RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 BIRC6Q9NR09 4857 aa8.1□□□□□ -1.11
CACNA1E-208ENST00000533229 UQCR11O14957 56 aa8.09□□□□□ -1.11
CACNA1E-208ENST00000533229 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
CACNA1E-208ENST00000533229 COX6B2Q6YFQ2 88 aa8.02□□□□□ -1.13
CACNA1E-208ENST00000533229 XP32Q5T750 250 aa8□□□□□ -1.13
CACNA1E-208ENST00000533229 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
CACNA1E-208ENST00000533229 RPL37P61927 97 aaKnown RBP7.99□□□□□ -1.13
CACNA1E-208ENST00000533229 LPAP08519 4548 aa7.9□□□□□ -1.15
CACNA1E-208ENST00000533229 H0YAA0 97 aa7.89□□□□□ -1.15
CACNA1E-208ENST00000533229 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
CACNA1E-208ENST00000533229 A0A1B0GU33 70 aa7.85□□□□□ -1.15
CACNA1E-208ENST00000533229 H1FX-AS1Q4G0G2 97 aa7.83□□□□□ -1.16
CACNA1E-208ENST00000533229 CSAG1Q6PB30 78 aa7.83□□□□□ -1.16
CACNA1E-208ENST00000533229 LRP2P98164 4655 aa7.82□□□□□ -1.16
CACNA1E-208ENST00000533229 HERC2O95714 4834 aa7.82□□□□□ -1.16
CACNA1E-208ENST00000533229 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
CACNA1E-208ENST00000533229 ABCA13Q86UQ4 5058 aa7.8□□□□□ -1.16
CACNA1E-208ENST00000533229 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
CACNA1E-208ENST00000533229 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
CACNA1E-208ENST00000533229 TPRXLQ17RH7 258 aa7.73□□□□□ -1.17
CACNA1E-208ENST00000533229 S4R3F8 94 aa7.73□□□□□ -1.17
CACNA1E-208ENST00000533229 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
CACNA1E-208ENST00000533229 PCLOQ9Y6V0 5065 aa7.69□□□□□ -1.18
CACNA1E-208ENST00000533229 KRTAP13-4Q3LI77 160 aa7.64□□□□□ -1.19
CACNA1E-208ENST00000533229 P0C880 135 aa7.6□□□□□ -1.19
CACNA1E-208ENST00000533229 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
CACNA1E-208ENST00000533229 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
CACNA1E-208ENST00000533229 A0A0D9SG42 100 aa7.52□□□□□ -1.2
CACNA1E-208ENST00000533229 K7ERS5 55 aa7.49□□□□□ -1.21
CACNA1E-208ENST00000533229 MUC17Q685J3 4493 aa7.46□□□□□ -1.22
CACNA1E-208ENST00000533229 KRTAP4-1Q9BYQ7 146 aa7.43□□□□□ -1.22
CACNA1E-208ENST00000533229 J3QL48 77 aa7.42□□□□□ -1.22
CACNA1E-208ENST00000533229 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
CACNA1E-208ENST00000533229 ROMO1P60602 79 aa7.4□□□□□ -1.22
CACNA1E-208ENST00000533229 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
CACNA1E-208ENST00000533229 MUC2Q02817 5179 aa7.32□□□□□ -1.24
CACNA1E-208ENST00000533229 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
CACNA1E-208ENST00000533229 M0QZ58 72 aa7.29□□□□□ -1.24
CACNA1E-208ENST00000533229 HERC1Q15751 4861 aa7.28□□□□□ -1.24
CACNA1E-208ENST00000533229 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
CACNA1E-208ENST00000533229 SPINT4Q6UDR6 99 aa7.27□□□□□ -1.25
CACNA1E-208ENST00000533229 H3BS24 57 aa7.25□□□□□ -1.25
CACNA1E-208ENST00000533229 C10orf95Q9H7T3 257 aa7.25□□□□□ -1.25
CACNA1E-208ENST00000533229 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.26
CACNA1E-208ENST00000533229 R4GN34 69 aa7.17□□□□□ -1.26
CACNA1E-208ENST00000533229 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
CACNA1E-208ENST00000533229 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
CACNA1E-208ENST00000533229 FAT4Q6V0I7 4981 aa6.97□□□□□ -1.29
CACNA1E-208ENST00000533229 KRTAP15-1Q3LI76 137 aa6.96□□□□□ -1.3
CACNA1E-208ENST00000533229 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
CACNA1E-208ENST00000533229 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
CACNA1E-208ENST00000533229 NDUFAF8A1L188 74 aa6.82□□□□□ -1.32
CACNA1E-208ENST00000533229 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
CACNA1E-208ENST00000533229 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
CACNA1E-208ENST00000533229 MT1HP80294 61 aa6.69□□□□□ -1.34
CACNA1E-208ENST00000533229 M0R2T5 61 aa6.65□□□□□ -1.34
CACNA1E-208ENST00000533229 KRTAP19-1Q8IUB9 90 aa6.63□□□□□ -1.35
CACNA1E-208ENST00000533229 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
CACNA1E-208ENST00000533229 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
CACNA1E-208ENST00000533229 MT1FP04733 61 aa6.56□□□□□ -1.36
CACNA1E-208ENST00000533229 MT2AP02795 61 aa6.55□□□□□ -1.36
CACNA1E-208ENST00000533229 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
CACNA1E-208ENST00000533229 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
CACNA1E-208ENST00000533229 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
CACNA1E-208ENST00000533229 TNP1P09430 55 aa6.5□□□□□ -1.37
CACNA1E-208ENST00000533229 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
CACNA1E-208ENST00000533229 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
CACNA1E-208ENST00000533229 MT1BP07438 61 aa6.31□□□□□ -1.4
CACNA1E-208ENST00000533229 KRTAP9-3Q9BYQ3 159 aa6.26□□□□□ -1.41
CACNA1E-208ENST00000533229 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
CACNA1E-208ENST00000533229 LUZP6Q538Z0 58 aa6.23□□□□□ -1.41
CACNA1E-208ENST00000533229 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
CACNA1E-208ENST00000533229 LCE2AQ5TA79 106 aaPredicted RBP6.23□□□□□ -1.41
CACNA1E-208ENST00000533229 MT1XP80297 61 aa6.22□□□□□ -1.41
CACNA1E-208ENST00000533229 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
CACNA1E-208ENST00000533229 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
CACNA1E-208ENST00000533229 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
CACNA1E-208ENST00000533229 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
CACNA1E-208ENST00000533229 USH2AO75445 5202 aa6.05□□□□□ -1.44
CACNA1E-208ENST00000533229 LCE2BO14633 110 aa6.05□□□□□ -1.44
CACNA1E-208ENST00000533229 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
CACNA1E-208ENST00000533229 A0A0A0MQY5 61 aa5.96□□□□□ -1.46
CACNA1E-208ENST00000533229 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
CACNA1E-208ENST00000533229 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
CACNA1E-208ENST00000533229 LCE2DQ5TA82 110 aaPredicted RBP5.9□□□□□ -1.46
CACNA1E-208ENST00000533229 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
CACNA1E-208ENST00000533229 KMT2DO14686 5537 aa5.84□□□□□ -1.47
CACNA1E-208ENST00000533229 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
CACNA1E-208ENST00000533229 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
CACNA1E-208ENST00000533229 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
CACNA1E-208ENST00000533229 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
CACNA1E-208ENST00000533229 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
CACNA1E-208ENST00000533229 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
CACNA1E-208ENST00000533229 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
CACNA1E-208ENST00000533229 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
CACNA1E-208ENST00000533229 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
CACNA1E-208ENST00000533229 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
CACNA1E-208ENST00000533229 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
CACNA1E-208ENST00000533229 INE1O15225 51 aa5.41□□□□□ -1.54
CACNA1E-208ENST00000533229 MT1EP04732 61 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms