RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 IGHV6-1A0A0B4J1U7 121 aa3.1□□□□□ -1.91
CSDE1-213ENST00000530784 A0A1B0GV72 72 aa3.1□□□□□ -1.91
CSDE1-213ENST00000530784 ANKRD29Q8N6D5 301 aa3.1□□□□□ -1.91
CSDE1-213ENST00000530784 LINC00846Q9NV44 126 aa3.1□□□□□ -1.91
CSDE1-213ENST00000530784 H3BQ85 93 aa3.09□□□□□ -1.91
CSDE1-213ENST00000530784 DNAL4O96015 105 aa3.09□□□□□ -1.91
CSDE1-213ENST00000530784 ETDBQ3ZM63 59 aa3.08□□□□□ -1.92
CSDE1-213ENST00000530784 LINC00472Q9H8W2 130 aa3.08□□□□□ -1.92
CSDE1-213ENST00000530784 ORMDL1Q9P0S3 153 aa3.08□□□□□ -1.92
CSDE1-213ENST00000530784 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
CSDE1-213ENST00000530784 C8orf87E5RJ46 101 aa3.07□□□□□ -1.92
CSDE1-213ENST00000530784 TMEM256-PLSCR3K7ERE1 68 aa3.07□□□□□ -1.92
CSDE1-213ENST00000530784 CCKP06307 115 aa3.07□□□□□ -1.92
CSDE1-213ENST00000530784 BAALC-AS2P0C853 105 aa3.07□□□□□ -1.92
CSDE1-213ENST00000530784 SPINK7P58062 85 aa3.06□□□□□ -1.92
CSDE1-213ENST00000530784 KRTAP12-3P60328 96 aa3.06□□□□□ -1.92
CSDE1-213ENST00000530784 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
CSDE1-213ENST00000530784 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
CSDE1-213ENST00000530784 VPS25Q9BRG1 176 aa3.06□□□□□ -1.92
CSDE1-213ENST00000530784 A8MWP4 228 aa3.05□□□□□ -1.92
CSDE1-213ENST00000530784 JMJD7-PLA2G4BH0Y9G9 81 aa3.05□□□□□ -1.92
CSDE1-213ENST00000530784 J3QR89 54 aa3.05□□□□□ -1.92
CSDE1-213ENST00000530784 K7ERU9 68 aa3.05□□□□□ -1.92
CSDE1-213ENST00000530784 C1orf64Q8NEQ6 169 aa3.05□□□□□ -1.92
CSDE1-213ENST00000530784 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
CSDE1-213ENST00000530784 FAM240AA0A1B0GVK7 77 aa3.03□□□□□ -1.92
CSDE1-213ENST00000530784 J3KT08 172 aa3.03□□□□□ -1.92
CSDE1-213ENST00000530784 WFDC13Q8IUB5 93 aa3.03□□□□□ -1.92
CSDE1-213ENST00000530784 LOC110117498A0A087WWA1 95 aa3.02□□□□□ -1.93
CSDE1-213ENST00000530784 ACYP1P07311 99 aa3.02□□□□□ -1.93
CSDE1-213ENST00000530784 PDE6GP18545 87 aa3.02□□□□□ -1.93
CSDE1-213ENST00000530784 DSCR8Q96T75 97 aa3.02□□□□□ -1.93
CSDE1-213ENST00000530784 NDUFB1O75438 58 aa3.01□□□□□ -1.93
CSDE1-213ENST00000530784 RBM3P98179 157 aaKnown RBP3.01□□□□□ -1.93
CSDE1-213ENST00000530784 A0A1B0GW54 56 aa3□□□□□ -1.93
CSDE1-213ENST00000530784 Q6ZQT0 140 aa3□□□□□ -1.93
CSDE1-213ENST00000530784 C14orf132Q9NPU4 83 aa3□□□□□ -1.93
CSDE1-213ENST00000530784 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
CSDE1-213ENST00000530784 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
CSDE1-213ENST00000530784 P0C880 135 aa2.98□□□□□ -1.93
CSDE1-213ENST00000530784 IGKV3D-7A0A0C4DH55 119 aa2.96□□□□□ -1.94
CSDE1-213ENST00000530784 H1FX-AS1Q4G0G2 97 aa2.96□□□□□ -1.94
CSDE1-213ENST00000530784 PSPHP1O15172 72 aa2.95□□□□□ -1.94
CSDE1-213ENST00000530784 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
CSDE1-213ENST00000530784 LINC00643Q86TS7 51 aa2.95□□□□□ -1.94
CSDE1-213ENST00000530784 ATP5EP2Q5VTU8 51 aa2.93□□□□□ -1.94
CSDE1-213ENST00000530784 PRR15Q8IV56 129 aa2.93□□□□□ -1.94
CSDE1-213ENST00000530784 TMEM254Q8TBM7 123 aa2.93□□□□□ -1.94
CSDE1-213ENST00000530784 MRPL34Q9BQ48 92 aaKnown RBP2.93□□□□□ -1.94
CSDE1-213ENST00000530784 IMUPQ9GZP8 106 aa2.93□□□□□ -1.94
CSDE1-213ENST00000530784 MMP24-AS1A0A0U1RRL7 71 aa2.92□□□□□ -1.94
CSDE1-213ENST00000530784 NDUFS5O43920 106 aa2.92□□□□□ -1.94
CSDE1-213ENST00000530784 UBL5Q9BZL1 73 aa2.92□□□□□ -1.94
CSDE1-213ENST00000530784 NEBP20929 6669 aa2.92□□□□□ -1.94
CSDE1-213ENST00000530784 MT-ATP8P03928 68 aa2.91□□□□□ -1.94
CSDE1-213ENST00000530784 NREPQ16612 68 aa2.91□□□□□ -1.94
CSDE1-213ENST00000530784 C7orf65Q6ZTY9 151 aa2.91□□□□□ -1.94
CSDE1-213ENST00000530784 hDV103S1A0JD37 113 aa2.9□□□□□ -1.95
CSDE1-213ENST00000530784 A6NN06 94 aa2.89□□□□□ -1.95
CSDE1-213ENST00000530784 K7EQZ3 153 aa2.89□□□□□ -1.95
CSDE1-213ENST00000530784 SCGB1A1P11684 91 aa2.89□□□□□ -1.95
CSDE1-213ENST00000530784 FAM236AA0A1B0GUQ0 79 aa2.88□□□□□ -1.95
CSDE1-213ENST00000530784 FAM236BA0A1B0GV22 79 aa2.88□□□□□ -1.95
CSDE1-213ENST00000530784 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
CSDE1-213ENST00000530784 HIST1H4AP62805 103 aaKnown RBP2.87□□□□□ -1.95
CSDE1-213ENST00000530784 C4orf26Q17RF5 130 aa2.87□□□□□ -1.95
CSDE1-213ENST00000530784 Q5VV11 94 aa2.87□□□□□ -1.95
CSDE1-213ENST00000530784 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
CSDE1-213ENST00000530784 MT1BP07438 61 aa2.85□□□□□ -1.95
CSDE1-213ENST00000530784 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
CSDE1-213ENST00000530784 HCG22E2RYF7 251 aa2.84□□□□□ -1.95
CSDE1-213ENST00000530784 CASC2Q6XLA1 102 aa2.84□□□□□ -1.95
CSDE1-213ENST00000530784 S4R3F8 94 aa2.84□□□□□ -1.95
CSDE1-213ENST00000530784 A0A087WVE0 104 aa2.83□□□□□ -1.96
CSDE1-213ENST00000530784 KRTAP19-8Q3LI54 63 aa2.83□□□□□ -1.96
CSDE1-213ENST00000530784 SPRR2GQ9BYE4 73 aa2.83□□□□□ -1.96
CSDE1-213ENST00000530784 CSAG1Q6PB30 78 aa2.82□□□□□ -1.96
CSDE1-213ENST00000530784 ATOX1O00244 68 aa2.81□□□□□ -1.96
CSDE1-213ENST00000530784 LCA10Q71F78 164 aa2.8□□□□□ -1.96
CSDE1-213ENST00000530784 SMIM20Q8N5G0 67 aa2.8□□□□□ -1.96
CSDE1-213ENST00000530784 KLKP1Q107X0 134 aa2.79□□□□□ -1.96
CSDE1-213ENST00000530784 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
CSDE1-213ENST00000530784 KMT2DO14686 5537 aa2.78□□□□□ -1.96
CSDE1-213ENST00000530784 R4GN34 69 aa2.78□□□□□ -1.96
CSDE1-213ENST00000530784 TRAV7A0A075B6U4 112 aa2.77□□□□□ -1.97
CSDE1-213ENST00000530784 COX7CP15954 63 aa2.77□□□□□ -1.97
CSDE1-213ENST00000530784 SERP2Q8N6R1 65 aa2.77□□□□□ -1.97
CSDE1-213ENST00000530784 ANAPC13Q9BS18 74 aa2.77□□□□□ -1.97
CSDE1-213ENST00000530784 UQCRQO14949 82 aa2.76□□□□□ -1.97
CSDE1-213ENST00000530784 CRIPTQ9P021 101 aa2.75□□□□□ -1.97
CSDE1-213ENST00000530784 TP53AIP1Q9HCN2 124 aa2.74□□□□□ -1.97
CSDE1-213ENST00000530784 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
CSDE1-213ENST00000530784 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
CSDE1-213ENST00000530784 H3BPC8 53 aa2.72□□□□□ -1.97
CSDE1-213ENST00000530784 CCDC179H3BU77 68 aa2.72□□□□□ -1.97
CSDE1-213ENST00000530784 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
CSDE1-213ENST00000530784 TRAV22A0A0B4J277 110 aa2.7□□□□□ -1.98
CSDE1-213ENST00000530784 SPRR2EP22531 72 aa2.7□□□□□ -1.98
CSDE1-213ENST00000530784 SPRR2BP35325 72 aa2.7□□□□□ -1.98
CSDE1-213ENST00000530784 SPRR2AP35326 72 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms