RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SEC61GP60059 68 aa6.87□□□□□ -1.31
BEST1-208ENST00000534553 LRP2P98164 4655 aa6.86□□□□□ -1.31
BEST1-208ENST00000534553 RBM12B-AS1Q9P1G2 102 aa6.84□□□□□ -1.31
BEST1-208ENST00000534553 LPAP08519 4548 aa6.83□□□□□ -1.32
BEST1-208ENST00000534553 CDC42SE1Q9NRR8 79 aa6.82□□□□□ -1.32
BEST1-208ENST00000534553 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
BEST1-208ENST00000534553 UQCR11O14957 56 aa6.78□□□□□ -1.32
BEST1-208ENST00000534553 S4R3F8 94 aa6.78□□□□□ -1.32
BEST1-208ENST00000534553 PCLOQ9Y6V0 5065 aa6.76□□□□□ -1.33
BEST1-208ENST00000534553 LCA10Q71F78 164 aa6.75□□□□□ -1.33
BEST1-208ENST00000534553 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
BEST1-208ENST00000534553 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
BEST1-208ENST00000534553 SPATA8Q6RVD6 105 aa6.7□□□□□ -1.34
BEST1-208ENST00000534553 MIR22HGQ0VDD5 57 aa6.69□□□□□ -1.34
BEST1-208ENST00000534553 A8MU10 97 aa6.65□□□□□ -1.34
BEST1-208ENST00000534553 A0A1B0GU33 70 aa6.64□□□□□ -1.35
BEST1-208ENST00000534553 CSAG1Q6PB30 78 aa6.64□□□□□ -1.35
BEST1-208ENST00000534553 HMCN2Q8NDA2 5059 aa6.61□□□□□ -1.35
BEST1-208ENST00000534553 HERC1Q15751 4861 aa6.59□□□□□ -1.35
BEST1-208ENST00000534553 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
BEST1-208ENST00000534553 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
BEST1-208ENST00000534553 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
BEST1-208ENST00000534553 H0YAA0 97 aa6.55□□□□□ -1.36
BEST1-208ENST00000534553 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
BEST1-208ENST00000534553 A6NN06 94 aa6.5□□□□□ -1.37
BEST1-208ENST00000534553 ADM2Q7Z4H4 148 aa6.48□□□□□ -1.37
BEST1-208ENST00000534553 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
BEST1-208ENST00000534553 P0C880 135 aa6.44□□□□□ -1.38
BEST1-208ENST00000534553 K7ERS5 55 aa6.43□□□□□ -1.38
BEST1-208ENST00000534553 M0QZ58 72 aa6.41□□□□□ -1.38
BEST1-208ENST00000534553 FLGP20930 4061 aaPredicted RBP6.41□□□□□ -1.38
BEST1-208ENST00000534553 KTN1-AS1Q86SY8 53 aa6.4□□□□□ -1.38
BEST1-208ENST00000534553 MUC2Q02817 5179 aa6.38□□□□□ -1.39
BEST1-208ENST00000534553 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
BEST1-208ENST00000534553 R4GN34 69 aa6.29□□□□□ -1.4
BEST1-208ENST00000534553 A0A0D9SG42 100 aa6.28□□□□□ -1.4
BEST1-208ENST00000534553 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
BEST1-208ENST00000534553 UBR4Q5T4S7 5183 aa6.24□□□□□ -1.41
BEST1-208ENST00000534553 LCE2CQ5TA81 110 aa6.23□□□□□ -1.41
BEST1-208ENST00000534553 CRIPTQ9P021 101 aa6.22□□□□□ -1.41
BEST1-208ENST00000534553 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
BEST1-208ENST00000534553 KRTAP12-2P59991 146 aa6.15□□□□□ -1.43
BEST1-208ENST00000534553 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.43
BEST1-208ENST00000534553 ROMO1P60602 79 aa6.13□□□□□ -1.43
BEST1-208ENST00000534553 M0R2T5 61 aa6.12□□□□□ -1.43
BEST1-208ENST00000534553 MT1HP80294 61 aa6.12□□□□□ -1.43
BEST1-208ENST00000534553 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
BEST1-208ENST00000534553 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
BEST1-208ENST00000534553 FAT4Q6V0I7 4981 aa6.11□□□□□ -1.43
BEST1-208ENST00000534553 PRAC1Q96KF2 57 aa6.06□□□□□ -1.44
BEST1-208ENST00000534553 KRTAP25-1Q3LHN0 102 aa5.96□□□□□ -1.46
BEST1-208ENST00000534553 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.46
BEST1-208ENST00000534553 MT2AP02795 61 aa5.92□□□□□ -1.46
BEST1-208ENST00000534553 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
BEST1-208ENST00000534553 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
BEST1-208ENST00000534553 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
BEST1-208ENST00000534553 MT1FP04733 61 aa5.88□□□□□ -1.47
BEST1-208ENST00000534553 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
BEST1-208ENST00000534553 PLAC4Q8WY50 150 aa5.83□□□□□ -1.48
BEST1-208ENST00000534553 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
BEST1-208ENST00000534553 LCE2AQ5TA79 106 aaPredicted RBP5.78□□□□□ -1.48
BEST1-208ENST00000534553 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
BEST1-208ENST00000534553 LCE2BO14633 110 aa5.75□□□□□ -1.49
BEST1-208ENST00000534553 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
BEST1-208ENST00000534553 TNP1P09430 55 aa5.68□□□□□ -1.5
BEST1-208ENST00000534553 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
BEST1-208ENST00000534553 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
BEST1-208ENST00000534553 MT1BP07438 61 aa5.62□□□□□ -1.51
BEST1-208ENST00000534553 H3BS24 57 aa5.53□□□□□ -1.52
BEST1-208ENST00000534553 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
BEST1-208ENST00000534553 MT1XP80297 61 aa5.49□□□□□ -1.53
BEST1-208ENST00000534553 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
BEST1-208ENST00000534553 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
BEST1-208ENST00000534553 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
BEST1-208ENST00000534553 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
BEST1-208ENST00000534553 USH2AO75445 5202 aa5.32□□□□□ -1.56
BEST1-208ENST00000534553 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
BEST1-208ENST00000534553 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
BEST1-208ENST00000534553 KRTAP8-1Q8IUC2 63 aa5.28□□□□□ -1.56
BEST1-208ENST00000534553 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
BEST1-208ENST00000534553 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
BEST1-208ENST00000534553 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
BEST1-208ENST00000534553 SSPOA2VEC9 5147 aa5.14□□□□□ -1.59
BEST1-208ENST00000534553 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
BEST1-208ENST00000534553 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
BEST1-208ENST00000534553 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
BEST1-208ENST00000534553 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
BEST1-208ENST00000534553 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
BEST1-208ENST00000534553 KMT2DO14686 5537 aa4.97□□□□□ -1.61
BEST1-208ENST00000534553 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
BEST1-208ENST00000534553 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
BEST1-208ENST00000534553 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
BEST1-208ENST00000534553 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
BEST1-208ENST00000534553 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
BEST1-208ENST00000534553 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
BEST1-208ENST00000534553 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
BEST1-208ENST00000534553 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
BEST1-208ENST00000534553 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
BEST1-208ENST00000534553 MT1EP04732 61 aa4.81□□□□□ -1.64
BEST1-208ENST00000534553 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms