 aa8.73□□□□□ -1.01
RBFOX1-206ENST00000535565 MACF1Q9UPN3 7388 aaKnown RBP8.69□□□□□ -1.02
RBFOX1-206ENST00000535565 KRTAP8-1Q8IUC2 63 aa8.69□□□□□ -1.02
RBFOX1-206ENST00000535565 SYNE2Q8WXH0 6885 aaKnown RBP8.59□□□□□ -1.03
RBFOX1-206ENST00000535565 KRTAP9-7A8MTY7 169 aa8.57□□□□□ -1.04
RBFOX1-206ENST00000535565 KRTAP19-5Q3LI72 72 aa8.56□□□□□ -1.04
RBFOX1-206ENST00000535565 KRTAP12-3P60328 96 aa8.55□□□□□ -1.04
RBFOX1-206ENST00000535565 KRTAP19-7Q3SYF9 63 aa8.49□□□□□ -1.05
RBFOX1-206ENST00000535565 SPRR2FQ96RM1 72 aa8.39□□□□□ -1.07
RBFOX1-206ENST00000535565 MT1EP04732 61 aa8.37□□□□□ -1.07
RBFOX1-206ENST00000535565 KRTAP5-9P26371 169 aa8.35□□□□□ -1.07
RBFOX1-206ENST00000535565 KRTAP6-3Q3LI67 103 aa8.32□□□□□ -1.08
RBFOX1-206ENST00000535565 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
RBFOX1-206ENST00000535565 MT1LQ93083 61 aa8.18□□□□□ -1.1
RBFOX1-206ENST00000535565 MUC12Q9UKN1 5478 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms