RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 NEBP20929 6669 aa4.83□□□□□ -1.64
CHMP4A-205ENST00000531158 C8orf87E5RJ46 101 aa4.83□□□□□ -1.64
CHMP4A-205ENST00000531158 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
CHMP4A-205ENST00000531158 IGHV6-1A0A0B4J1U7 121 aa4.82□□□□□ -1.64
CHMP4A-205ENST00000531158 COX6B2Q6YFQ2 88 aa4.82□□□□□ -1.64
CHMP4A-205ENST00000531158 Q1T7F1 81 aa4.81□□□□□ -1.64
CHMP4A-205ENST00000531158 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
CHMP4A-205ENST00000531158 V9GYY9 64 aa4.79□□□□□ -1.64
CHMP4A-205ENST00000531158 LOC101927531A0A1B0GV80 90 aa4.78□□□□□ -1.64
CHMP4A-205ENST00000531158 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
CHMP4A-205ENST00000531158 NDUFS5O43920 106 aa4.77□□□□□ -1.65
CHMP4A-205ENST00000531158 MPLKIPQ8TAP9 179 aa4.76□□□□□ -1.65
CHMP4A-205ENST00000531158 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
CHMP4A-205ENST00000531158 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
CHMP4A-205ENST00000531158 NOTCH2NLQ7Z3S9 236 aa4.73□□□□□ -1.65
CHMP4A-205ENST00000531158 COA5Q86WW8 74 aa4.73□□□□□ -1.65
CHMP4A-205ENST00000531158 LINC00313P59037 77 aa4.71□□□□□ -1.66
CHMP4A-205ENST00000531158 Q8N9P0 234 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-205ENST00000531158 MT2AP02795 61 aa4.7□□□□□ -1.66
CHMP4A-205ENST00000531158 MT1FP04733 61 aa4.68□□□□□ -1.66
CHMP4A-205ENST00000531158 Q75L30 129 aa4.68□□□□□ -1.66
CHMP4A-205ENST00000531158 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
CHMP4A-205ENST00000531158 KRTAP16-1A8MUX0 517 aa4.67□□□□□ -1.66
CHMP4A-205ENST00000531158 Q5W150 140 aa4.67□□□□□ -1.66
CHMP4A-205ENST00000531158 IGKV2-30P06310 120 aa4.65□□□□□ -1.67
CHMP4A-205ENST00000531158 Q5VV11 94 aa4.65□□□□□ -1.67
CHMP4A-205ENST00000531158 ATP11AUNQ6ZP68 121 aa4.65□□□□□ -1.67
CHMP4A-205ENST00000531158 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
CHMP4A-205ENST00000531158 A8MUN3 132 aa4.64□□□□□ -1.67
CHMP4A-205ENST00000531158 PSPHP1O15172 72 aa4.64□□□□□ -1.67
CHMP4A-205ENST00000531158 HRES1P13985 223 aa4.64□□□□□ -1.67
CHMP4A-205ENST00000531158 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
CHMP4A-205ENST00000531158 LINC01558Q9Y6Z2 57 aa4.64□□□□□ -1.67
CHMP4A-205ENST00000531158 PRR15LQ9BU68 103 aa4.63□□□□□ -1.67
CHMP4A-205ENST00000531158 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
CHMP4A-205ENST00000531158 ACYP2P14621 99 aa4.62□□□□□ -1.67
CHMP4A-205ENST00000531158 A8MUU9 505 aa4.6□□□□□ -1.67
CHMP4A-205ENST00000531158 C20orf166-AS1Q96NR2 134 aa4.6□□□□□ -1.67
CHMP4A-205ENST00000531158 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
CHMP4A-205ENST00000531158 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
CHMP4A-205ENST00000531158 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
CHMP4A-205ENST00000531158 CHKB-CPT1BH3BT56 60 aa4.57□□□□□ -1.68
CHMP4A-205ENST00000531158 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
CHMP4A-205ENST00000531158 C7orf65Q6ZTY9 151 aa4.55□□□□□ -1.68
CHMP4A-205ENST00000531158 IGKV2D-30A0A075B6S6 120 aa4.54□□□□□ -1.68
CHMP4A-205ENST00000531158 A6NED7 52 aa4.53□□□□□ -1.68
CHMP4A-205ENST00000531158 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
CHMP4A-205ENST00000531158 LCA10Q71F78 164 aa4.48□□□□□ -1.69
CHMP4A-205ENST00000531158 A0A1B0GU69 56 aa4.45□□□□□ -1.7
CHMP4A-205ENST00000531158 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
CHMP4A-205ENST00000531158 SPINK7P58062 85 aa4.45□□□□□ -1.7
CHMP4A-205ENST00000531158 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
CHMP4A-205ENST00000531158 A8MU10 97 aa4.44□□□□□ -1.7
CHMP4A-205ENST00000531158 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
CHMP4A-205ENST00000531158 RBM12B-AS1Q9P1G2 102 aa4.44□□□□□ -1.7
CHMP4A-205ENST00000531158 KMT2DO14686 5537 aa4.44□□□□□ -1.7
CHMP4A-205ENST00000531158 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
CHMP4A-205ENST00000531158 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
CHMP4A-205ENST00000531158 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
CHMP4A-205ENST00000531158 A6NN06 94 aa4.41□□□□□ -1.7
CHMP4A-205ENST00000531158 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
CHMP4A-205ENST00000531158 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
CHMP4A-205ENST00000531158 SEC61GP60059 68 aa4.4□□□□□ -1.71
CHMP4A-205ENST00000531158 UQCR11O14957 56 aa4.38□□□□□ -1.71
CHMP4A-205ENST00000531158 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
CHMP4A-205ENST00000531158 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
CHMP4A-205ENST00000531158 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
CHMP4A-205ENST00000531158 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
CHMP4A-205ENST00000531158 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
CHMP4A-205ENST00000531158 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
CHMP4A-205ENST00000531158 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
CHMP4A-205ENST00000531158 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
CHMP4A-205ENST00000531158 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
CHMP4A-205ENST00000531158 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
CHMP4A-205ENST00000531158 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
CHMP4A-205ENST00000531158 A0A1B0GU33 70 aa4.23□□□□□ -1.73
CHMP4A-205ENST00000531158 MT1BP07438 61 aa4.22□□□□□ -1.73
CHMP4A-205ENST00000531158 H0YAA0 97 aa4.21□□□□□ -1.74
CHMP4A-205ENST00000531158 KRTAP4-8A0A0G2JLE6 195 aa4.19□□□□□ -1.74
CHMP4A-205ENST00000531158 S4R3F8 94 aa4.18□□□□□ -1.74
CHMP4A-205ENST00000531158 SPRR2EP22531 72 aa4.14□□□□□ -1.75
CHMP4A-205ENST00000531158 SPRR2BP35325 72 aa4.14□□□□□ -1.75
CHMP4A-205ENST00000531158 SPRR2AP35326 72 aa4.14□□□□□ -1.75
CHMP4A-205ENST00000531158 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
CHMP4A-205ENST00000531158 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
CHMP4A-205ENST00000531158 K7ERS5 55 aa4.13□□□□□ -1.75
CHMP4A-205ENST00000531158 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
CHMP4A-205ENST00000531158 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
CHMP4A-205ENST00000531158 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
CHMP4A-205ENST00000531158 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
CHMP4A-205ENST00000531158 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
CHMP4A-205ENST00000531158 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
CHMP4A-205ENST00000531158 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
CHMP4A-205ENST00000531158 CSAG1Q6PB30 78 aa4.04□□□□□ -1.76
CHMP4A-205ENST00000531158 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
CHMP4A-205ENST00000531158 LINC01554Q52M75 96 aa4.02□□□□□ -1.77
CHMP4A-205ENST00000531158 SPRR2DP22532 72 aa4.01□□□□□ -1.77
CHMP4A-205ENST00000531158 P0C880 135 aa4□□□□□ -1.77
CHMP4A-205ENST00000531158 M0QZ58 72 aa3.99□□□□□ -1.77
CHMP4A-205ENST00000531158 ROMO1P60602 79 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms