RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MT-ATP8P03928 68 aa9.37□□□□□ -0.91
CCS-208ENST00000533244 SCGB1A1P11684 91 aa9.37□□□□□ -0.91
CCS-208ENST00000533244 FCGBPQ9Y6R7 5405 aaPredicted RBP9.34□□□□□ -0.91
CCS-208ENST00000533244 FAM236AA0A1B0GUQ0 79 aa9.34□□□□□ -0.91
CCS-208ENST00000533244 FAM236BA0A1B0GV22 79 aa9.34□□□□□ -0.91
CCS-208ENST00000533244 KRTAP19-6Q3LI70 58 aa9.31□□□□□ -0.92
CCS-208ENST00000533244 NDUFC1O43677 76 aa9.26□□□□□ -0.93
CCS-208ENST00000533244 SPRR2GQ9BYE4 73 aa9.24□□□□□ -0.93
CCS-208ENST00000533244 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.22□□□□□ -0.93
CCS-208ENST00000533244 H0YAA0 97 aa9.21□□□□□ -0.94
CCS-208ENST00000533244 SMIM20Q8N5G0 67 aa9.21□□□□□ -0.94
CCS-208ENST00000533244 TRAV7A0A075B6U4 112 aa9.2□□□□□ -0.94
CCS-208ENST00000533244 DMAC1Q96GE9 116 aa9.19□□□□□ -0.94
CCS-208ENST00000533244 KRTAP19-8Q3LI54 63 aa9.16□□□□□ -0.94
CCS-208ENST00000533244 MT1BP07438 61 aa9.14□□□□□ -0.95
CCS-208ENST00000533244 CRIPTQ9P021 101 aa9.14□□□□□ -0.95
CCS-208ENST00000533244 Q5VV11 94 aa9.09□□□□□ -0.95
CCS-208ENST00000533244 ADM2Q7Z4H4 148 aa9.05□□□□□ -0.96
CCS-208ENST00000533244 KRTAP9-7A8MTY7 169 aa9.02□□□□□ -0.97
CCS-208ENST00000533244 MACF1Q9UPN3 7388 aaKnown RBP8.98□□□□□ -0.97
CCS-208ENST00000533244 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
CCS-208ENST00000533244 ACYP2P14621 99 aa8.96□□□□□ -0.98
CCS-208ENST00000533244 SERP2Q8N6R1 65 aa8.96□□□□□ -0.98
CCS-208ENST00000533244 C20orf197Q8N268 126 aa8.9□□□□□ -0.98
CCS-208ENST00000533244 A6NN06 94 aa8.89□□□□□ -0.99
CCS-208ENST00000533244 P0C880 135 aa8.89□□□□□ -0.99
CCS-208ENST00000533244 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
CCS-208ENST00000533244 KRTAP10-5P60370 271 aa8.88□□□□□ -0.99
CCS-208ENST00000533244 SPANXA2-OT1Q8N9U9 137 aa8.87□□□□□ -0.99
CCS-208ENST00000533244 SYNE2Q8WXH0 6885 aaKnown RBP8.86□□□□□ -0.99
CCS-208ENST00000533244 SPTSSBQ8NFR3 76 aa8.8□□□□□ -1
CCS-208ENST00000533244 R4GN34 69 aa8.8□□□□□ -1
CCS-208ENST00000533244 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
CCS-208ENST00000533244 M0QZ58 72 aa8.73□□□□□ -1.01
CCS-208ENST00000533244 COX7CP15954 63 aa8.73□□□□□ -1.01
CCS-208ENST00000533244 KRTAP6-3Q3LI67 103 aa8.69□□□□□ -1.02
CCS-208ENST00000533244 PLAC4Q8WY50 150 aa8.63□□□□□ -1.03
CCS-208ENST00000533244 ANAPC13Q9BS18 74 aa8.62□□□□□ -1.03
CCS-208ENST00000533244 MT1XP80297 61 aa8.61□□□□□ -1.03
CCS-208ENST00000533244 CYSTM1Q9H1C7 97 aa8.59□□□□□ -1.03
CCS-208ENST00000533244 H7BZZ5 65 aa8.58□□□□□ -1.04
CCS-208ENST00000533244 COA5Q86WW8 74 aa8.58□□□□□ -1.04
CCS-208ENST00000533244 PRO2289Q9P1D8 64 aa8.57□□□□□ -1.04
CCS-208ENST00000533244 LINC01554Q52M75 96 aa8.56□□□□□ -1.04
CCS-208ENST00000533244 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
CCS-208ENST00000533244 KRTAP5-9P26371 169 aa8.41□□□□□ -1.06
CCS-208ENST00000533244 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
CCS-208ENST00000533244 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
CCS-208ENST00000533244 MUC12Q9UKN1 5478 aa8.36□□□□□ -1.07
CCS-208ENST00000533244 KMT2DO14686 5537 aa8.34□□□□□ -1.07
CCS-208ENST00000533244 NEBP20929 6669 aa8.32□□□□□ -1.08
CCS-208ENST00000533244 SEC61GP60059 68 aa8.31□□□□□ -1.08
CCS-208ENST00000533244 PCP4P48539 62 aa8.29□□□□□ -1.08
CCS-208ENST00000533244 SERP1Q9Y6X1 66 aa8.29□□□□□ -1.08
CCS-208ENST00000533244 KRTAP10-7P60409 375 aaPredicted RBP8.2□□□□□ -1.1
CCS-208ENST00000533244 A0A1B0GU33 70 aa8.19□□□□□ -1.1
CCS-208ENST00000533244 ATP5EP56381 51 aaPredicted RBP8.19□□□□□ -1.1
CCS-208ENST00000533244 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
CCS-208ENST00000533244 MDN1Q9NU22 5596 aa8.18□□□□□ -1.1
CCS-208ENST00000533244 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
CCS-208ENST00000533244 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.1
CCS-208ENST00000533244 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
CCS-208ENST00000533244 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
CCS-208ENST00000533244 SPRR2FQ96RM1 72 aa8.13□□□□□ -1.11
CCS-208ENST00000533244 TMEM258P61165 79 aa8.12□□□□□ -1.11
CCS-208ENST00000533244 A0A1B0GU69 56 aa8.12□□□□□ -1.11
CCS-208ENST00000533244 A0A0D9SG42 100 aa8.1□□□□□ -1.11
CCS-208ENST00000533244 CAMK2N1Q7Z7J9 78 aa8.1□□□□□ -1.11
CCS-208ENST00000533244 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
CCS-208ENST00000533244 SPRR2EP22531 72 aa7.97□□□□□ -1.13
CCS-208ENST00000533244 SPRR2BP35325 72 aa7.97□□□□□ -1.13
CCS-208ENST00000533244 SPRR2AP35326 72 aa7.97□□□□□ -1.13
CCS-208ENST00000533244 SPINT4Q6UDR6 99 aa7.97□□□□□ -1.13
CCS-208ENST00000533244 SMIM26A0A096LP01 95 aa7.95□□□□□ -1.14
CCS-208ENST00000533244 LCE1AQ5T7P2 110 aa7.94□□□□□ -1.14
CCS-208ENST00000533244 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
CCS-208ENST00000533244 KRTAP20-1Q3LI63 56 aa7.92□□□□□ -1.14
CCS-208ENST00000533244 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
CCS-208ENST00000533244 A8MU10 97 aa7.89□□□□□ -1.15
CCS-208ENST00000533244 KRTAP2-3P0C7H8 128 aa7.78□□□□□ -1.16
CCS-208ENST00000533244 KRTAP2-4Q9BYR9 128 aa7.78□□□□□ -1.16
CCS-208ENST00000533244 RPS28P62857 69 aaKnown RBP7.72□□□□□ -1.17
CCS-208ENST00000533244 SPRR2DP22532 72 aa7.7□□□□□ -1.18
CCS-208ENST00000533244 KRTAP19-7Q3SYF9 63 aa7.7□□□□□ -1.18
CCS-208ENST00000533244 UQCR11O14957 56 aa7.69□□□□□ -1.18
CCS-208ENST00000533244 C10orf95Q9H7T3 257 aa7.64□□□□□ -1.19
CCS-208ENST00000533244 MT1EP04732 61 aa7.61□□□□□ -1.19
CCS-208ENST00000533244 Q1T7F1 81 aa7.57□□□□□ -1.2
CCS-208ENST00000533244 KRTAP2-2Q9BYT5 123 aa7.55□□□□□ -1.2
CCS-208ENST00000533244 KRTAP2-1Q9BYU5 128 aa7.55□□□□□ -1.2
CCS-208ENST00000533244 V9GYY9 64 aa7.55□□□□□ -1.2
CCS-208ENST00000533244 TNP1P09430 55 aa7.54□□□□□ -1.2
CCS-208ENST00000533244 KRTAP19-5Q3LI72 72 aa7.52□□□□□ -1.2
CCS-208ENST00000533244 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.21
CCS-208ENST00000533244 LCE5AQ5TCM9 118 aa7.51□□□□□ -1.21
CCS-208ENST00000533244 KRTAP19-3Q7Z4W3 81 aa7.51□□□□□ -1.21
CCS-208ENST00000533244 LCE3BQ5TA77 95 aa7.49□□□□□ -1.21
CCS-208ENST00000533244 PSPHP1O15172 72 aa7.47□□□□□ -1.21
CCS-208ENST00000533244 LCE3AQ5TA76 89 aa7.46□□□□□ -1.21
CCS-208ENST00000533244 MT1GP13640 62 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms