RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ADM2Q7Z4H4 148 aa8.7□□□□□ -1.02
VPS26B-206ENST00000531741 MT1HL1P0DM35 61 aa8.65□□□□□ -1.03
VPS26B-206ENST00000531741 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
VPS26B-206ENST00000531741 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
VPS26B-206ENST00000531741 RYR1P21817 5038 aa8.62□□□□□ -1.03
VPS26B-206ENST00000531741 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
VPS26B-206ENST00000531741 S4R3F8 94 aa8.57□□□□□ -1.04
VPS26B-206ENST00000531741 KRTAP10-6P60371 365 aaPredicted RBP8.55□□□□□ -1.04
VPS26B-206ENST00000531741 RYR3Q15413 4870 aa8.51□□□□□ -1.05
VPS26B-206ENST00000531741 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
VPS26B-206ENST00000531741 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
VPS26B-206ENST00000531741 K7ERS5 55 aa8.5□□□□□ -1.05
VPS26B-206ENST00000531741 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
VPS26B-206ENST00000531741 LINC01554Q52M75 96 aa8.48□□□□□ -1.05
VPS26B-206ENST00000531741 H3BS24 57 aa8.47□□□□□ -1.05
VPS26B-206ENST00000531741 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
VPS26B-206ENST00000531741 KIAA1109Q2LD37 5005 aa8.43□□□□□ -1.06
VPS26B-206ENST00000531741 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
VPS26B-206ENST00000531741 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
VPS26B-206ENST00000531741 P0C880 135 aa8.34□□□□□ -1.07
VPS26B-206ENST00000531741 ROMO1P60602 79 aa8.28□□□□□ -1.08
VPS26B-206ENST00000531741 A0A0D9SG42 100 aa8.27□□□□□ -1.09
VPS26B-206ENST00000531741 LRP2P98164 4655 aa8.24□□□□□ -1.09
VPS26B-206ENST00000531741 LPAP08519 4548 aa8.21□□□□□ -1.1
VPS26B-206ENST00000531741 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
VPS26B-206ENST00000531741 EPPK1P58107 5090 aaKnown RBP8.19□□□□□ -1.1
VPS26B-206ENST00000531741 M0QZ58 72 aa8.18□□□□□ -1.1
VPS26B-206ENST00000531741 SEC61BP60468 96 aaKnown RBP8.15□□□□□ -1.1
VPS26B-206ENST00000531741 KRTAP12-2P59991 146 aa8.13□□□□□ -1.11
VPS26B-206ENST00000531741 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
VPS26B-206ENST00000531741 CRIPTQ9P021 101 aa8.1□□□□□ -1.11
VPS26B-206ENST00000531741 ABCA13Q86UQ4 5058 aa8.06□□□□□ -1.12
VPS26B-206ENST00000531741 SPINT4Q6UDR6 99 aa8.02□□□□□ -1.13
VPS26B-206ENST00000531741 J3QL48 77 aa7.99□□□□□ -1.13
VPS26B-206ENST00000531741 KRTAP4-1Q9BYQ7 146 aa7.97□□□□□ -1.13
VPS26B-206ENST00000531741 MUC17Q685J3 4493 aa7.97□□□□□ -1.13
VPS26B-206ENST00000531741 R4GN34 69 aa7.93□□□□□ -1.14
VPS26B-206ENST00000531741 KRTAP19-2Q3LHN2 52 aa7.9□□□□□ -1.14
VPS26B-206ENST00000531741 C10orf95Q9H7T3 257 aa7.88□□□□□ -1.15
VPS26B-206ENST00000531741 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
VPS26B-206ENST00000531741 HERC2O95714 4834 aa7.79□□□□□ -1.16
VPS26B-206ENST00000531741 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
VPS26B-206ENST00000531741 KRTAP15-1Q3LI76 137 aa7.59□□□□□ -1.19
VPS26B-206ENST00000531741 FLGP20930 4061 aaPredicted RBP7.58□□□□□ -1.2
VPS26B-206ENST00000531741 CAMK2N1Q7Z7J9 78 aa7.5□□□□□ -1.21
VPS26B-206ENST00000531741 MUC2Q02817 5179 aa7.45□□□□□ -1.22
VPS26B-206ENST00000531741 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
VPS26B-206ENST00000531741 LCE2CQ5TA81 110 aa7.43□□□□□ -1.22
VPS26B-206ENST00000531741 A0A0A0MQY5 61 aa7.42□□□□□ -1.22
VPS26B-206ENST00000531741 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
VPS26B-206ENST00000531741 HERC1Q15751 4861 aa7.38□□□□□ -1.23
VPS26B-206ENST00000531741 SPRR2GQ9BYE4 73 aa7.31□□□□□ -1.24
VPS26B-206ENST00000531741 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
VPS26B-206ENST00000531741 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
VPS26B-206ENST00000531741 NDUFAF8A1L188 74 aa7.29□□□□□ -1.24
VPS26B-206ENST00000531741 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
VPS26B-206ENST00000531741 TNP1P09430 55 aa7.26□□□□□ -1.25
VPS26B-206ENST00000531741 MT1HP80294 61 aa7.22□□□□□ -1.25
VPS26B-206ENST00000531741 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
VPS26B-206ENST00000531741 M0R2T5 61 aa7.17□□□□□ -1.26
VPS26B-206ENST00000531741 FAT4Q6V0I7 4981 aa7.11□□□□□ -1.27
VPS26B-206ENST00000531741 MT2AP02795 61 aa7.09□□□□□ -1.27
VPS26B-206ENST00000531741 MT1FP04733 61 aa7.08□□□□□ -1.28
VPS26B-206ENST00000531741 KRTAP9-8Q9BYQ0 159 aa7.07□□□□□ -1.28
VPS26B-206ENST00000531741 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
VPS26B-206ENST00000531741 RNF213Q63HN8 5207 aa7.02□□□□□ -1.29
VPS26B-206ENST00000531741 KRTAP19-8Q3LI54 63 aa7□□□□□ -1.29
VPS26B-206ENST00000531741 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
VPS26B-206ENST00000531741 LUZP6Q538Z0 58 aa6.94□□□□□ -1.3
VPS26B-206ENST00000531741 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
VPS26B-206ENST00000531741 MT1BP07438 61 aa6.86□□□□□ -1.31
VPS26B-206ENST00000531741 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
VPS26B-206ENST00000531741 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
VPS26B-206ENST00000531741 MT1XP80297 61 aa6.79□□□□□ -1.32
VPS26B-206ENST00000531741 KRTAP9-3Q9BYQ3 159 aa6.78□□□□□ -1.32
VPS26B-206ENST00000531741 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
VPS26B-206ENST00000531741 KRTAP10-12P60413 245 aa6.63□□□□□ -1.35
VPS26B-206ENST00000531741 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
VPS26B-206ENST00000531741 PRO2289Q9P1D8 64 aa6.59□□□□□ -1.35
VPS26B-206ENST00000531741 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
VPS26B-206ENST00000531741 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
VPS26B-206ENST00000531741 LCE2BO14633 110 aa6.48□□□□□ -1.37
VPS26B-206ENST00000531741 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.38
VPS26B-206ENST00000531741 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
VPS26B-206ENST00000531741 LCE2DQ5TA82 110 aaPredicted RBP6.27□□□□□ -1.41
VPS26B-206ENST00000531741 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
VPS26B-206ENST00000531741 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
VPS26B-206ENST00000531741 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
VPS26B-206ENST00000531741 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
VPS26B-206ENST00000531741 USH2AO75445 5202 aa6.09□□□□□ -1.43
VPS26B-206ENST00000531741 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
VPS26B-206ENST00000531741 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
VPS26B-206ENST00000531741 INE1O15225 51 aa6.01□□□□□ -1.45
VPS26B-206ENST00000531741 KMT2DO14686 5537 aa5.96□□□□□ -1.46
VPS26B-206ENST00000531741 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
VPS26B-206ENST00000531741 KRTAP9-6A8MVA2 160 aa5.9□□□□□ -1.47
VPS26B-206ENST00000531741 MT1EP04732 61 aa5.89□□□□□ -1.47
VPS26B-206ENST00000531741 MT1LQ93083 61 aa5.88□□□□□ -1.47
VPS26B-206ENST00000531741 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
VPS26B-206ENST00000531741 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms