RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 NOTCH2NLQ7Z3S9 236 aa2.56□□□□□ -2
SSBP3-213ENST00000530618 RBM12B-AS1Q9P1G2 102 aa2.56□□□□□ -2
SSBP3-213ENST00000530618 LOC101927531A0A1B0GV80 90 aa2.55□□□□□ -2
SSBP3-213ENST00000530618 RPS28P62857 69 aaKnown RBP2.55□□□□□ -2
SSBP3-213ENST00000530618 C5orf47Q569G3 176 aa2.55□□□□□ -2
SSBP3-213ENST00000530618 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
SSBP3-213ENST00000530618 TMEM258P61165 79 aa2.54□□□□□ -2
SSBP3-213ENST00000530618 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
SSBP3-213ENST00000530618 SERP2Q8N6R1 65 aa2.54□□□□□ -2
SSBP3-213ENST00000530618 IGKV2D-30A0A075B6S6 120 aa2.53□□□□□ -2
SSBP3-213ENST00000530618 TRAV7A0A075B6U4 112 aa2.53□□□□□ -2
SSBP3-213ENST00000530618 FAM236DA0A1B0GTK5 79 aa2.53□□□□□ -2
SSBP3-213ENST00000530618 H0Y9P7 68 aa2.53□□□□□ -2
SSBP3-213ENST00000530618 IGKV2-30P06310 120 aa2.53□□□□□ -2
SSBP3-213ENST00000530618 FAM236CP0DP71 79 aa2.53□□□□□ -2
SSBP3-213ENST00000530618 SPINK7P58062 85 aa2.52□□□□□ -2.01
SSBP3-213ENST00000530618 MT1HP80294 61 aa2.52□□□□□ -2.01
SSBP3-213ENST00000530618 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
SSBP3-213ENST00000530618 Q5W150 140 aa2.51□□□□□ -2.01
SSBP3-213ENST00000530618 C1orf64Q8NEQ6 169 aa2.51□□□□□ -2.01
SSBP3-213ENST00000530618 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
SSBP3-213ENST00000530618 LINC00208Q96KT6 92 aa2.5□□□□□ -2.01
SSBP3-213ENST00000530618 OCR1Q9BZK8 76 aa2.5□□□□□ -2.01
SSBP3-213ENST00000530618 FCGBPQ9Y6R7 5405 aaPredicted RBP2.49□□□□□ -2.01
SSBP3-213ENST00000530618 NDUFC1O43677 76 aa2.48□□□□□ -2.01
SSBP3-213ENST00000530618 KRTAP10-6P60371 365 aaPredicted RBP2.48□□□□□ -2.01
SSBP3-213ENST00000530618 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
SSBP3-213ENST00000530618 A8MUN3 132 aa2.47□□□□□ -2.01
SSBP3-213ENST00000530618 ATP5EP56381 51 aaPredicted RBP2.47□□□□□ -2.01
SSBP3-213ENST00000530618 CYP4F30PQ9H0H9 118 aa2.47□□□□□ -2.01
SSBP3-213ENST00000530618 MACF1Q9UPN3 7388 aaKnown RBP2.47□□□□□ -2.01
SSBP3-213ENST00000530618 KLKP1Q107X0 134 aa2.46□□□□□ -2.02
SSBP3-213ENST00000530618 C20orf197Q8N268 126 aa2.46□□□□□ -2.02
SSBP3-213ENST00000530618 SERP1Q9Y6X1 66 aa2.45□□□□□ -2.02
SSBP3-213ENST00000530618 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
SSBP3-213ENST00000530618 M0R2T5 61 aa2.44□□□□□ -2.02
SSBP3-213ENST00000530618 HRES1P13985 223 aa2.44□□□□□ -2.02
SSBP3-213ENST00000530618 C4orf26Q17RF5 130 aa2.43□□□□□ -2.02
SSBP3-213ENST00000530618 H1FX-AS1Q4G0G2 97 aa2.43□□□□□ -2.02
SSBP3-213ENST00000530618 SPTSSBQ8NFR3 76 aa2.43□□□□□ -2.02
SSBP3-213ENST00000530618 CYSTM1Q9H1C7 97 aa2.43□□□□□ -2.02
SSBP3-213ENST00000530618 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
SSBP3-213ENST00000530618 CHKB-CPT1BH3BT56 60 aa2.42□□□□□ -2.02
SSBP3-213ENST00000530618 H7BZZ5 65 aa2.42□□□□□ -2.02
SSBP3-213ENST00000530618 ACYP2P14621 99 aa2.42□□□□□ -2.02
SSBP3-213ENST00000530618 SPANXA2-OT1Q8N9U9 137 aa2.42□□□□□ -2.02
SSBP3-213ENST00000530618 SNURFQ9Y675 71 aa2.42□□□□□ -2.02
SSBP3-213ENST00000530618 MPLKIPQ8TAP9 179 aa2.41□□□□□ -2.02
SSBP3-213ENST00000530618 S4R3F8 94 aa2.41□□□□□ -2.02
SSBP3-213ENST00000530618 PRO0628Q9UI54 55 aa2.4□□□□□ -2.03
SSBP3-213ENST00000530618 DMAC1Q96GE9 116 aa2.39□□□□□ -2.03
SSBP3-213ENST00000530618 KRTAP19-4Q3LI73 84 aa2.38□□□□□ -2.03
SSBP3-213ENST00000530618 CSAG1Q6PB30 78 aa2.38□□□□□ -2.03
SSBP3-213ENST00000530618 NEBP20929 6669 aa2.35□□□□□ -2.03
SSBP3-213ENST00000530618 MT2AP02795 61 aa2.34□□□□□ -2.03
SSBP3-213ENST00000530618 SEC61GP60059 68 aa2.34□□□□□ -2.03
SSBP3-213ENST00000530618 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
SSBP3-213ENST00000530618 LCA10Q71F78 164 aa2.34□□□□□ -2.03
SSBP3-213ENST00000530618 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
SSBP3-213ENST00000530618 MT1FP04733 61 aa2.32□□□□□ -2.04
SSBP3-213ENST00000530618 COA5Q86WW8 74 aa2.32□□□□□ -2.04
SSBP3-213ENST00000530618 V9GYY9 64 aa2.32□□□□□ -2.04
SSBP3-213ENST00000530618 Q1T7F1 81 aa2.31□□□□□ -2.04
SSBP3-213ENST00000530618 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
SSBP3-213ENST00000530618 KRTAP3-1Q9BYR8 98 aa2.31□□□□□ -2.04
SSBP3-213ENST00000530618 H0YAA0 97 aa2.3□□□□□ -2.04
SSBP3-213ENST00000530618 PRR15LQ9BU68 103 aa2.29□□□□□ -2.04
SSBP3-213ENST00000530618 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
SSBP3-213ENST00000530618 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
SSBP3-213ENST00000530618 CRIPTQ9P021 101 aa2.27□□□□□ -2.05
SSBP3-213ENST00000530618 KRTAP19-6Q3LI70 58 aa2.26□□□□□ -2.05
SSBP3-213ENST00000530618 ADM2Q7Z4H4 148 aa2.26□□□□□ -2.05
SSBP3-213ENST00000530618 A0A1B0GU69 56 aa2.25□□□□□ -2.05
SSBP3-213ENST00000530618 PMAIP1Q13794 54 aa2.24□□□□□ -2.05
SSBP3-213ENST00000530618 R4GN34 69 aa2.24□□□□□ -2.05
SSBP3-213ENST00000530618 PSPHP1O15172 72 aa2.23□□□□□ -2.05
SSBP3-213ENST00000530618 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
SSBP3-213ENST00000530618 Q5VV11 94 aa2.22□□□□□ -2.05
SSBP3-213ENST00000530618 M0QZ58 72 aa2.21□□□□□ -2.06
SSBP3-213ENST00000530618 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
SSBP3-213ENST00000530618 LINC01558Q9Y6Z2 57 aa2.2□□□□□ -2.06
SSBP3-213ENST00000530618 KMT2DO14686 5537 aa2.19□□□□□ -2.06
SSBP3-213ENST00000530618 A0A1B0GU33 70 aa2.19□□□□□ -2.06
SSBP3-213ENST00000530618 A6NED7 52 aa2.19□□□□□ -2.06
SSBP3-213ENST00000530618 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
SSBP3-213ENST00000530618 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
SSBP3-213ENST00000530618 UQCR11O14957 56 aa2.17□□□□□ -2.06
SSBP3-213ENST00000530618 P0C880 135 aa2.17□□□□□ -2.06
SSBP3-213ENST00000530618 A6NN06 94 aa2.16□□□□□ -2.06
SSBP3-213ENST00000530618 LINC01554Q52M75 96 aa2.16□□□□□ -2.06
SSBP3-213ENST00000530618 PLAC4Q8WY50 150 aa2.16□□□□□ -2.06
SSBP3-213ENST00000530618 SPRR2GQ9BYE4 73 aa2.16□□□□□ -2.06
SSBP3-213ENST00000530618 K7ERS5 55 aa2.15□□□□□ -2.07
SSBP3-213ENST00000530618 PRO2289Q9P1D8 64 aa2.13□□□□□ -2.07
SSBP3-213ENST00000530618 MT1BP07438 61 aa2.12□□□□□ -2.07
SSBP3-213ENST00000530618 A8MU10 97 aa2.11□□□□□ -2.07
SSBP3-213ENST00000530618 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
SSBP3-213ENST00000530618 CAMK2N1Q7Z7J9 78 aa2.11□□□□□ -2.07
SSBP3-213ENST00000530618 A0A0D9SG42 100 aa2.1□□□□□ -2.07
SSBP3-213ENST00000530618 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms