RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 LIMD2Q9BT23 127 aa3.35□□□□□ -1.87
TNFRSF1A-206ENST00000535038 A8MUN3 132 aa3.34□□□□□ -1.87
TNFRSF1A-206ENST00000535038 KRTAP21-3Q3LHN1 58 aa3.34□□□□□ -1.87
TNFRSF1A-206ENST00000535038 HRES1P13985 223 aa3.33□□□□□ -1.88
TNFRSF1A-206ENST00000535038 PCOTHQ58A44 107 aa3.33□□□□□ -1.88
TNFRSF1A-206ENST00000535038 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
TNFRSF1A-206ENST00000535038 LINC01558Q9Y6Z2 57 aa3.33□□□□□ -1.88
TNFRSF1A-206ENST00000535038 PKHD1P08F94 4074 aa3.33□□□□□ -1.88
TNFRSF1A-206ENST00000535038 PSPHP1O15172 72 aa3.32□□□□□ -1.88
TNFRSF1A-206ENST00000535038 Q75L30 129 aa3.32□□□□□ -1.88
TNFRSF1A-206ENST00000535038 FAT1Q14517 4588 aa3.31□□□□□ -1.88
TNFRSF1A-206ENST00000535038 NDUFS5O43920 106 aa3.31□□□□□ -1.88
TNFRSF1A-206ENST00000535038 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
TNFRSF1A-206ENST00000535038 SPINK6Q6UWN8 80 aa3.31□□□□□ -1.88
TNFRSF1A-206ENST00000535038 LINC00313P59037 77 aa3.3□□□□□ -1.88
TNFRSF1A-206ENST00000535038 RYR2Q92736 4967 aa3.3□□□□□ -1.88
TNFRSF1A-206ENST00000535038 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
TNFRSF1A-206ENST00000535038 TNXBP22105 4242 aa3.29□□□□□ -1.88
TNFRSF1A-206ENST00000535038 HSPG2P98160 4391 aa3.28□□□□□ -1.88
TNFRSF1A-206ENST00000535038 A8MU10 97 aa3.28□□□□□ -1.88
TNFRSF1A-206ENST00000535038 RPS29P62273 56 aaKnown RBP3.28□□□□□ -1.88
TNFRSF1A-206ENST00000535038 PRR15LQ9BU68 103 aa3.28□□□□□ -1.88
TNFRSF1A-206ENST00000535038 KRTAP10-4P60372 401 aaPredicted RBP3.27□□□□□ -1.89
TNFRSF1A-206ENST00000535038 FAT3Q8TDW7 4589 aa3.26□□□□□ -1.89
TNFRSF1A-206ENST00000535038 SPINK1P00995 79 aa3.26□□□□□ -1.89
TNFRSF1A-206ENST00000535038 LCA10Q71F78 164 aa3.26□□□□□ -1.89
TNFRSF1A-206ENST00000535038 CHKB-CPT1BH3BT56 60 aa3.25□□□□□ -1.89
TNFRSF1A-206ENST00000535038 ACYP2P14621 99 aa3.24□□□□□ -1.89
TNFRSF1A-206ENST00000535038 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
TNFRSF1A-206ENST00000535038 SPAG11AQ6PDA7 123 aa3.24□□□□□ -1.89
TNFRSF1A-206ENST00000535038 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
TNFRSF1A-206ENST00000535038 TYMSOSQ8TAI1 123 aa3.23□□□□□ -1.89
TNFRSF1A-206ENST00000535038 ATP11AUNQ6ZP68 121 aa3.22□□□□□ -1.89
TNFRSF1A-206ENST00000535038 A6NN06 94 aa3.21□□□□□ -1.9
TNFRSF1A-206ENST00000535038 SPINK7P58062 85 aa3.21□□□□□ -1.9
TNFRSF1A-206ENST00000535038 LINC00304Q8N9R0 145 aa3.21□□□□□ -1.9
TNFRSF1A-206ENST00000535038 A6NED7 52 aa3.2□□□□□ -1.9
TNFRSF1A-206ENST00000535038 A8MUU9 505 aa3.2□□□□□ -1.9
TNFRSF1A-206ENST00000535038 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
TNFRSF1A-206ENST00000535038 RETNLBQ9BQ08 111 aa3.2□□□□□ -1.9
TNFRSF1A-206ENST00000535038 C20orf166-AS1Q96NR2 134 aa3.19□□□□□ -1.9
TNFRSF1A-206ENST00000535038 LRP1Q07954 4544 aaKnown RBP3.19□□□□□ -1.9
TNFRSF1A-206ENST00000535038 PMAIP1Q13794 54 aa3.18□□□□□ -1.9
TNFRSF1A-206ENST00000535038 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
TNFRSF1A-206ENST00000535038 RYR1P21817 5038 aa3.17□□□□□ -1.9
TNFRSF1A-206ENST00000535038 FLG2Q5D862 2391 aaPredicted RBP3.16□□□□□ -1.9
TNFRSF1A-206ENST00000535038 SPATA8Q6RVD6 105 aa3.16□□□□□ -1.9
TNFRSF1A-206ENST00000535038 C7orf65Q6ZTY9 151 aa3.16□□□□□ -1.9
TNFRSF1A-206ENST00000535038 KMT2CQ8NEZ4 4911 aaKnown RBP3.15□□□□□ -1.9
TNFRSF1A-206ENST00000535038 SMR3BP02814 79 aaPredicted RBP3.14□□□□□ -1.91
TNFRSF1A-206ENST00000535038 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
TNFRSF1A-206ENST00000535038 A0A1B0GU69 56 aa3.12□□□□□ -1.91
TNFRSF1A-206ENST00000535038 SPTSSBQ8NFR3 76 aa3.12□□□□□ -1.91
TNFRSF1A-206ENST00000535038 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
TNFRSF1A-206ENST00000535038 RYR3Q15413 4870 aa3.09□□□□□ -1.92
TNFRSF1A-206ENST00000535038 C9orf92A6NGG3 77 aa3.08□□□□□ -1.92
TNFRSF1A-206ENST00000535038 UQCR11O14957 56 aa3.08□□□□□ -1.92
TNFRSF1A-206ENST00000535038 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
TNFRSF1A-206ENST00000535038 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
TNFRSF1A-206ENST00000535038 COX6B2Q6YFQ2 88 aa3.06□□□□□ -1.92
TNFRSF1A-206ENST00000535038 SEC61GP60059 68 aa3.05□□□□□ -1.92
TNFRSF1A-206ENST00000535038 RBM12B-AS1Q9P1G2 102 aa3.04□□□□□ -1.92
TNFRSF1A-206ENST00000535038 H0YAA0 97 aa3.03□□□□□ -1.92
TNFRSF1A-206ENST00000535038 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
TNFRSF1A-206ENST00000535038 MT1HL1P0DM35 61 aa3.02□□□□□ -1.93
TNFRSF1A-206ENST00000535038 H1FX-AS1Q4G0G2 97 aa3.01□□□□□ -1.93
TNFRSF1A-206ENST00000535038 Q5VSD8 79 aa3.01□□□□□ -1.93
TNFRSF1A-206ENST00000535038 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
TNFRSF1A-206ENST00000535038 ADM2Q7Z4H4 148 aa2.99□□□□□ -1.93
TNFRSF1A-206ENST00000535038 MUC17Q685J3 4493 aa2.99□□□□□ -1.93
TNFRSF1A-206ENST00000535038 A0A1B0GU33 70 aa2.98□□□□□ -1.93
TNFRSF1A-206ENST00000535038 DMBT1Q9UGM3 2413 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-206ENST00000535038 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.94
TNFRSF1A-206ENST00000535038 LRP2P98164 4655 aa2.94□□□□□ -1.94
TNFRSF1A-206ENST00000535038 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
TNFRSF1A-206ENST00000535038 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
TNFRSF1A-206ENST00000535038 LPAP08519 4548 aa2.93□□□□□ -1.94
TNFRSF1A-206ENST00000535038 KRTAP13-4Q3LI77 160 aa2.92□□□□□ -1.94
TNFRSF1A-206ENST00000535038 TPRXLQ17RH7 258 aa2.91□□□□□ -1.94
TNFRSF1A-206ENST00000535038 S4R3F8 94 aa2.91□□□□□ -1.94
TNFRSF1A-206ENST00000535038 CSAG1Q6PB30 78 aa2.89□□□□□ -1.95
TNFRSF1A-206ENST00000535038 LINC01554Q52M75 96 aa2.88□□□□□ -1.95
TNFRSF1A-206ENST00000535038 P0C880 135 aa2.87□□□□□ -1.95
TNFRSF1A-206ENST00000535038 ABCA13Q86UQ4 5058 aa2.87□□□□□ -1.95
TNFRSF1A-206ENST00000535038 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
TNFRSF1A-206ENST00000535038 HERC2O95714 4834 aa2.85□□□□□ -1.95
TNFRSF1A-206ENST00000535038 HERC1Q15751 4861 aa2.84□□□□□ -1.95
TNFRSF1A-206ENST00000535038 BIRC6Q9NR09 4857 aa2.84□□□□□ -1.95
TNFRSF1A-206ENST00000535038 ROMO1P60602 79 aa2.83□□□□□ -1.96
TNFRSF1A-206ENST00000535038 K7ERS5 55 aa2.82□□□□□ -1.96
TNFRSF1A-206ENST00000535038 KRTAP19-2Q3LHN2 52 aa2.82□□□□□ -1.96
TNFRSF1A-206ENST00000535038 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
TNFRSF1A-206ENST00000535038 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
TNFRSF1A-206ENST00000535038 KRTAP4-1Q9BYQ7 146 aa2.8□□□□□ -1.96
TNFRSF1A-206ENST00000535038 M0QZ58 72 aa2.79□□□□□ -1.96
TNFRSF1A-206ENST00000535038 A0A0D9SG42 100 aa2.78□□□□□ -1.96
TNFRSF1A-206ENST00000535038 CRIPTQ9P021 101 aa2.73□□□□□ -1.97
TNFRSF1A-206ENST00000535038 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
TNFRSF1A-206ENST00000535038 PCLOQ9Y6V0 5065 aa2.71□□□□□ -1.98
TNFRSF1A-206ENST00000535038 C10orf95Q9H7T3 257 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms