RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 RYR2Q92736 4967 aa3.05□□□□□ -1.92
PCF11-205ENST00000530906 CHKB-CPT1BH3BT56 60 aa3.05□□□□□ -1.92
PCF11-205ENST00000530906 Q75L30 129 aa3.05□□□□□ -1.92
PCF11-205ENST00000530906 VPS13BQ7Z7G8 4022 aa3.04□□□□□ -1.92
PCF11-205ENST00000530906 SACSQ9NZJ4 4579 aa3.04□□□□□ -1.92
PCF11-205ENST00000530906 KRTAP10-8P60410 259 aa3.04□□□□□ -1.92
PCF11-205ENST00000530906 Q5VSD8 79 aa3.04□□□□□ -1.92
PCF11-205ENST00000530906 DYNC1H1Q14204 4646 aaKnown RBP3.04□□□□□ -1.92
PCF11-205ENST00000530906 PSPHP1O15172 72 aa3.03□□□□□ -1.92
PCF11-205ENST00000530906 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
PCF11-205ENST00000530906 Q5VV11 94 aa3.03□□□□□ -1.92
PCF11-205ENST00000530906 SPTSSBQ8NFR3 76 aa3.03□□□□□ -1.92
PCF11-205ENST00000530906 BRK1Q8WUW1 75 aa3.03□□□□□ -1.92
PCF11-205ENST00000530906 PRR15LQ9BU68 103 aa3.03□□□□□ -1.92
PCF11-205ENST00000530906 RETNLBQ9BQ08 111 aa3.01□□□□□ -1.93
PCF11-205ENST00000530906 FLG2Q5D862 2391 aaPredicted RBP3□□□□□ -1.93
PCF11-205ENST00000530906 PKHD1P08F94 4074 aa2.99□□□□□ -1.93
PCF11-205ENST00000530906 C9orf92A6NGG3 77 aa2.99□□□□□ -1.93
PCF11-205ENST00000530906 APOBP04114 4563 aaKnown RBP2.98□□□□□ -1.93
PCF11-205ENST00000530906 A6NED7 52 aa2.98□□□□□ -1.93
PCF11-205ENST00000530906 ATP11AUNQ6ZP68 121 aa2.98□□□□□ -1.93
PCF11-205ENST00000530906 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
PCF11-205ENST00000530906 A0A1B0GU69 56 aa2.97□□□□□ -1.93
PCF11-205ENST00000530906 SPINK7P58062 85 aa2.97□□□□□ -1.93
PCF11-205ENST00000530906 RPL37P61927 97 aaKnown RBP2.96□□□□□ -1.94
PCF11-205ENST00000530906 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
PCF11-205ENST00000530906 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
PCF11-205ENST00000530906 KMT2CQ8NEZ4 4911 aaKnown RBP2.95□□□□□ -1.94
PCF11-205ENST00000530906 SEC61GP60059 68 aa2.95□□□□□ -1.94
PCF11-205ENST00000530906 PKHD1L1Q86WI1 4243 aa2.95□□□□□ -1.94
PCF11-205ENST00000530906 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
PCF11-205ENST00000530906 MT1HL1P0DM35 61 aa2.94□□□□□ -1.94
PCF11-205ENST00000530906 COX6B2Q6YFQ2 88 aa2.94□□□□□ -1.94
PCF11-205ENST00000530906 RYR1P21817 5038 aa2.94□□□□□ -1.94
PCF11-205ENST00000530906 UQCR11O14957 56 aa2.93□□□□□ -1.94
PCF11-205ENST00000530906 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
PCF11-205ENST00000530906 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
PCF11-205ENST00000530906 LCA10Q71F78 164 aa2.92□□□□□ -1.94
PCF11-205ENST00000530906 FAT1Q14517 4588 aa2.91□□□□□ -1.94
PCF11-205ENST00000530906 SPATA8Q6RVD6 105 aa2.9□□□□□ -1.95
PCF11-205ENST00000530906 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
PCF11-205ENST00000530906 DMBT1Q9UGM3 2413 aaPredicted RBP2.89□□□□□ -1.95
PCF11-205ENST00000530906 MIR22HGQ0VDD5 57 aa2.88□□□□□ -1.95
PCF11-205ENST00000530906 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
PCF11-205ENST00000530906 RYR3Q15413 4870 aa2.87□□□□□ -1.95
PCF11-205ENST00000530906 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
PCF11-205ENST00000530906 HSPG2P98160 4391 aa2.85□□□□□ -1.95
PCF11-205ENST00000530906 A6NN06 94 aa2.85□□□□□ -1.95
PCF11-205ENST00000530906 KTN1-AS1Q86SY8 53 aa2.84□□□□□ -1.95
PCF11-205ENST00000530906 RBM12B-AS1Q9P1G2 102 aa2.84□□□□□ -1.95
PCF11-205ENST00000530906 KIAA1109Q2LD37 5005 aa2.84□□□□□ -1.95
PCF11-205ENST00000530906 FAT3Q8TDW7 4589 aa2.84□□□□□ -1.96
PCF11-205ENST00000530906 TNXBP22105 4242 aa2.84□□□□□ -1.96
PCF11-205ENST00000530906 A0A1B0GU33 70 aa2.83□□□□□ -1.96
PCF11-205ENST00000530906 A8MU10 97 aa2.83□□□□□ -1.96
PCF11-205ENST00000530906 SEC61BP60468 96 aaKnown RBP2.83□□□□□ -1.96
PCF11-205ENST00000530906 H1FX-AS1Q4G0G2 97 aa2.83□□□□□ -1.96
PCF11-205ENST00000530906 S4R3F8 94 aa2.83□□□□□ -1.96
PCF11-205ENST00000530906 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
PCF11-205ENST00000530906 K7ERS5 55 aa2.79□□□□□ -1.96
PCF11-205ENST00000530906 H0YAA0 97 aa2.78□□□□□ -1.96
PCF11-205ENST00000530906 CSAG1Q6PB30 78 aa2.77□□□□□ -1.97
PCF11-205ENST00000530906 EPPK1P58107 5090 aaKnown RBP2.75□□□□□ -1.97
PCF11-205ENST00000530906 MYCBP2O75592 4640 aa2.75□□□□□ -1.97
PCF11-205ENST00000530906 M0QZ58 72 aa2.73□□□□□ -1.97
PCF11-205ENST00000530906 BIRC6Q9NR09 4857 aa2.71□□□□□ -1.98
PCF11-205ENST00000530906 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
PCF11-205ENST00000530906 HERC2O95714 4834 aa2.7□□□□□ -1.98
PCF11-205ENST00000530906 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
PCF11-205ENST00000530906 ADM2Q7Z4H4 148 aa2.69□□□□□ -1.98
PCF11-205ENST00000530906 P0C880 135 aa2.68□□□□□ -1.98
PCF11-205ENST00000530906 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
PCF11-205ENST00000530906 ABCA13Q86UQ4 5058 aa2.67□□□□□ -1.98
PCF11-205ENST00000530906 KRTAP13-4Q3LI77 160 aa2.66□□□□□ -1.98
PCF11-205ENST00000530906 LRP2P98164 4655 aa2.66□□□□□ -1.98
PCF11-205ENST00000530906 ROMO1P60602 79 aa2.64□□□□□ -1.99
PCF11-205ENST00000530906 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
PCF11-205ENST00000530906 KRTAP4-1Q9BYQ7 146 aa2.63□□□□□ -1.99
PCF11-205ENST00000530906 A0A0D9SG42 100 aa2.62□□□□□ -1.99
PCF11-205ENST00000530906 PRAC1Q96KF2 57 aa2.62□□□□□ -1.99
PCF11-205ENST00000530906 R4GN34 69 aa2.62□□□□□ -1.99
PCF11-205ENST00000530906 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
PCF11-205ENST00000530906 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
PCF11-205ENST00000530906 CRIPTQ9P021 101 aa2.61□□□□□ -1.99
PCF11-205ENST00000530906 KRTAP25-1Q3LHN0 102 aa2.6□□□□□ -1.99
PCF11-205ENST00000530906 LINC01554Q52M75 96 aa2.6□□□□□ -1.99
PCF11-205ENST00000530906 MUC17Q685J3 4493 aa2.58□□□□□ -2
PCF11-205ENST00000530906 KRTAP12-2P59991 146 aa2.57□□□□□ -2
PCF11-205ENST00000530906 SPINT4Q6UDR6 99 aa2.57□□□□□ -2
PCF11-205ENST00000530906 LPAP08519 4548 aa2.56□□□□□ -2
PCF11-205ENST00000530906 HERC1Q15751 4861 aa2.54□□□□□ -2
PCF11-205ENST00000530906 HMCN2Q8NDA2 5059 aa2.52□□□□□ -2.01
PCF11-205ENST00000530906 PCLOQ9Y6V0 5065 aa2.51□□□□□ -2.01
PCF11-205ENST00000530906 FLGP20930 4061 aaPredicted RBP2.49□□□□□ -2.01
PCF11-205ENST00000530906 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
PCF11-205ENST00000530906 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
PCF11-205ENST00000530906 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
PCF11-205ENST00000530906 CAMK2N1Q7Z7J9 78 aa2.47□□□□□ -2.01
PCF11-205ENST00000530906 SPRR2GQ9BYE4 73 aa2.47□□□□□ -2.01
PCF11-205ENST00000530906 M0R2T5 61 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms