RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 OCR1Q9BZK8 76 aa7.27□□□□□ -1.25
CPSF1-205ENST00000531042 KRTAP6-3Q3LI67 103 aa7.26□□□□□ -1.25
CPSF1-205ENST00000531042 C5orf47Q569G3 176 aa7.22□□□□□ -1.25
CPSF1-205ENST00000531042 KLKP1Q107X0 134 aa7.21□□□□□ -1.26
CPSF1-205ENST00000531042 C20orf197Q8N268 126 aa7.21□□□□□ -1.26
CPSF1-205ENST00000531042 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
CPSF1-205ENST00000531042 NDUFC1O43677 76 aa7.17□□□□□ -1.26
CPSF1-205ENST00000531042 S4R3F8 94 aa7.17□□□□□ -1.26
CPSF1-205ENST00000531042 TMEM258P61165 79 aa7.16□□□□□ -1.26
CPSF1-205ENST00000531042 C1orf64Q8NEQ6 169 aa7.14□□□□□ -1.27
CPSF1-205ENST00000531042 CYSTM1Q9H1C7 97 aa7.14□□□□□ -1.27
CPSF1-205ENST00000531042 MT1BP07438 61 aa7.13□□□□□ -1.27
CPSF1-205ENST00000531042 CSAG1Q6PB30 78 aa7.13□□□□□ -1.27
CPSF1-205ENST00000531042 LCA10Q71F78 164 aa7.12□□□□□ -1.27
CPSF1-205ENST00000531042 H3BPC8 53 aa7.11□□□□□ -1.27
CPSF1-205ENST00000531042 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
CPSF1-205ENST00000531042 TP53AIP1Q9HCN2 124 aa7.11□□□□□ -1.27
CPSF1-205ENST00000531042 A6NN06 94 aa7.1□□□□□ -1.27
CPSF1-205ENST00000531042 H7BZZ5 65 aa7.1□□□□□ -1.27
CPSF1-205ENST00000531042 Q5VV11 94 aa7.1□□□□□ -1.27
CPSF1-205ENST00000531042 SNURFQ9Y675 71 aa7.1□□□□□ -1.27
CPSF1-205ENST00000531042 MP68P56378 58 aa7.09□□□□□ -1.27
CPSF1-205ENST00000531042 KRTAP19-8Q3LI54 63 aa7.09□□□□□ -1.27
CPSF1-205ENST00000531042 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
CPSF1-205ENST00000531042 TRAV22A0A0B4J277 110 aa7.05□□□□□ -1.28
CPSF1-205ENST00000531042 H0Y9P7 68 aa7.04□□□□□ -1.28
CPSF1-205ENST00000531042 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
CPSF1-205ENST00000531042 NEBP20929 6669 aa7.02□□□□□ -1.29
CPSF1-205ENST00000531042 KRTAP10-5P60370 271 aa7□□□□□ -1.29
CPSF1-205ENST00000531042 LINC00208Q96KT6 92 aa6.99□□□□□ -1.29
CPSF1-205ENST00000531042 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
CPSF1-205ENST00000531042 CYP4F30PQ9H0H9 118 aa6.97□□□□□ -1.29
CPSF1-205ENST00000531042 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.3
CPSF1-205ENST00000531042 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
CPSF1-205ENST00000531042 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
CPSF1-205ENST00000531042 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
CPSF1-205ENST00000531042 CRIPTQ9P021 101 aa6.91□□□□□ -1.3
CPSF1-205ENST00000531042 KRTAP5-9P26371 169 aa6.86□□□□□ -1.31
CPSF1-205ENST00000531042 H0YAA0 97 aa6.8□□□□□ -1.32
CPSF1-205ENST00000531042 KMT2DO14686 5537 aa6.79□□□□□ -1.32
CPSF1-205ENST00000531042 KRTAP20-1Q3LI63 56 aa6.79□□□□□ -1.32
CPSF1-205ENST00000531042 MDN1Q9NU22 5596 aa6.77□□□□□ -1.33
CPSF1-205ENST00000531042 SMIM26A0A096LP01 95 aa6.76□□□□□ -1.33
CPSF1-205ENST00000531042 A8MUN3 132 aa6.71□□□□□ -1.34
CPSF1-205ENST00000531042 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
CPSF1-205ENST00000531042 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
CPSF1-205ENST00000531042 COA5Q86WW8 74 aa6.67□□□□□ -1.34
CPSF1-205ENST00000531042 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.34
CPSF1-205ENST00000531042 ACYP2P14621 99 aa6.64□□□□□ -1.35
CPSF1-205ENST00000531042 MT1XP80297 61 aa6.64□□□□□ -1.35
CPSF1-205ENST00000531042 SPRR2FQ96RM1 72 aa6.61□□□□□ -1.35
CPSF1-205ENST00000531042 Q1T7F1 81 aa6.6□□□□□ -1.35
CPSF1-205ENST00000531042 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
CPSF1-205ENST00000531042 V9GYY9 64 aa6.6□□□□□ -1.35
CPSF1-205ENST00000531042 KRTAP2-3P0C7H8 128 aa6.58□□□□□ -1.36
CPSF1-205ENST00000531042 KRTAP2-4Q9BYR9 128 aa6.58□□□□□ -1.36
CPSF1-205ENST00000531042 R4GN34 69 aa6.56□□□□□ -1.36
CPSF1-205ENST00000531042 P0C880 135 aa6.55□□□□□ -1.36
CPSF1-205ENST00000531042 SPRR2EP22531 72 aa6.55□□□□□ -1.36
CPSF1-205ENST00000531042 SPRR2BP35325 72 aa6.55□□□□□ -1.36
CPSF1-205ENST00000531042 SPRR2AP35326 72 aa6.55□□□□□ -1.36
CPSF1-205ENST00000531042 CHKB-CPT1BH3BT56 60 aa6.52□□□□□ -1.37
CPSF1-205ENST00000531042 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
CPSF1-205ENST00000531042 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
CPSF1-205ENST00000531042 M0QZ58 72 aa6.5□□□□□ -1.37
CPSF1-205ENST00000531042 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
CPSF1-205ENST00000531042 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
CPSF1-205ENST00000531042 LCE1AQ5T7P2 110 aa6.45□□□□□ -1.38
CPSF1-205ENST00000531042 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
CPSF1-205ENST00000531042 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
CPSF1-205ENST00000531042 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
CPSF1-205ENST00000531042 LINC01554Q52M75 96 aa6.41□□□□□ -1.38
CPSF1-205ENST00000531042 PRR15LQ9BU68 103 aa6.41□□□□□ -1.38
CPSF1-205ENST00000531042 PSPHP1O15172 72 aa6.4□□□□□ -1.38
CPSF1-205ENST00000531042 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
CPSF1-205ENST00000531042 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
CPSF1-205ENST00000531042 SPRR2DP22532 72 aa6.33□□□□□ -1.4
CPSF1-205ENST00000531042 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
CPSF1-205ENST00000531042 A0A1B0GU69 56 aa6.31□□□□□ -1.4
CPSF1-205ENST00000531042 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
CPSF1-205ENST00000531042 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
CPSF1-205ENST00000531042 PRO0628Q9UI54 55 aa6.26□□□□□ -1.41
CPSF1-205ENST00000531042 SEC61GP60059 68 aa6.25□□□□□ -1.41
CPSF1-205ENST00000531042 A6NED7 52 aa6.24□□□□□ -1.41
CPSF1-205ENST00000531042 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
CPSF1-205ENST00000531042 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
CPSF1-205ENST00000531042 UQCR11O14957 56 aa6.16□□□□□ -1.42
CPSF1-205ENST00000531042 SPATA8Q6RVD6 105 aa6.11□□□□□ -1.43
CPSF1-205ENST00000531042 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
CPSF1-205ENST00000531042 SVIPQ8NHG7 77 aa6.08□□□□□ -1.44
CPSF1-205ENST00000531042 A0A1B0GU33 70 aa6.06□□□□□ -1.44
CPSF1-205ENST00000531042 A8MU10 97 aa6.06□□□□□ -1.44
CPSF1-205ENST00000531042 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
CPSF1-205ENST00000531042 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
CPSF1-205ENST00000531042 KRTAP19-7Q3SYF9 63 aa5.94□□□□□ -1.46
CPSF1-205ENST00000531042 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
CPSF1-205ENST00000531042 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
CPSF1-205ENST00000531042 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
CPSF1-205ENST00000531042 MT1EP04732 61 aa5.89□□□□□ -1.47
CPSF1-205ENST00000531042 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms